RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 ISCA1Q9BUE6 129 aa19.78■□□□□ 0.76
CTNS-209ENST00000574776 HYPKQ9NX55 129 aa19.78■□□□□ 0.76
CTNS-209ENST00000574776 ZNRF3Q9ULT6 936 aa19.78■□□□□ 0.76
CTNS-209ENST00000574776 ZNF853P0CG23 659 aa19.77■□□□□ 0.76
CTNS-209ENST00000574776 VEGFBP49765 207 aa19.77■□□□□ 0.76
CTNS-209ENST00000574776 CXCL9Q07325 125 aa19.77■□□□□ 0.76
CTNS-209ENST00000574776 TAF1P21675 1872 aa19.77■□□□□ 0.76
CTNS-209ENST00000574776 LTBP1Q14766 1721 aa19.76■□□□□ 0.75
CTNS-209ENST00000574776 ELL2O00472 640 aaPredicted RBP19.76■□□□□ 0.75
CTNS-209ENST00000574776 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
CTNS-209ENST00000574776 FMR1Q06787 632 aaKnown RBP eCLIP19.75■□□□□ 0.75
CTNS-209ENST00000574776 USP50Q70EL3 339 aaPredicted RBP19.75■□□□□ 0.75
CTNS-209ENST00000574776 CAPN15O75808 1086 aa19.74■□□□□ 0.75
CTNS-209ENST00000574776 KIAA2012Q0VF49 1180 aa19.74■□□□□ 0.75
CTNS-209ENST00000574776 DEFB115Q30KQ5 88 aa19.74■□□□□ 0.75
CTNS-209ENST00000574776 IFT57Q9NWB7 429 aa19.74■□□□□ 0.75
CTNS-209ENST00000574776 GPRC5DQ9NZD1 345 aa19.74■□□□□ 0.75
CTNS-209ENST00000574776 RAD17O75943 681 aa19.73■□□□□ 0.75
CTNS-209ENST00000574776 GNAI1P63096 354 aa19.73■□□□□ 0.75
CTNS-209ENST00000574776 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
CTNS-209ENST00000574776 TMC4Q7Z404 712 aa19.73■□□□□ 0.75
CTNS-209ENST00000574776 RIC3Q7Z5B4 369 aa19.73■□□□□ 0.75
CTNS-209ENST00000574776 PHAXQ9H814 394 aaKnown RBP19.73■□□□□ 0.75
CTNS-209ENST00000574776 ABT1Q9ULW3 272 aaKnown RBP19.73■□□□□ 0.75
CTNS-209ENST00000574776 GMPSP49915 693 aaPredicted RBP19.72■□□□□ 0.75
CTNS-209ENST00000574776 CALD1Q05682 793 aaKnown RBP19.72■□□□□ 0.75
CTNS-209ENST00000574776 TRIM28Q13263 835 aaKnown RBP19.72■□□□□ 0.75
CTNS-209ENST00000574776 CIAPIN1Q6FI81 312 aa19.72■□□□□ 0.75
CTNS-209ENST00000574776 CELF1Q92879 486 aaKnown RBP19.72■□□□□ 0.75
CTNS-209ENST00000574776 ADARB2Q9NS39 739 aaKnown RBP19.72■□□□□ 0.75
CTNS-209ENST00000574776 RASSF10A6NK89 507 aa19.71■□□□□ 0.75
CTNS-209ENST00000574776 IRS4O14654 1257 aaPredicted RBP19.71■□□□□ 0.75
CTNS-209ENST00000574776 FOXN1O15353 648 aa19.71■□□□□ 0.75
CTNS-209ENST00000574776 C8orf58Q8NAV2 365 aa19.71■□□□□ 0.75
CTNS-209ENST00000574776 BCL2L13Q9BXK5 485 aa19.71■□□□□ 0.75
CTNS-209ENST00000574776 NSFL1CQ9UNZ2 370 aaKnown RBP19.71■□□□□ 0.75
CTNS-209ENST00000574776 TRAF5O00463 557 aa19.7■□□□□ 0.74
CTNS-209ENST00000574776 GOLGA2Q08379 1002 aa19.7■□□□□ 0.74
CTNS-209ENST00000574776 TNIP1Q15025 636 aa19.7■□□□□ 0.74
CTNS-209ENST00000574776 DDX60Q8IY21 1712 aaKnown RBP19.7■□□□□ 0.74
CTNS-209ENST00000574776 YDJCA8MPS7 323 aa19.69■□□□□ 0.74
CTNS-209ENST00000574776 WASHC4Q2M389 1173 aa19.69■□□□□ 0.74
CTNS-209ENST00000574776 CST9Q5W186 159 aa19.69■□□□□ 0.74
CTNS-209ENST00000574776 RIMBP2O15034 1052 aa19.68■□□□□ 0.74
CTNS-209ENST00000574776 RPS8P62241 208 aaKnown RBP19.68■□□□□ 0.74
CTNS-209ENST00000574776 GPSM2P81274 684 aa19.68■□□□□ 0.74
CTNS-209ENST00000574776 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
CTNS-209ENST00000574776 MYD88Q99836 296 aa19.68■□□□□ 0.74
CTNS-209ENST00000574776 WBP1LQ9NX94 342 aa19.68■□□□□ 0.74
CTNS-209ENST00000574776 WDR33Q9C0J8 1336 aaKnown RBP19.68■□□□□ 0.74
CTNS-209ENST00000574776 C6orf229H3BNL8 230 aa19.67■□□□□ 0.74
CTNS-209ENST00000574776 CCDC184Q52MB2 194 aa19.67■□□□□ 0.74
CTNS-209ENST00000574776 ZBTB38Q8NAP3 1195 aaPredicted RBP19.67■□□□□ 0.74
CTNS-209ENST00000574776 JARID2Q92833 1246 aaPredicted RBP19.67■□□□□ 0.74
CTNS-209ENST00000574776 POLLQ9UGP5 575 aa19.67■□□□□ 0.74
CTNS-209ENST00000574776 CNOT7Q9UIV1 285 aaKnown RBP19.67■□□□□ 0.74
CTNS-209ENST00000574776 HIRAP54198 1017 aaPredicted RBP19.66■□□□□ 0.74
CTNS-209ENST00000574776 DBNDD1Q9H9R9 158 aa19.66■□□□□ 0.74
CTNS-209ENST00000574776 SEC31BQ9NQW1 1179 aa19.66■□□□□ 0.74
CTNS-209ENST00000574776 SHTN1A0MZ66 631 aa19.65■□□□□ 0.74
CTNS-209ENST00000574776 CTCFP49711 727 aaPredicted RBP19.65■□□□□ 0.74
CTNS-209ENST00000574776 CCDC30Q5VVM6 783 aa19.65■□□□□ 0.74
CTNS-209ENST00000574776 PAXIP1Q6ZW49 1069 aaPredicted RBP19.65■□□□□ 0.74
CTNS-209ENST00000574776 TSPYL6Q8N831 410 aa19.65■□□□□ 0.74
CTNS-209ENST00000574776 PGAP2Q9UHJ9 254 aa19.65■□□□□ 0.74
CTNS-209ENST00000574776 ZBTB12Q9Y330 459 aaPredicted RBP19.65■□□□□ 0.74
CTNS-209ENST00000574776 DUOX1Q9NRD9 1551 aa19.65■□□□□ 0.74
CTNS-209ENST00000574776 COL4A1P02462 1669 aa19.65■□□□□ 0.74
CTNS-209ENST00000574776 H7C1D1 291 aa19.64■□□□□ 0.73
CTNS-209ENST00000574776 DOK7Q18PE1 504 aa19.64■□□□□ 0.73
CTNS-209ENST00000574776 CCDC191Q8NCU4 936 aa19.64■□□□□ 0.73
CTNS-209ENST00000574776 TRPM4Q8TD43 1214 aa19.64■□□□□ 0.73
CTNS-209ENST00000574776 GPR101Q96P66 508 aaPredicted RBP19.64■□□□□ 0.73
CTNS-209ENST00000574776 METTL22Q9BUU2 404 aaPredicted RBP19.64■□□□□ 0.73
CTNS-209ENST00000574776 GLIS2Q9BZE0 524 aaPredicted RBP19.64■□□□□ 0.73
CTNS-209ENST00000574776 PRDM10Q9NQV6 1147 aa19.64■□□□□ 0.73
CTNS-209ENST00000574776 KCNQ5Q9NR82 932 aa19.64■□□□□ 0.73
CTNS-209ENST00000574776 CDHR2Q9BYE9 1310 aa19.64■□□□□ 0.73
CTNS-209ENST00000574776 LRRC37AA6NMS7 1700 aa19.63■□□□□ 0.73
CTNS-209ENST00000574776 PSMD14O00487 310 aa19.63■□□□□ 0.73
CTNS-209ENST00000574776 PCCAP05165 728 aaPredicted RBP19.63■□□□□ 0.73
CTNS-209ENST00000574776 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
CTNS-209ENST00000574776 GRM1Q13255 1194 aa19.63■□□□□ 0.73
CTNS-209ENST00000574776 CYP4F22Q6NT55 531 aa19.63■□□□□ 0.73
CTNS-209ENST00000574776 TBC1D16Q8TBP0 767 aa19.63■□□□□ 0.73
CTNS-209ENST00000574776 ZC3H15Q8WU90 426 aaKnown RBP19.63■□□□□ 0.73
CTNS-209ENST00000574776 CAPNS2Q96L46 248 aa19.63■□□□□ 0.73
CTNS-209ENST00000574776 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
CTNS-209ENST00000574776 CWC25Q9NXE8 425 aaPredicted RBP19.63■□□□□ 0.73
CTNS-209ENST00000574776 TRPM7Q96QT4 1865 aa19.62■□□□□ 0.73
CTNS-209ENST00000574776 CELF2O95319 508 aaKnown RBP19.62■□□□□ 0.73
CTNS-209ENST00000574776 DDX58O95786 925 aaKnown RBP19.62■□□□□ 0.73
CTNS-209ENST00000574776 LBX1P52954 281 aa19.62■□□□□ 0.73
CTNS-209ENST00000574776 MAP2K1Q02750 393 aaPredicted RBP19.62■□□□□ 0.73
CTNS-209ENST00000574776 MICALL2Q8IY33 904 aa19.62■□□□□ 0.73
CTNS-209ENST00000574776 TSR2Q969E8 191 aaKnown RBP19.62■□□□□ 0.73
CTNS-209ENST00000574776 CCDC85AQ96PX6 553 aaPredicted RBP19.62■□□□□ 0.73
CTNS-209ENST00000574776 EYA3Q99504 573 aa19.62■□□□□ 0.73
CTNS-209ENST00000574776 TLL2Q9Y6L7 1015 aa19.62■□□□□ 0.73
CTNS-209ENST00000574776 ECE2O60344 883 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms