RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
RN7SL560P-201ENST00000577943 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
RN7SL560P-201ENST00000577943 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
RN7SL560P-201ENST00000577943 C8orf58Q8NAV2 365 aa19.31■□□□□ 0.68
RN7SL560P-201ENST00000577943 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
RN7SL560P-201ENST00000577943 TRIM28Q13263 835 aaKnown RBP19.3■□□□□ 0.68
RN7SL560P-201ENST00000577943 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
RN7SL560P-201ENST00000577943 CHMP4AQ9BY43 222 aa19.3■□□□□ 0.68
RN7SL560P-201ENST00000577943 MKRN1Q9UHC7 482 aaKnown RBP19.3■□□□□ 0.68
RN7SL560P-201ENST00000577943 LRRC37AA6NMS7 1700 aa19.3■□□□□ 0.68
RN7SL560P-201ENST00000577943 ITGBL1O95965 494 aaPredicted RBP19.29■□□□□ 0.68
RN7SL560P-201ENST00000577943 EPS15P42566 896 aa19.29■□□□□ 0.68
RN7SL560P-201ENST00000577943 SCNN1DP51172 638 aa19.29■□□□□ 0.68
RN7SL560P-201ENST00000577943 SF3B3Q15393 1217 aaKnown RBP19.29■□□□□ 0.68
RN7SL560P-201ENST00000577943 CCDC30Q5VVM6 783 aa19.29■□□□□ 0.68
RN7SL560P-201ENST00000577943 MAP1SQ66K74 1059 aaPredicted RBP19.29■□□□□ 0.68
RN7SL560P-201ENST00000577943 CNTROBQ8N137 903 aa19.29■□□□□ 0.68
RN7SL560P-201ENST00000577943 TRPM7Q96QT4 1865 aa19.28■□□□□ 0.68
RN7SL560P-201ENST00000577943 TMEM88BA6NKF7 163 aa19.28■□□□□ 0.68
RN7SL560P-201ENST00000577943 IRS4O14654 1257 aaPredicted RBP19.28■□□□□ 0.68
RN7SL560P-201ENST00000577943 MYD88Q99836 296 aa19.28■□□□□ 0.68
RN7SL560P-201ENST00000577943 ZNRF3Q9ULT6 936 aa19.28■□□□□ 0.68
RN7SL560P-201ENST00000577943 HSPA1AP0DMV8 641 aaKnown RBP19.27■□□□□ 0.68
RN7SL560P-201ENST00000577943 HSPA1BP0DMV9 641 aaKnown RBP19.27■□□□□ 0.68
RN7SL560P-201ENST00000577943 KIAA2012Q0VF49 1180 aa19.27■□□□□ 0.68
RN7SL560P-201ENST00000577943 CELF1Q92879 486 aaKnown RBP19.27■□□□□ 0.68
RN7SL560P-201ENST00000577943 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
RN7SL560P-201ENST00000577943 DDX58O95786 925 aaKnown RBP19.26■□□□□ 0.67
RN7SL560P-201ENST00000577943 CXCL9Q07325 125 aa19.26■□□□□ 0.67
RN7SL560P-201ENST00000577943 TSPYL6Q8N831 410 aa19.26■□□□□ 0.67
RN7SL560P-201ENST00000577943 ZBTB38Q8NAP3 1195 aaPredicted RBP19.26■□□□□ 0.67
RN7SL560P-201ENST00000577943 MYH3P11055 1940 aa19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 DUOX1Q9NRD9 1551 aa19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 CNTNAP1P78357 1384 aa19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 HSP90B1P14625 803 aaKnown RBP19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 CIAPIN1Q6FI81 312 aa19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 USP50Q70EL3 339 aaPredicted RBP19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 TSR2Q969E8 191 aaKnown RBP19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 NSFL1CQ9UNZ2 370 aaKnown RBP19.25■□□□□ 0.67
RN7SL560P-201ENST00000577943 ANP32CO43423 234 aa19.24■□□□□ 0.67
RN7SL560P-201ENST00000577943 CCDC27Q2M243 656 aa19.24■□□□□ 0.67
RN7SL560P-201ENST00000577943 WWC1Q8IX03 1113 aa19.24■□□□□ 0.67
RN7SL560P-201ENST00000577943 CCDC191Q8NCU4 936 aa19.24■□□□□ 0.67
RN7SL560P-201ENST00000577943 MRS2Q9HD23 443 aa19.24■□□□□ 0.67
RN7SL560P-201ENST00000577943 GPRC5DQ9NZD1 345 aa19.24■□□□□ 0.67
RN7SL560P-201ENST00000577943 COL4A1P02462 1669 aa19.24■□□□□ 0.67
RN7SL560P-201ENST00000577943 ZNF316A6NFI3 1004 aaPredicted RBP19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 RAD17O75943 681 aa19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 TNIP1Q15025 636 aa19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 COL13A1Q5TAT6 717 aaPredicted RBP19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 METTL22Q9BUU2 404 aaPredicted RBP19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 STK31Q9BXU1 1019 aa19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 ADARB2Q9NS39 739 aaKnown RBP19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 CWC25Q9NXE8 425 aaPredicted RBP19.23■□□□□ 0.67
RN7SL560P-201ENST00000577943 PCCAP05165 728 aaPredicted RBP19.22■□□□□ 0.67
RN7SL560P-201ENST00000577943 GMPSP49915 693 aaPredicted RBP19.22■□□□□ 0.67
RN7SL560P-201ENST00000577943 RPS8P62241 208 aaKnown RBP19.22■□□□□ 0.67
RN7SL560P-201ENST00000577943 WASHC4Q2M389 1173 aa19.22■□□□□ 0.67
RN7SL560P-201ENST00000577943 MAP3K2Q9Y2U5 619 aa19.22■□□□□ 0.67
RN7SL560P-201ENST00000577943 C6orf229H3BNL8 230 aa19.21■□□□□ 0.67
RN7SL560P-201ENST00000577943 PDE8AO60658 829 aa19.21■□□□□ 0.67
RN7SL560P-201ENST00000577943 JARID2Q92833 1246 aaPredicted RBP19.21■□□□□ 0.67
RN7SL560P-201ENST00000577943 POLR2AP24928 1970 aaKnown RBP19.21■□□□□ 0.67
RN7SL560P-201ENST00000577943 YDJCA8MPS7 323 aa19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 RIMBP2O15034 1052 aa19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 GPSM2P81274 684 aa19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 TWISTNBQ3B726 338 aaPredicted RBP19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 CCDC152Q4G0S7 254 aa19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 KSR2Q6VAB6 950 aa19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 SEC31BQ9NQW1 1179 aa19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
RN7SL560P-201ENST00000577943 SPEF2Q9C093 1822 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 PI4KAP2A4QPH2 592 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 VEGFBP49765 207 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 DEFB115Q30KQ5 88 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 PI4KAP1Q8N8J0 262 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 EYA3Q99504 573 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 DBNDD1Q9H9R9 158 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 ABT1Q9ULW3 272 aaKnown RBP19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 IL16Q14005 1332 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 CDHR2Q9BYE9 1310 aa19.19■□□□□ 0.66
RN7SL560P-201ENST00000577943 FMR1Q06787 632 aaKnown RBP eCLIP19.18■□□□□ 0.66
RN7SL560P-201ENST00000577943 NEXNQ0ZGT2 675 aa19.18■□□□□ 0.66
RN7SL560P-201ENST00000577943 CCDC85AQ96PX6 553 aaPredicted RBP19.18■□□□□ 0.66
RN7SL560P-201ENST00000577943 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
RN7SL560P-201ENST00000577943 RASSF10A6NK89 507 aa19.17■□□□□ 0.66
RN7SL560P-201ENST00000577943 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
RN7SL560P-201ENST00000577943 TBC1D16Q8TBP0 767 aa19.17■□□□□ 0.66
RN7SL560P-201ENST00000577943 ANKIB1Q9P2G1 1089 aa19.17■□□□□ 0.66
RN7SL560P-201ENST00000577943 CNOT7Q9UIV1 285 aaKnown RBP19.17■□□□□ 0.66
RN7SL560P-201ENST00000577943 SCN9AQ15858 1988 aa19.17■□□□□ 0.66
RN7SL560P-201ENST00000577943 H7C1D1 291 aa19.16■□□□□ 0.66
RN7SL560P-201ENST00000577943 TRAF5O00463 557 aa19.16■□□□□ 0.66
RN7SL560P-201ENST00000577943 PSMD14O00487 310 aa19.16■□□□□ 0.66
RN7SL560P-201ENST00000577943 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
RN7SL560P-201ENST00000577943 IGKV5-2P06315 115 aa19.16■□□□□ 0.66
RN7SL560P-201ENST00000577943 ECE2O60344 883 aa19.15■□□□□ 0.66
RN7SL560P-201ENST00000577943 DOK7Q18PE1 504 aa19.15■□□□□ 0.66
RN7SL560P-201ENST00000577943 ANKRD18AQ8IVF6 992 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms