RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 CXCL9Q07325 125 aa12.1□□□□□ -0.47
LINC00271-204ENST00000579057 DDX10Q13206 875 aaKnown RBP12.1□□□□□ -0.47
LINC00271-204ENST00000579057 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
LINC00271-204ENST00000579057 WBP1LQ9NX94 342 aa12.1□□□□□ -0.47
LINC00271-204ENST00000579057 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
LINC00271-204ENST00000579057 BBOX1O75936 387 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 CST9Q5W186 159 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 SP8Q8IXZ3 490 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 ZNF428Q96B54 188 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 ISCA1Q9BUE6 129 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 VPS33BQ9H267 617 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
LINC00271-204ENST00000579057 TRAF5O00463 557 aa12.08□□□□□ -0.48
LINC00271-204ENST00000579057 LMOD1P29536 600 aaPredicted RBP12.08□□□□□ -0.48
LINC00271-204ENST00000579057 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
LINC00271-204ENST00000579057 GRAPQ13588 217 aa12.08□□□□□ -0.48
LINC00271-204ENST00000579057 USP50Q70EL3 339 aaPredicted RBP12.08□□□□□ -0.48
LINC00271-204ENST00000579057 GRAPLQ8TC17 118 aaPredicted RBP12.08□□□□□ -0.48
LINC00271-204ENST00000579057 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
LINC00271-204ENST00000579057 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
LINC00271-204ENST00000579057 ZNRF3Q9ULT6 936 aa12.08□□□□□ -0.48
LINC00271-204ENST00000579057 SH3TC1Q8TE82 1336 aa12.08□□□□□ -0.48
LINC00271-204ENST00000579057 YDJCA8MPS7 323 aa12.07□□□□□ -0.48
LINC00271-204ENST00000579057 HOXB7P09629 217 aa12.07□□□□□ -0.48
LINC00271-204ENST00000579057 ZNF853P0CG23 659 aa12.07□□□□□ -0.48
LINC00271-204ENST00000579057 GMPSP49915 693 aaPredicted RBP12.07□□□□□ -0.48
LINC00271-204ENST00000579057 DEFB115Q30KQ5 88 aa12.07□□□□□ -0.48
LINC00271-204ENST00000579057 DPP8Q6V1X1 898 aaPredicted RBP12.07□□□□□ -0.48
LINC00271-204ENST00000579057 MPNDQ8N594 471 aa12.07□□□□□ -0.48
LINC00271-204ENST00000579057 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
LINC00271-204ENST00000579057 WDR33Q9C0J8 1336 aaKnown RBP12.07□□□□□ -0.48
LINC00271-204ENST00000579057 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
LINC00271-204ENST00000579057 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
LINC00271-204ENST00000579057 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 CTCFP49711 727 aaPredicted RBP12.06□□□□□ -0.48
LINC00271-204ENST00000579057 HIRAP54198 1017 aaPredicted RBP12.06□□□□□ -0.48
LINC00271-204ENST00000579057 HDGFL1Q5TGJ6 251 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 DDX46Q7L014 1031 aaKnown RBP12.06□□□□□ -0.48
LINC00271-204ENST00000579057 SUPT20HQ8NEM7 779 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
LINC00271-204ENST00000579057 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 ADARB2Q9NS39 739 aaKnown RBP12.06□□□□□ -0.48
LINC00271-204ENST00000579057 MBIPQ9NS73 344 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
LINC00271-204ENST00000579057 LAS1LQ9Y4W2 734 aaKnown RBP12.06□□□□□ -0.48
LINC00271-204ENST00000579057 RAD17O75943 681 aa12.05□□□□□ -0.48
LINC00271-204ENST00000579057 HSPA8P11142 646 aaKnown RBP12.05□□□□□ -0.48
LINC00271-204ENST00000579057 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
LINC00271-204ENST00000579057 DUSP27Q5VZP5 1158 aa12.05□□□□□ -0.48
LINC00271-204ENST00000579057 TRPM4Q8TD43 1214 aa12.05□□□□□ -0.48
LINC00271-204ENST00000579057 FAM89AQ96GI7 184 aa12.05□□□□□ -0.48
LINC00271-204ENST00000579057 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
LINC00271-204ENST00000579057 ABT1Q9ULW3 272 aaKnown RBP12.05□□□□□ -0.48
LINC00271-204ENST00000579057 LBX1P52954 281 aa12.04□□□□□ -0.48
LINC00271-204ENST00000579057 TRIM28Q13263 835 aaKnown RBP12.04□□□□□ -0.48
LINC00271-204ENST00000579057 POLA2Q14181 598 aa12.04□□□□□ -0.48
LINC00271-204ENST00000579057 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC00271-204ENST00000579057 CIAPIN1Q6FI81 312 aa12.04□□□□□ -0.48
LINC00271-204ENST00000579057 CAPNS2Q96L46 248 aa12.04□□□□□ -0.48
LINC00271-204ENST00000579057 GLIS2Q9BZE0 524 aaPredicted RBP12.04□□□□□ -0.48
LINC00271-204ENST00000579057 PRKRIP1Q9H875 184 aaPredicted RBP12.04□□□□□ -0.48
LINC00271-204ENST00000579057 CDHR2Q9BYE9 1310 aa12.04□□□□□ -0.48
LINC00271-204ENST00000579057 KCNA4P22459 653 aa12.03□□□□□ -0.48
LINC00271-204ENST00000579057 CYP4F22Q6NT55 531 aa12.03□□□□□ -0.48
LINC00271-204ENST00000579057 TMC4Q7Z404 712 aa12.03□□□□□ -0.48
LINC00271-204ENST00000579057 AIDAQ96BJ3 306 aa12.03□□□□□ -0.48
LINC00271-204ENST00000579057 TMX4Q9H1E5 349 aaPredicted RBP12.03□□□□□ -0.48
LINC00271-204ENST00000579057 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
LINC00271-204ENST00000579057 TLL2Q9Y6L7 1015 aa12.03□□□□□ -0.48
LINC00271-204ENST00000579057 GPSM2P81274 684 aa12.02□□□□□ -0.49
LINC00271-204ENST00000579057 SAPCD2Q86UD0 394 aa12.02□□□□□ -0.49
LINC00271-204ENST00000579057 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
LINC00271-204ENST00000579057 KCNQ5Q9NR82 932 aa12.02□□□□□ -0.49
LINC00271-204ENST00000579057 HYPKQ9NX55 129 aa12.02□□□□□ -0.49
LINC00271-204ENST00000579057 RTL9Q8NET4 1388 aa12.02□□□□□ -0.49
LINC00271-204ENST00000579057 PSMD14O00487 310 aa12.01□□□□□ -0.49
LINC00271-204ENST00000579057 IRS4O14654 1257 aaPredicted RBP12.01□□□□□ -0.49
LINC00271-204ENST00000579057 APAF1O14727 1248 aa12.01□□□□□ -0.49
LINC00271-204ENST00000579057 EGFRP00533 1210 aa12.01□□□□□ -0.49
LINC00271-204ENST00000579057 MAP2K1Q02750 393 aaPredicted RBP12.01□□□□□ -0.49
LINC00271-204ENST00000579057 TNIP1Q15025 636 aa12.01□□□□□ -0.49
LINC00271-204ENST00000579057 RTL5Q5HYW3 569 aaPredicted RBP12.01□□□□□ -0.49
LINC00271-204ENST00000579057 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
LINC00271-204ENST00000579057 ZC3H15Q8WU90 426 aaKnown RBP12.01□□□□□ -0.49
LINC00271-204ENST00000579057 GPR101Q96P66 508 aaPredicted RBP12.01□□□□□ -0.49
LINC00271-204ENST00000579057 DBNDD1Q9H9R9 158 aa12.01□□□□□ -0.49
LINC00271-204ENST00000579057 CNOT7Q9UIV1 285 aaKnown RBP12.01□□□□□ -0.49
LINC00271-204ENST00000579057 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
LINC00271-204ENST00000579057 PSME4Q14997 1843 aa12.01□□□□□ -0.49
LINC00271-204ENST00000579057 AOC2O75106 756 aa12□□□□□ -0.49
LINC00271-204ENST00000579057 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
LINC00271-204ENST00000579057 MICALL2Q8IY33 904 aa12□□□□□ -0.49
LINC00271-204ENST00000579057 C8orf58Q8NAV2 365 aa12□□□□□ -0.49
LINC00271-204ENST00000579057 BCL2L13Q9BXK5 485 aa12□□□□□ -0.49
LINC00271-204ENST00000579057 SEC31BQ9NQW1 1179 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms