RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
TRAF4-213ENST00000578917 ZC3H4Q9UPT8 1303 aaKnown RBP8.3□□□□□ -1.08
TRAF4-213ENST00000578917 LAMB4A4D0S4 1761 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 H7C1W4 665 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 PPIP5K2O43314 1243 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 PRELPP51888 382 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 ANKRD18AQ8IVF6 992 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 NIM1KQ8IY84 436 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 SSH1Q8WYL5 1049 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 SRCIN1Q9C0H9 1055 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 CHMP3Q9Y3E7 222 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 GJA3Q9Y6H8 435 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 ADCY9O60503 1353 aa8.3□□□□□ -1.08
TRAF4-213ENST00000578917 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
TRAF4-213ENST00000578917 KIF13BQ9NQT8 1826 aa8.29□□□□□ -1.08
TRAF4-213ENST00000578917 TOMM70O94826 608 aa8.29□□□□□ -1.08
TRAF4-213ENST00000578917 DDNO94850 711 aaPredicted RBP8.29□□□□□ -1.08
TRAF4-213ENST00000578917 CT47B1P0C2W7 299 aaPredicted RBP8.29□□□□□ -1.08
TRAF4-213ENST00000578917 CTSWP56202 376 aa8.29□□□□□ -1.08
TRAF4-213ENST00000578917 WASHC4Q2M389 1173 aa8.29□□□□□ -1.08
TRAF4-213ENST00000578917 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
TRAF4-213ENST00000578917 CELF1Q92879 486 aaKnown RBP8.29□□□□□ -1.08
TRAF4-213ENST00000578917 CDC5LQ99459 802 aaKnown RBP8.29□□□□□ -1.08
TRAF4-213ENST00000578917 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
TRAF4-213ENST00000578917 NRXN2Q9P2S2 1712 aa8.29□□□□□ -1.08
TRAF4-213ENST00000578917 RIC1Q4ADV7 1423 aa8.29□□□□□ -1.08
TRAF4-213ENST00000578917 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 ALDH1L1O75891 902 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 IGHMBP2P38935 993 aaKnown RBP8.28□□□□□ -1.08
TRAF4-213ENST00000578917 AOC3Q16853 763 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 ALDH1L2Q3SY69 923 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 TAF7LQ5H9L4 462 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 BEND3Q5T5X7 828 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 TTLL11Q8NHH1 800 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 EYA3Q99504 573 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 MPHOSPH8Q99549 860 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
TRAF4-213ENST00000578917 VPS33BQ9H267 617 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 PTPRCP08575 1304 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 CDHR2Q9BYE9 1310 aa8.28□□□□□ -1.08
TRAF4-213ENST00000578917 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
TRAF4-213ENST00000578917 ANKRD18BA2A2Z9 1011 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 GRM8O00222 908 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 KIF3CO14782 793 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 IPO8O15397 1037 aaKnown RBP8.27□□□□□ -1.09
TRAF4-213ENST00000578917 LMOD1P29536 600 aaPredicted RBP8.27□□□□□ -1.09
TRAF4-213ENST00000578917 GPSM2P81274 684 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 IFIT5Q13325 482 aaKnown RBP8.27□□□□□ -1.09
TRAF4-213ENST00000578917 TNIP1Q15025 636 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 CCDC57Q2TAC2 916 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 TRMT2AQ8IZ69 625 aaKnown RBP8.27□□□□□ -1.09
TRAF4-213ENST00000578917 FRAT1Q92837 279 aaPredicted RBP8.27□□□□□ -1.09
TRAF4-213ENST00000578917 GREM2Q9H772 168 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 GGA1Q9UJY5 639 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 ZNRF3Q9ULT6 936 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 NOB1Q9ULX3 412 aaKnown RBP8.27□□□□□ -1.09
TRAF4-213ENST00000578917 CLEC11AQ9Y240 323 aa8.27□□□□□ -1.09
TRAF4-213ENST00000578917 NUP98P52948 1817 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 UFL1O94874 794 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 ITGA6P23229 1130 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 KCNJ4P48050 445 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 EAPPQ56P03 285 aaPredicted RBP8.26□□□□□ -1.09
TRAF4-213ENST00000578917 LMBR1LQ6UX01 489 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 SLC51AQ86UW1 340 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 GPC2Q8N158 579 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
TRAF4-213ENST00000578917 RTFDC1Q9BY42 306 aaPredicted RBP8.26□□□□□ -1.09
TRAF4-213ENST00000578917 API5Q9BZZ5 524 aaKnown RBP8.26□□□□□ -1.09
TRAF4-213ENST00000578917 BSDC1Q9NW68 430 aaPredicted RBP8.26□□□□□ -1.09
TRAF4-213ENST00000578917 KIAA1551Q9HCM1 1747 aa8.26□□□□□ -1.09
TRAF4-213ENST00000578917 FZD9O00144 591 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 PLIN1O60240 522 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 RAD17O75943 681 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 CCT4P50991 539 aaKnown RBP8.25□□□□□ -1.09
TRAF4-213ENST00000578917 RARSP54136 660 aaKnown RBP8.25□□□□□ -1.09
TRAF4-213ENST00000578917 KIAA2012Q0VF49 1180 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 SMC1BQ8NDV3 1235 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 TBC1D16Q8TBP0 767 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 POLLQ9UGP5 575 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 HACL1Q9UJ83 578 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 XDHP47989 1333 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 ZNF541Q9H0D2 1346 aa8.25□□□□□ -1.09
TRAF4-213ENST00000578917 SLX4Q8IY92 1834 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 ANKRD31Q8N7Z5 1873 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 CSF1RP07333 972 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 NBPF7P0C2Y1 421 aaPredicted RBP8.24□□□□□ -1.09
TRAF4-213ENST00000578917 ATP2B4P23634 1241 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 CXCL9Q07325 125 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 FSTL1Q12841 308 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 FAM161AQ3B820 660 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 CIAPIN1Q6FI81 312 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 LDHAL6AQ6ZMR3 332 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 PNMA8AQ86V59 439 aaPredicted RBP8.24□□□□□ -1.09
TRAF4-213ENST00000578917 GPR101Q96P66 508 aaPredicted RBP8.24□□□□□ -1.09
TRAF4-213ENST00000578917 DBNDD1Q9H9R9 158 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms