RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	OLFM4	Q6UX06	510 aa		32.21	■■■□□ 2.75
SRRM2-223	ENST00000575701	ZNF526	Q8TF50	670 aa	Predicted RBP	32.21	■■■□□ 2.75
SRRM2-223	ENST00000575701	GCKR	Q14397	625 aa		32.2	■■■□□ 2.75
SRRM2-223	ENST00000575701	MRPL50	Q8N5N7	158 aa	Known RBP	32.19	■■■□□ 2.74
SRRM2-223	ENST00000575701	KDM2B	Q8NHM5	1336 aa		32.19	■■■□□ 2.74
SRRM2-223	ENST00000575701	CCDC152	Q4G0S7	254 aa		32.18	■■■□□ 2.74
SRRM2-223	ENST00000575701	SP8	Q8IXZ3	490 aa		32.18	■■■□□ 2.74
SRRM2-223	ENST00000575701	PTPRC	P08575	1304 aa		32.18	■■■□□ 2.74
SRRM2-223	ENST00000575701		F6X3S4	739 aa		32.17	■■■□□ 2.74
SRRM2-223	ENST00000575701		H7C1W4	665 aa		32.17	■■■□□ 2.74
SRRM2-223	ENST00000575701	SSH1	Q8WYL5	1049 aa		32.17	■■■□□ 2.74
SRRM2-223	ENST00000575701	BEND3	Q5T5X7	828 aa		32.16	■■■□□ 2.74
SRRM2-223	ENST00000575701	MYH3	P11055	1940 aa		32.16	■■■□□ 2.74
SRRM2-223	ENST00000575701	LRRC37A	A6NMS7	1700 aa		32.15	■■■□□ 2.74
SRRM2-223	ENST00000575701	UBE3B	Q7Z3V4	1068 aa		32.15	■■■□□ 2.74
SRRM2-223	ENST00000575701	JARID2	Q92833	1246 aa	Predicted RBP	32.15	■■■□□ 2.74
SRRM2-223	ENST00000575701	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.14	■■■□□ 2.74
SRRM2-223	ENST00000575701	TAF1	P21675	1872 aa		32.14	■■■□□ 2.74
SRRM2-223	ENST00000575701	IARS	P41252	1262 aa	Known RBP	32.13	■■■□□ 2.73
SRRM2-223	ENST00000575701	CTSW	P56202	376 aa		32.13	■■■□□ 2.73
SRRM2-223	ENST00000575701	CELF1	Q92879	486 aa	Known RBP	32.12	■■■□□ 2.73
SRRM2-223	ENST00000575701	PLA2G12B	Q9BX93	195 aa		32.12	■■■□□ 2.73
SRRM2-223	ENST00000575701	SMC4	Q9NTJ3	1288 aa		32.12	■■■□□ 2.73
SRRM2-223	ENST00000575701	GLTPD2	A6NH11	291 aa		32.11	■■■□□ 2.73
SRRM2-223	ENST00000575701	ALDH1L1	O75891	902 aa		32.11	■■■□□ 2.73
SRRM2-223	ENST00000575701	DPY19L2	Q6NUT2	758 aa		32.11	■■■□□ 2.73
SRRM2-223	ENST00000575701	SUPT20H	Q8NEM7	779 aa		32.11	■■■□□ 2.73
SRRM2-223	ENST00000575701	VPS33B	Q9H267	617 aa		32.11	■■■□□ 2.73
SRRM2-223	ENST00000575701	RTL9	Q8NET4	1388 aa		32.1	■■■□□ 2.73
SRRM2-223	ENST00000575701	CASP7	P55210	303 aa		32.1	■■■□□ 2.73
SRRM2-223	ENST00000575701	RPS8	P62241	208 aa	Known RBP	32.1	■■■□□ 2.73
SRRM2-223	ENST00000575701	SLC4A10	Q6U841	1118 aa		32.1	■■■□□ 2.73
SRRM2-223	ENST00000575701	SRCIN1	Q9C0H9	1055 aa		32.1	■■■□□ 2.73
SRRM2-223	ENST00000575701	ZBED9	Q6R2W3	1325 aa		32.09	■■■□□ 2.73
SRRM2-223	ENST00000575701	DPP8	Q6V1X1	898 aa	Predicted RBP	32.09	■■■□□ 2.73
SRRM2-223	ENST00000575701	MPND	Q8N594	471 aa		32.09	■■■□□ 2.73
SRRM2-223	ENST00000575701	BCL2L13	Q9BXK5	485 aa		32.09	■■■□□ 2.73
SRRM2-223	ENST00000575701	TTLL11	Q8NHH1	800 aa		32.08	■■■□□ 2.73
SRRM2-223	ENST00000575701	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.08	■■■□□ 2.73
SRRM2-223	ENST00000575701	BRPF1	P55201	1214 aa	Predicted RBP	32.07	■■■□□ 2.72
SRRM2-223	ENST00000575701	SEC31B	Q9NQW1	1179 aa		32.07	■■■□□ 2.72
SRRM2-223	ENST00000575701	KIF3C	O14782	793 aa		32.06	■■■□□ 2.72
SRRM2-223	ENST00000575701	SLC51A	Q86UW1	340 aa		32.06	■■■□□ 2.72
SRRM2-223	ENST00000575701	JDP2	Q8WYK2	163 aa		32.06	■■■□□ 2.72
SRRM2-223	ENST00000575701	CDC5L	Q99459	802 aa	Known RBP	32.06	■■■□□ 2.72
SRRM2-223	ENST00000575701	NMRK2	Q9NPI5	230 aa		32.06	■■■□□ 2.72
SRRM2-223	ENST00000575701	COL4A1	P02462	1669 aa		32.05	■■■□□ 2.72
SRRM2-223	ENST00000575701	GRM8	O00222	908 aa		32.04	■■■□□ 2.72
SRRM2-223	ENST00000575701	ANKRD18A	Q8IVF6	992 aa		32.04	■■■□□ 2.72
SRRM2-223	ENST00000575701	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.04	■■■□□ 2.72
SRRM2-223	ENST00000575701	WDR90	Q96KV7	1748 aa		32.03	■■■□□ 2.72
SRRM2-223	ENST00000575701	LARGE2	Q8N3Y3	721 aa		32.03	■■■□□ 2.72
SRRM2-223	ENST00000575701	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.03	■■■□□ 2.72
SRRM2-223	ENST00000575701	RARS	P54136	660 aa	Known RBP	32.02	■■■□□ 2.72
SRRM2-223	ENST00000575701	GREM2	Q9H772	168 aa		32.02	■■■□□ 2.72
SRRM2-223	ENST00000575701	DUOX1	Q9NRD9	1551 aa		32.02	■■■□□ 2.72
SRRM2-223	ENST00000575701	FZD9	O00144	591 aa		32.01	■■■□□ 2.71
SRRM2-223	ENST00000575701	PPIP5K2	O43314	1243 aa		32.01	■■■□□ 2.71
SRRM2-223	ENST00000575701	CSF1R	P07333	972 aa		32.01	■■■□□ 2.71
SRRM2-223	ENST00000575701	C1QTNF8	P60827	252 aa		32.01	■■■□□ 2.71
SRRM2-223	ENST00000575701	KIF16B	Q96L93	1317 aa		32	■■■□□ 2.71
SRRM2-223	ENST00000575701	LTBP1	Q14766	1721 aa		32	■■■□□ 2.71
SRRM2-223	ENST00000575701	NSFL1C	Q9UNZ2	370 aa	Known RBP	32	■■■□□ 2.71
SRRM2-223	ENST00000575701	NIM1K	Q8IY84	436 aa		31.99	■■■□□ 2.71
SRRM2-223	ENST00000575701	RRAGC	Q9HB90	399 aa		31.99	■■■□□ 2.71
SRRM2-223	ENST00000575701	COL4A5	P29400	1685 aa		31.99	■■■□□ 2.71
SRRM2-223	ENST00000575701	VEGFA	P15692	232 aa	Predicted RBP	31.98	■■■□□ 2.71
SRRM2-223	ENST00000575701	KIAA2012	Q0VF49	1180 aa		31.98	■■■□□ 2.71
SRRM2-223	ENST00000575701	API5	Q9BZZ5	524 aa	Known RBP	31.98	■■■□□ 2.71
SRRM2-223	ENST00000575701	AOC3	Q16853	763 aa		31.97	■■■□□ 2.71
SRRM2-223	ENST00000575701	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.97	■■■□□ 2.71
SRRM2-223	ENST00000575701	PODXL2	Q9NZ53	605 aa		31.97	■■■□□ 2.71
SRRM2-223	ENST00000575701	UTY	O14607	1347 aa		31.97	■■■□□ 2.71
SRRM2-223	ENST00000575701	TOMM70	O94826	608 aa		31.96	■■■□□ 2.71
SRRM2-223	ENST00000575701	EIF6	P56537	245 aa	Known RBP	31.96	■■■□□ 2.71
SRRM2-223	ENST00000575701	GPSM2	P81274	684 aa		31.96	■■■□□ 2.71
SRRM2-223	ENST00000575701	BSDC1	Q9NW68	430 aa	Predicted RBP	31.96	■■■□□ 2.71
SRRM2-223	ENST00000575701	NOB1	Q9ULX3	412 aa	Known RBP	31.96	■■■□□ 2.71
SRRM2-223	ENST00000575701	ZNF541	Q9H0D2	1346 aa		31.96	■■■□□ 2.71
SRRM2-223	ENST00000575701	DDN	O94850	711 aa	Predicted RBP	31.95	■■■□□ 2.71
SRRM2-223	ENST00000575701	ITGA6	P23229	1130 aa		31.95	■■■□□ 2.71
SRRM2-223	ENST00000575701	IGHMBP2	P38935	993 aa	Known RBP	31.95	■■■□□ 2.71
SRRM2-223	ENST00000575701	FOXO4	P98177	505 aa		31.95	■■■□□ 2.71
SRRM2-223	ENST00000575701	FAM161A	Q3B820	660 aa		31.95	■■■□□ 2.71
SRRM2-223	ENST00000575701	ARHGAP45	Q92619	1136 aa		31.95	■■■□□ 2.71
SRRM2-223	ENST00000575701	EYA3	Q99504	573 aa		31.95	■■■□□ 2.71
SRRM2-223	ENST00000575701	SPEF2	Q9C093	1822 aa		31.94	■■■□□ 2.7
SRRM2-223	ENST00000575701	L3MBTL3	Q96JM7	780 aa	Predicted RBP	31.94	■■■□□ 2.7
SRRM2-223	ENST00000575701	CCT4	P50991	539 aa	Known RBP	31.93	■■■□□ 2.7
SRRM2-223	ENST00000575701	GPC2	Q8N158	579 aa		31.93	■■■□□ 2.7
SRRM2-223	ENST00000575701	ANKIB1	Q9P2G1	1089 aa		31.93	■■■□□ 2.7
SRRM2-223	ENST00000575701	ANKRD18B	A2A2Z9	1011 aa		31.92	■■■□□ 2.7
SRRM2-223	ENST00000575701	C6orf229	H3BNL8	230 aa		31.92	■■■□□ 2.7
SRRM2-223	ENST00000575701	WASHC4	Q2M389	1173 aa		31.92	■■■□□ 2.7
SRRM2-223	ENST00000575701	XDH	P47989	1333 aa		31.92	■■■□□ 2.7
SRRM2-223	ENST00000575701	SCN4A	P35499	1836 aa		31.91	■■■□□ 2.7
SRRM2-223	ENST00000575701	IQCA1L	A6NCM1	817 aa		31.91	■■■□□ 2.7
SRRM2-223	ENST00000575701	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.91	■■■□□ 2.7
SRRM2-223	ENST00000575701	IFIT5	Q13325	482 aa	Known RBP	31.91	■■■□□ 2.7
SRRM2-223	ENST00000575701	TBC1D16	Q8TBP0	767 aa		31.91	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms