RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SUCLG2Q96I99 432 aa19.55■□□□□ 0.72
SLC6A4-205ENST00000579221 BCS1LQ9Y276 419 aa19.55■□□□□ 0.72
SLC6A4-205ENST00000579221 ANKRD31Q8N7Z5 1873 aa19.54■□□□□ 0.72
SLC6A4-205ENST00000579221 GPR162Q16538 588 aa19.54■□□□□ 0.72
SLC6A4-205ENST00000579221 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
SLC6A4-205ENST00000579221 MEIS3Q99687 375 aa19.54■□□□□ 0.72
SLC6A4-205ENST00000579221 CHMP4BQ9H444 224 aaKnown RBP19.54■□□□□ 0.72
SLC6A4-205ENST00000579221 WWC3Q9ULE0 1092 aa19.54■□□□□ 0.72
SLC6A4-205ENST00000579221 ZBTB7BO15156 539 aaPredicted RBP19.53■□□□□ 0.72
SLC6A4-205ENST00000579221 BBOX1O75936 387 aa19.53■□□□□ 0.72
SLC6A4-205ENST00000579221 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
SLC6A4-205ENST00000579221 LMBR1LQ6UX01 489 aa19.53■□□□□ 0.72
SLC6A4-205ENST00000579221 CCDC85AQ96PX6 553 aaPredicted RBP19.53■□□□□ 0.72
SLC6A4-205ENST00000579221 COG6Q9Y2V7 657 aa19.53■□□□□ 0.72
SLC6A4-205ENST00000579221 SUPT16HQ9Y5B9 1047 aaKnown RBP19.53■□□□□ 0.72
SLC6A4-205ENST00000579221 GRAPQ13588 217 aa19.52■□□□□ 0.72
SLC6A4-205ENST00000579221 EPHA10Q5JZY3 1008 aa19.52■□□□□ 0.72
SLC6A4-205ENST00000579221 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
SLC6A4-205ENST00000579221 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.72
SLC6A4-205ENST00000579221 KAZALD1Q96I82 304 aa19.52■□□□□ 0.72
SLC6A4-205ENST00000579221 DDX19BQ9UMR2 479 aa19.52■□□□□ 0.72
SLC6A4-205ENST00000579221 CHMP3Q9Y3E7 222 aa19.52■□□□□ 0.72
SLC6A4-205ENST00000579221 GNAI2P04899 355 aa19.51■□□□□ 0.71
SLC6A4-205ENST00000579221 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
SLC6A4-205ENST00000579221 BICC1Q9H694 974 aaKnown RBP19.51■□□□□ 0.71
SLC6A4-205ENST00000579221 N4BP2Q86UW6 1770 aaPredicted RBP19.51■□□□□ 0.71
SLC6A4-205ENST00000579221 TNRC6CQ9HCJ0 1690 aaKnown RBP19.5■□□□□ 0.71
SLC6A4-205ENST00000579221 ANKRD18BA2A2Z9 1011 aa19.5■□□□□ 0.71
SLC6A4-205ENST00000579221 RPS8P62241 208 aaKnown RBP19.5■□□□□ 0.71
SLC6A4-205ENST00000579221 CDC5LQ99459 802 aaKnown RBP19.5■□□□□ 0.71
SLC6A4-205ENST00000579221 TMX4Q9H1E5 349 aaPredicted RBP19.5■□□□□ 0.71
SLC6A4-205ENST00000579221 GREM2Q9H772 168 aa19.5■□□□□ 0.71
SLC6A4-205ENST00000579221 SEC31BQ9NQW1 1179 aa19.5■□□□□ 0.71
SLC6A4-205ENST00000579221 RTL9Q8NET4 1388 aa19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 DDX60Q8IY21 1712 aaKnown RBP19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 GRIN3BO60391 1043 aa19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 ITGA6P23229 1130 aa19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 IFIT5Q13325 482 aaKnown RBP19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 CCDC57Q2TAC2 916 aa19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 RABL6Q3YEC7 729 aaPredicted RBP19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 TMC4Q7Z404 712 aa19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 ANKRD18AQ8IVF6 992 aa19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 LRRFIP2Q9Y608 721 aaKnown RBP19.49■□□□□ 0.71
SLC6A4-205ENST00000579221 PPEF1O14829 653 aaPredicted RBP19.48■□□□□ 0.71
SLC6A4-205ENST00000579221 C21orf2O43822 256 aa19.48■□□□□ 0.71
SLC6A4-205ENST00000579221 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
SLC6A4-205ENST00000579221 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
SLC6A4-205ENST00000579221 ANKRD44Q8N8A2 993 aa19.48■□□□□ 0.71
SLC6A4-205ENST00000579221 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
SLC6A4-205ENST00000579221 YBX3P16989 372 aaKnown RBP eCLIP19.47■□□□□ 0.71
SLC6A4-205ENST00000579221 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
SLC6A4-205ENST00000579221 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
SLC6A4-205ENST00000579221 CC2D2BQ6DHV5 1058 aa19.47■□□□□ 0.71
SLC6A4-205ENST00000579221 SP8Q8IXZ3 490 aa19.47■□□□□ 0.71
SLC6A4-205ENST00000579221 C7orf43Q8WVR3 580 aa19.47■□□□□ 0.71
SLC6A4-205ENST00000579221 TAF7LQ5H9L4 462 aa19.46■□□□□ 0.71
SLC6A4-205ENST00000579221 ATP6V0A2Q9Y487 856 aa19.46■□□□□ 0.71
SLC6A4-205ENST00000579221 LAMB2P55268 1798 aa19.46■□□□□ 0.71
SLC6A4-205ENST00000579221 COL11A2P13942 1736 aaPredicted RBP19.45■□□□□ 0.7
SLC6A4-205ENST00000579221 GRIPAP1Q4V328 841 aa19.45■□□□□ 0.7
SLC6A4-205ENST00000579221 ARHGAP27Q6ZUM4 889 aa19.45■□□□□ 0.7
SLC6A4-205ENST00000579221 MPHOSPH8Q99549 860 aa19.45■□□□□ 0.7
SLC6A4-205ENST00000579221 CCDC93Q567U6 631 aa19.44■□□□□ 0.7
SLC6A4-205ENST00000579221 RTKN2Q8IZC4 609 aa19.44■□□□□ 0.7
SLC6A4-205ENST00000579221 ZBTB40Q9NUA8 1239 aa19.44■□□□□ 0.7
SLC6A4-205ENST00000579221 BSDC1Q9NW68 430 aaPredicted RBP19.44■□□□□ 0.7
SLC6A4-205ENST00000579221 DLEC1Q9Y238 1755 aa19.44■□□□□ 0.7
SLC6A4-205ENST00000579221 ATP8B2P98198 1209 aa19.42■□□□□ 0.7
SLC6A4-205ENST00000579221 MTX1Q13505 466 aa19.41■□□□□ 0.7
SLC6A4-205ENST00000579221 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
SLC6A4-205ENST00000579221 ZNF594Q96JF6 807 aaPredicted RBP19.41■□□□□ 0.7
SLC6A4-205ENST00000579221 CRBNQ96SW2 442 aa19.41■□□□□ 0.7
SLC6A4-205ENST00000579221 C1orf115Q9H7X2 142 aa19.41■□□□□ 0.7
SLC6A4-205ENST00000579221 SLX4Q8IY92 1834 aa19.4■□□□□ 0.7
SLC6A4-205ENST00000579221 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
SLC6A4-205ENST00000579221 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
SLC6A4-205ENST00000579221 MPNDQ8N594 471 aa19.4■□□□□ 0.7
SLC6A4-205ENST00000579221 CNNM1Q9NRU3 951 aa19.4■□□□□ 0.7
SLC6A4-205ENST00000579221 BRCA1P38398 1863 aaKnown RBP19.39■□□□□ 0.7
SLC6A4-205ENST00000579221 RFX5P48382 616 aaPredicted RBP19.39■□□□□ 0.69
SLC6A4-205ENST00000579221 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.69
SLC6A4-205ENST00000579221 MINPP1Q9UNW1 487 aa19.39■□□□□ 0.69
SLC6A4-205ENST00000579221 MYH3P11055 1940 aa19.39■□□□□ 0.69
SLC6A4-205ENST00000579221 FKBP4Q02790 459 aaKnown RBP eCLIP19.38■□□□□ 0.69
SLC6A4-205ENST00000579221 PTPN12Q05209 780 aaKnown RBP19.38■□□□□ 0.69
SLC6A4-205ENST00000579221 DPP8Q6V1X1 898 aaPredicted RBP19.38■□□□□ 0.69
SLC6A4-205ENST00000579221 SUPT20HQ8NEM7 779 aa19.38■□□□□ 0.69
SLC6A4-205ENST00000579221 ANKRD2Q9GZV1 360 aa19.38■□□□□ 0.69
SLC6A4-205ENST00000579221 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
SLC6A4-205ENST00000579221 GPSM2P81274 684 aa19.37■□□□□ 0.69
SLC6A4-205ENST00000579221 AAMPQ13685 434 aa19.37■□□□□ 0.69
SLC6A4-205ENST00000579221 CEP85Q6P2H3 762 aa19.37■□□□□ 0.69
SLC6A4-205ENST00000579221 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
SLC6A4-205ENST00000579221 PSMD1Q99460 953 aa19.37■□□□□ 0.69
SLC6A4-205ENST00000579221 ANKIB1Q9P2G1 1089 aa19.37■□□□□ 0.69
SLC6A4-205ENST00000579221 FBXO3Q9UK99 471 aa19.37■□□□□ 0.69
SLC6A4-205ENST00000579221 SRCAPQ6ZRS2 3230 aa19.36■□□□□ 0.69
SLC6A4-205ENST00000579221 PNMA6EA0A0J9YXQ4 647 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms