RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
SMG6-216ENST00000575176 PCNTO95613 3336 aa11.14□□□□□ -0.63
SMG6-216ENST00000575176 ZNF541Q9H0D2 1346 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 NPHP1O15259 732 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 DDX58O95786 925 aaKnown RBP11.13□□□□□ -0.63
SMG6-216ENST00000575176 ALDH1B1P30837 517 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 GRAPQ13588 217 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 GCKRQ14397 625 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
SMG6-216ENST00000575176 GRAPLQ8TC17 118 aaPredicted RBP11.13□□□□□ -0.63
SMG6-216ENST00000575176 NLRP3Q96P20 1036 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 RTFDC1Q9BY42 306 aaPredicted RBP11.13□□□□□ -0.63
SMG6-216ENST00000575176 NMRK2Q9NPI5 230 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
SMG6-216ENST00000575176 GTF2E1P29083 439 aaPredicted RBP11.12□□□□□ -0.63
SMG6-216ENST00000575176 BRPF1P55201 1214 aaPredicted RBP11.12□□□□□ -0.63
SMG6-216ENST00000575176 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
SMG6-216ENST00000575176 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
SMG6-216ENST00000575176 LINS1Q8NG48 757 aa11.12□□□□□ -0.63
SMG6-216ENST00000575176 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
SMG6-216ENST00000575176 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
SMG6-216ENST00000575176 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
SMG6-216ENST00000575176 CHMP4AQ9BY43 222 aa11.12□□□□□ -0.63
SMG6-216ENST00000575176 SEC31BQ9NQW1 1179 aa11.12□□□□□ -0.63
SMG6-216ENST00000575176 UTYO14607 1347 aa11.11□□□□□ -0.63
SMG6-216ENST00000575176 ZBED9Q6R2W3 1325 aa11.11□□□□□ -0.63
SMG6-216ENST00000575176 CTSWP56202 376 aa11.11□□□□□ -0.63
SMG6-216ENST00000575176 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
SMG6-216ENST00000575176 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
SMG6-216ENST00000575176 FZD9O00144 591 aa11.1□□□□□ -0.63
SMG6-216ENST00000575176 PDE8AO60658 829 aa11.1□□□□□ -0.63
SMG6-216ENST00000575176 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
SMG6-216ENST00000575176 EPHA10Q5JZY3 1008 aa11.1□□□□□ -0.63
SMG6-216ENST00000575176 UBE3BQ7Z3V4 1068 aa11.1□□□□□ -0.63
SMG6-216ENST00000575176 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
SMG6-216ENST00000575176 ZNF526Q8TF50 670 aaPredicted RBP11.1□□□□□ -0.63
SMG6-216ENST00000575176 BCL2L13Q9BXK5 485 aa11.1□□□□□ -0.63
SMG6-216ENST00000575176 IRS2Q9Y4H2 1338 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 CSF1RP07333 972 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 IARSP41252 1262 aaKnown RBP11.09□□□□□ -0.63
SMG6-216ENST00000575176 FOXO4P98177 505 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 CC2D2BQ6DHV5 1058 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 SP8Q8IXZ3 490 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 RTKN2Q8IZC4 609 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 GREM2Q9H772 168 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 ZNF609O15014 1411 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 PTPRCP08575 1304 aa11.09□□□□□ -0.63
SMG6-216ENST00000575176 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
SMG6-216ENST00000575176 BBOX1O75936 387 aa11.08□□□□□ -0.64
SMG6-216ENST00000575176 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
SMG6-216ENST00000575176 RARSP54136 660 aaKnown RBP11.08□□□□□ -0.64
SMG6-216ENST00000575176 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
SMG6-216ENST00000575176 DDX46Q7L014 1031 aaKnown RBP11.08□□□□□ -0.64
SMG6-216ENST00000575176 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
SMG6-216ENST00000575176 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
SMG6-216ENST00000575176 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 C1QTNF8P60827 252 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 GPSM2P81274 684 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 HNRNPUQ00839 825 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMG6-216ENST00000575176 NEXNQ0ZGT2 675 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 POLLQ9UGP5 575 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 TNNQ9UQP3 1299 aa11.07□□□□□ -0.64
SMG6-216ENST00000575176 GRM8O00222 908 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 ALDH1L1O75891 902 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 NBPF7P0C2Y1 421 aaPredicted RBP11.06□□□□□ -0.64
SMG6-216ENST00000575176 KIAA2012Q0VF49 1180 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 AOC3Q16853 763 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 TMC4Q7Z404 712 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 ANKRD44Q8N8A2 993 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 CCDC85AQ96PX6 553 aaPredicted RBP11.06□□□□□ -0.64
SMG6-216ENST00000575176 TRPM7Q96QT4 1865 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 THSD7BQ9C0I4 1608 aa11.06□□□□□ -0.64
SMG6-216ENST00000575176 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
SMG6-216ENST00000575176 RPS8P62241 208 aaKnown RBP11.05□□□□□ -0.64
SMG6-216ENST00000575176 RABL6Q3YEC7 729 aaPredicted RBP11.05□□□□□ -0.64
SMG6-216ENST00000575176 CCDC152Q4G0S7 254 aa11.05□□□□□ -0.64
SMG6-216ENST00000575176 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
SMG6-216ENST00000575176 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
SMG6-216ENST00000575176 GPR101Q96P66 508 aaPredicted RBP11.05□□□□□ -0.64
SMG6-216ENST00000575176 SMC4Q9NTJ3 1288 aa11.05□□□□□ -0.64
SMG6-216ENST00000575176 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
SMG6-216ENST00000575176 POTEIP0CG38 1075 aa11.04□□□□□ -0.64
SMG6-216ENST00000575176 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
SMG6-216ENST00000575176 SCNN1DP51172 638 aa11.04□□□□□ -0.64
SMG6-216ENST00000575176 TBC1D16Q8TBP0 767 aa11.04□□□□□ -0.64
SMG6-216ENST00000575176 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
SMG6-216ENST00000575176 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
SMG6-216ENST00000575176 BCAR3O75815 825 aa11.03□□□□□ -0.64
SMG6-216ENST00000575176 ITGA6P23229 1130 aa11.03□□□□□ -0.64
SMG6-216ENST00000575176 DPP8Q6V1X1 898 aaPredicted RBP11.03□□□□□ -0.64
SMG6-216ENST00000575176 MPNDQ8N594 471 aa11.03□□□□□ -0.64
SMG6-216ENST00000575176 SRCIN1Q9C0H9 1055 aa11.03□□□□□ -0.64
SMG6-216ENST00000575176 VPS33BQ9H267 617 aa11.03□□□□□ -0.64
SMG6-216ENST00000575176 PPIP5K2O43314 1243 aa11.02□□□□□ -0.65
SMG6-216ENST00000575176 TRIM27P14373 513 aa11.02□□□□□ -0.65
SMG6-216ENST00000575176 KLRK1P26718 216 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms