RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MPNDQ8N594 471 aa17.39■□□□□ 0.37
TRAF4-214ENST00000580073 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
TRAF4-214ENST00000580073 GPRC5DQ9NZD1 345 aa17.39■□□□□ 0.37
TRAF4-214ENST00000580073 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
TRAF4-214ENST00000580073 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
TRAF4-214ENST00000580073 PSME4Q14997 1843 aa17.38■□□□□ 0.37
TRAF4-214ENST00000580073 EPS15P42566 896 aa17.38■□□□□ 0.37
TRAF4-214ENST00000580073 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
TRAF4-214ENST00000580073 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
TRAF4-214ENST00000580073 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-214ENST00000580073 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
TRAF4-214ENST00000580073 WBP1LQ9NX94 342 aa17.38■□□□□ 0.37
TRAF4-214ENST00000580073 ANXA1P04083 346 aa17.37■□□□□ 0.37
TRAF4-214ENST00000580073 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
TRAF4-214ENST00000580073 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
TRAF4-214ENST00000580073 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
TRAF4-214ENST00000580073 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
TRAF4-214ENST00000580073 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
TRAF4-214ENST00000580073 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
TRAF4-214ENST00000580073 DBF4Q9UBU7 674 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-214ENST00000580073 CHL1O00533 1208 aa17.36■□□□□ 0.37
TRAF4-214ENST00000580073 ANP32CO43423 234 aa17.36■□□□□ 0.37
TRAF4-214ENST00000580073 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
TRAF4-214ENST00000580073 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
TRAF4-214ENST00000580073 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-214ENST00000580073 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
TRAF4-214ENST00000580073 ZC3H15Q8WU90 426 aaKnown RBP17.35■□□□□ 0.37
TRAF4-214ENST00000580073 CAPNS2Q96L46 248 aa17.35■□□□□ 0.37
TRAF4-214ENST00000580073 CHMP4AQ9BY43 222 aa17.35■□□□□ 0.37
TRAF4-214ENST00000580073 CHPF2Q9P2E5 772 aa17.35■□□□□ 0.37
TRAF4-214ENST00000580073 CXCL9Q07325 125 aa17.34■□□□□ 0.37
TRAF4-214ENST00000580073 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
TRAF4-214ENST00000580073 HYPKQ9NX55 129 aa17.34■□□□□ 0.37
TRAF4-214ENST00000580073 GMPSP49915 693 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-214ENST00000580073 LBX1P52954 281 aa17.33■□□□□ 0.36
TRAF4-214ENST00000580073 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.36
TRAF4-214ENST00000580073 EYA3Q99504 573 aa17.33■□□□□ 0.36
TRAF4-214ENST00000580073 TLL2Q9Y6L7 1015 aa17.33■□□□□ 0.36
TRAF4-214ENST00000580073 CACNA1FO60840 1977 aa17.33■□□□□ 0.36
TRAF4-214ENST00000580073 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.36
TRAF4-214ENST00000580073 AKAP11Q9UKA4 1901 aa17.32■□□□□ 0.36
TRAF4-214ENST00000580073 H7C1D1 291 aa17.32■□□□□ 0.36
TRAF4-214ENST00000580073 CA12O43570 354 aa17.32■□□□□ 0.36
TRAF4-214ENST00000580073 HSPA8P11142 646 aaKnown RBP17.32■□□□□ 0.36
TRAF4-214ENST00000580073 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
TRAF4-214ENST00000580073 HHIPL1Q96JK4 782 aa17.32■□□□□ 0.36
TRAF4-214ENST00000580073 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
TRAF4-214ENST00000580073 SPEF2Q9C093 1822 aa17.32■□□□□ 0.36
TRAF4-214ENST00000580073 MAP2K2P36507 400 aa17.31■□□□□ 0.36
TRAF4-214ENST00000580073 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
TRAF4-214ENST00000580073 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
TRAF4-214ENST00000580073 WASHC4Q2M389 1173 aa17.3■□□□□ 0.36
TRAF4-214ENST00000580073 CDC37L1Q7L3B6 337 aa17.3■□□□□ 0.36
TRAF4-214ENST00000580073 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-214ENST00000580073 ISCA1Q9BUE6 129 aa17.3■□□□□ 0.36
TRAF4-214ENST00000580073 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
TRAF4-214ENST00000580073 RAD17O75943 681 aa17.29■□□□□ 0.36
TRAF4-214ENST00000580073 RPS12P25398 132 aaKnown RBP17.29■□□□□ 0.36
TRAF4-214ENST00000580073 GRM1Q13255 1194 aa17.29■□□□□ 0.36
TRAF4-214ENST00000580073 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
TRAF4-214ENST00000580073 PGAP2Q9UHJ9 254 aa17.29■□□□□ 0.36
TRAF4-214ENST00000580073 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
TRAF4-214ENST00000580073 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 TRAF5O00463 557 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
TRAF4-214ENST00000580073 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 CST9Q5W186 159 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 CYP4F22Q6NT55 531 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 MICALL2Q8IY33 904 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 DPF2Q92785 391 aa17.28■□□□□ 0.36
TRAF4-214ENST00000580073 CNOT7Q9UIV1 285 aaKnown RBP17.28■□□□□ 0.36
TRAF4-214ENST00000580073 NSFL1CQ9UNZ2 370 aaKnown RBP17.28■□□□□ 0.36
TRAF4-214ENST00000580073 C6orf229H3BNL8 230 aa17.27■□□□□ 0.36
TRAF4-214ENST00000580073 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
TRAF4-214ENST00000580073 GNAI1P63096 354 aa17.27■□□□□ 0.36
TRAF4-214ENST00000580073 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
TRAF4-214ENST00000580073 SAPCD2Q86UD0 394 aa17.27■□□□□ 0.36
TRAF4-214ENST00000580073 FAM89AQ96GI7 184 aa17.27■□□□□ 0.36
TRAF4-214ENST00000580073 IFT57Q9NWB7 429 aa17.27■□□□□ 0.36
TRAF4-214ENST00000580073 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
TRAF4-214ENST00000580073 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
TRAF4-214ENST00000580073 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
TRAF4-214ENST00000580073 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
TRAF4-214ENST00000580073 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
TRAF4-214ENST00000580073 ZNF408Q9H9D4 720 aa17.26■□□□□ 0.35
TRAF4-214ENST00000580073 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
TRAF4-214ENST00000580073 ZNF609O15014 1411 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 G3V3G9 751 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 ECE2O60344 883 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 CCDC152Q4G0S7 254 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 MIER1Q8N108 512 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
TRAF4-214ENST00000580073 DBNDD1Q9H9R9 158 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 CASP8AP2Q9UKL3 1982 aa17.25■□□□□ 0.35
TRAF4-214ENST00000580073 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAF4-214ENST00000580073 NOGQ13253 232 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms