RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 ADAMTSL1Q8N6G6 1762 aa17.52■□□□□ 0.4
CUEDC1-204ENST00000577497 IL16Q14005 1332 aa17.51■□□□□ 0.39
CUEDC1-204ENST00000577497 G2E3Q7L622 706 aa17.51■□□□□ 0.39
CUEDC1-204ENST00000577497 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
CUEDC1-204ENST00000577497 RTFDC1Q9BY42 306 aaPredicted RBP17.51■□□□□ 0.39
CUEDC1-204ENST00000577497 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
CUEDC1-204ENST00000577497 MAP3K2Q9Y2U5 619 aa17.51■□□□□ 0.39
CUEDC1-204ENST00000577497 GJA3Q9Y6H8 435 aa17.51■□□□□ 0.39
CUEDC1-204ENST00000577497 PCNTO95613 3336 aa17.5■□□□□ 0.39
CUEDC1-204ENST00000577497 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
CUEDC1-204ENST00000577497 DPP8Q6V1X1 898 aaPredicted RBP17.5■□□□□ 0.39
CUEDC1-204ENST00000577497 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
CUEDC1-204ENST00000577497 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
CUEDC1-204ENST00000577497 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
CUEDC1-204ENST00000577497 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
CUEDC1-204ENST00000577497 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 EPHX2P34913 555 aa17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 SCNN1DP51172 638 aa17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 EIF6P56537 245 aaKnown RBP17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 LDHDQ86WU2 507 aa17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 NIM1KQ8IY84 436 aa17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 MPNDQ8N594 471 aa17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
CUEDC1-204ENST00000577497 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
CUEDC1-204ENST00000577497 IGKV5-2P06315 115 aa17.48■□□□□ 0.39
CUEDC1-204ENST00000577497 KSR2Q6VAB6 950 aa17.48■□□□□ 0.39
CUEDC1-204ENST00000577497 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
CUEDC1-204ENST00000577497 STK31Q9BXU1 1019 aa17.48■□□□□ 0.39
CUEDC1-204ENST00000577497 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
CUEDC1-204ENST00000577497 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
CUEDC1-204ENST00000577497 KIAA2012Q0VF49 1180 aa17.47■□□□□ 0.39
CUEDC1-204ENST00000577497 SUPT20HQ8NEM7 779 aa17.47■□□□□ 0.39
CUEDC1-204ENST00000577497 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
CUEDC1-204ENST00000577497 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
CUEDC1-204ENST00000577497 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
CUEDC1-204ENST00000577497 EPS15P42566 896 aa17.46■□□□□ 0.39
CUEDC1-204ENST00000577497 CXCL9Q07325 125 aa17.46■□□□□ 0.39
CUEDC1-204ENST00000577497 CWF19L2Q2TBE0 894 aaKnown RBP17.46■□□□□ 0.39
CUEDC1-204ENST00000577497 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
CUEDC1-204ENST00000577497 CCDC85AQ96PX6 553 aaPredicted RBP17.46■□□□□ 0.39
CUEDC1-204ENST00000577497 GPSM2P81274 684 aa17.45■□□□□ 0.38
CUEDC1-204ENST00000577497 EXOSC9Q06265 439 aaKnown RBP17.45■□□□□ 0.38
CUEDC1-204ENST00000577497 TMC4Q7Z404 712 aa17.45■□□□□ 0.38
CUEDC1-204ENST00000577497 CHMP4AQ9BY43 222 aa17.45■□□□□ 0.38
CUEDC1-204ENST00000577497 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
CUEDC1-204ENST00000577497 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
CUEDC1-204ENST00000577497 YDJCA8MPS7 323 aa17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 VAMP4O75379 141 aa17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 GPR101Q96P66 508 aaPredicted RBP17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 NSFL1CQ9UNZ2 370 aaKnown RBP17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
CUEDC1-204ENST00000577497 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
CUEDC1-204ENST00000577497 PDE8AO60658 829 aa17.43■□□□□ 0.38
CUEDC1-204ENST00000577497 RAD17O75943 681 aa17.43■□□□□ 0.38
CUEDC1-204ENST00000577497 RPS8P62241 208 aaKnown RBP17.43■□□□□ 0.38
CUEDC1-204ENST00000577497 FLIIQ13045 1269 aa17.43■□□□□ 0.38
CUEDC1-204ENST00000577497 PNMA8AQ86V59 439 aaPredicted RBP17.43■□□□□ 0.38
CUEDC1-204ENST00000577497 CDHR2Q9BYE9 1310 aa17.43■□□□□ 0.38
CUEDC1-204ENST00000577497 LMOD1P29536 600 aaPredicted RBP17.42■□□□□ 0.38
CUEDC1-204ENST00000577497 RIMBP2O15034 1052 aa17.41■□□□□ 0.38
CUEDC1-204ENST00000577497 GMPSP49915 693 aaPredicted RBP17.41■□□□□ 0.38
CUEDC1-204ENST00000577497 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
CUEDC1-204ENST00000577497 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
CUEDC1-204ENST00000577497 DBNDD1Q9H9R9 158 aa17.41■□□□□ 0.38
CUEDC1-204ENST00000577497 CREBZFQ9NS37 354 aa17.41■□□□□ 0.38
CUEDC1-204ENST00000577497 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
CUEDC1-204ENST00000577497 SHTN1A0MZ66 631 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 CTSWP56202 376 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 NEXNQ0ZGT2 675 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 FKBP5Q13451 457 aaPredicted RBP17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 CIAPIN1Q6FI81 312 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 CNTROBQ8N137 903 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 ZNF521Q96K83 1311 aa17.4■□□□□ 0.38
CUEDC1-204ENST00000577497 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
CUEDC1-204ENST00000577497 FMR1Q06787 632 aaKnown RBP eCLIP17.39■□□□□ 0.37
CUEDC1-204ENST00000577497 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
CUEDC1-204ENST00000577497 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
CUEDC1-204ENST00000577497 GREM2Q9H772 168 aa17.39■□□□□ 0.37
CUEDC1-204ENST00000577497 KCNQ5Q9NR82 932 aa17.39■□□□□ 0.37
CUEDC1-204ENST00000577497 MKRN1Q9UHC7 482 aaKnown RBP17.39■□□□□ 0.37
CUEDC1-204ENST00000577497 SPEF2Q9C093 1822 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 H7C1W4 665 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 GCKRQ14397 625 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 DNAAF4Q8WXU2 420 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 MYH3P11055 1940 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 RTL9Q8NET4 1388 aa17.38■□□□□ 0.37
CUEDC1-204ENST00000577497 WTIPA6NIX2 430 aaPredicted RBP17.37■□□□□ 0.37
CUEDC1-204ENST00000577497 F6X3S4 739 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms