RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, human

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TVP23B-208	ENST00000575261	SP8	Q8IXZ3	490 aa		13.62	□□□□□ -0.23
TVP23B-208	ENST00000575261	GRAPL	Q8TC17	118 aa	Predicted RBP	13.62	□□□□□ -0.23
TVP23B-208	ENST00000575261	ADARB2	Q9NS39	739 aa	Known RBP	13.62	□□□□□ -0.23
TVP23B-208	ENST00000575261	ZNRF3	Q9ULT6	936 aa		13.62	□□□□□ -0.23
TVP23B-208	ENST00000575261	TRIM35	Q9UPQ4	493 aa		13.62	□□□□□ -0.23
TVP23B-208	ENST00000575261	DUOX1	Q9NRD9	1551 aa		13.62	□□□□□ -0.23
TVP23B-208	ENST00000575261	CDHR2	Q9BYE9	1310 aa		13.62	□□□□□ -0.23
TVP23B-208	ENST00000575261	KIAA2012	Q0VF49	1180 aa		13.61	□□□□□ -0.23
TVP23B-208	ENST00000575261	TMC4	Q7Z404	712 aa		13.61	□□□□□ -0.23
TVP23B-208	ENST00000575261	MPND	Q8N594	471 aa		13.61	□□□□□ -0.23
TVP23B-208	ENST00000575261	PRDM10	Q9NQV6	1147 aa		13.61	□□□□□ -0.23
TVP23B-208	ENST00000575261	GPRC5D	Q9NZD1	345 aa		13.61	□□□□□ -0.23
TVP23B-208	ENST00000575261	CXCL9	Q07325	125 aa		13.6	□□□□□ -0.23
TVP23B-208	ENST00000575261	PLBD2	Q8NHP8	589 aa		13.6	□□□□□ -0.23
TVP23B-208	ENST00000575261	WBP1L	Q9NX94	342 aa		13.6	□□□□□ -0.23
TVP23B-208	ENST00000575261	DBF4	Q9UBU7	674 aa	Predicted RBP	13.6	□□□□□ -0.23
TVP23B-208	ENST00000575261	WDR33	Q9C0J8	1336 aa	Known RBP	13.6	□□□□□ -0.23
TVP23B-208	ENST00000575261	TAF1	P21675	1872 aa		13.59	□□□□□ -0.23
TVP23B-208	ENST00000575261	CIAPIN1	Q6FI81	312 aa		13.59	□□□□□ -0.23
TVP23B-208	ENST00000575261	ANKRD13D	Q6ZTN6	518 aa		13.59	□□□□□ -0.23
TVP23B-208	ENST00000575261	CFAP44	Q96MT7	982 aa		13.59	□□□□□ -0.23
TVP23B-208	ENST00000575261	GMPS	P49915	693 aa	Predicted RBP	13.58	□□□□□ -0.24
TVP23B-208	ENST00000575261	MAP2K1	Q02750	393 aa	Predicted RBP	13.58	□□□□□ -0.24
TVP23B-208	ENST00000575261	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.58	□□□□□ -0.24
TVP23B-208	ENST00000575261	ISCA1	Q9BUE6	129 aa		13.58	□□□□□ -0.24
TVP23B-208	ENST00000575261	HYPK	Q9NX55	129 aa		13.58	□□□□□ -0.24
TVP23B-208	ENST00000575261	ADAMTS8	Q9UP79	889 aa		13.58	□□□□□ -0.24
TVP23B-208	ENST00000575261	TRAF5	O00463	557 aa		13.57	□□□□□ -0.24
TVP23B-208	ENST00000575261	RAD17	O75943	681 aa		13.57	□□□□□ -0.24
TVP23B-208	ENST00000575261	ECE1	P42892	770 aa		13.57	□□□□□ -0.24
TVP23B-208	ENST00000575261	FMR1	Q06787	632 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
TVP23B-208	ENST00000575261	TNIP1	Q15025	636 aa		13.57	□□□□□ -0.24
TVP23B-208	ENST00000575261	ZNF428	Q96B54	188 aa		13.57	□□□□□ -0.24
TVP23B-208	ENST00000575261	BCL2L13	Q9BXK5	485 aa		13.57	□□□□□ -0.24
TVP23B-208	ENST00000575261	ATP5J2-PTCD1	G3V325	749 aa		13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	LBX1	P52954	281 aa		13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	SF3B3	Q15393	1217 aa	Known RBP	13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	DUSP27	Q5VZP5	1158 aa		13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	FAM89A	Q96GI7	184 aa		13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	CAPNS2	Q96L46	248 aa		13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	MBIP	Q9NS73	344 aa		13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	TLL2	Q9Y6L7	1015 aa		13.56	□□□□□ -0.24
TVP23B-208	ENST00000575261	YDJC	A8MPS7	323 aa		13.55	□□□□□ -0.24
TVP23B-208	ENST00000575261	HSPA8	P11142	646 aa	Known RBP	13.55	□□□□□ -0.24
TVP23B-208	ENST00000575261	CALD1	Q05682	793 aa	Known RBP	13.55	□□□□□ -0.24
TVP23B-208	ENST00000575261	CST9	Q5W186	159 aa		13.55	□□□□□ -0.24
TVP23B-208	ENST00000575261	ZC3H15	Q8WU90	426 aa	Known RBP	13.55	□□□□□ -0.24
TVP23B-208	ENST00000575261	COL4A1	P02462	1669 aa		13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	IRS4	O14654	1257 aa	Predicted RBP	13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	CELF2	O95319	508 aa	Known RBP	13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	GOLGA2	Q08379	1002 aa		13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	GRM1	Q13255	1194 aa		13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	TRIM28	Q13263	835 aa	Known RBP	13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	WASHC4	Q2M389	1173 aa		13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	CYP4F22	Q6NT55	531 aa		13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	CELF1	Q92879	486 aa	Known RBP	13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	GPR101	Q96P66	508 aa	Predicted RBP	13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	BEGAIN	Q9BUH8	593 aa		13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	IFT57	Q9NWB7	429 aa		13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.54	□□□□□ -0.24
TVP23B-208	ENST00000575261		H7C1D1	291 aa		13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	ZNF853	P0CG23	659 aa		13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	HSP90B1	P14625	803 aa	Known RBP	13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	RTL5	Q5HYW3	569 aa	Predicted RBP	13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	RIC3	Q7Z5B4	369 aa		13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	TRPM4	Q8TD43	1214 aa		13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	PGAP2	Q9UHJ9	254 aa		13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	CNOT7	Q9UIV1	285 aa	Known RBP	13.53	□□□□□ -0.24
TVP23B-208	ENST00000575261	C6orf229	H3BNL8	230 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	APAF1	O14727	1248 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	GNAI1	P63096	354 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	SAPCD2	Q86UD0	394 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	MICALL2	Q8IY33	904 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	HHIPL1	Q96JK4	782 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	EYA3	Q99504	573 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	DBNDD1	Q9H9R9	158 aa		13.52	□□□□□ -0.25
TVP23B-208	ENST00000575261	PSMD14	O00487	310 aa		13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	MAP2K2	P36507	400 aa		13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	HIRA	P54198	1017 aa	Predicted RBP	13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	GPSM2	P81274	684 aa		13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	CDC37L1	Q7L3B6	337 aa		13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	DPF2	Q92785	391 aa		13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	ZNF408	Q9H9D4	720 aa		13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	POLL	Q9UGP5	575 aa		13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.51	□□□□□ -0.25
TVP23B-208	ENST00000575261	SHTN1	A0MZ66	631 aa		13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	RIMBP2	O15034	1052 aa		13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	ECE2	O60344	883 aa		13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	RPS12	P25398	132 aa	Known RBP	13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	RPS8	P62241	208 aa	Known RBP	13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	CCDC191	Q8NCU4	936 aa		13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	MYD88	Q99836	296 aa		13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	CHMP4A	Q9BY43	222 aa		13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	PHAX	Q9H814	394 aa	Known RBP	13.5	□□□□□ -0.25
TVP23B-208	ENST00000575261	RTL9	Q8NET4	1388 aa		13.49	□□□□□ -0.25
TVP23B-208	ENST00000575261	ELL2	O00472	640 aa	Predicted RBP	13.49	□□□□□ -0.25
TVP23B-208	ENST00000575261	AOC2	O75106	756 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms