RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-215	ENST00000574095	SCN4A	P35499	1836 aa		33.48	■■■□□ 2.95
NPLOC4-215	ENST00000574095	PI4KAP2	A4QPH2	592 aa		33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	IQCA1L	A6NCM1	817 aa		33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	SLC4A2	P04920	1241 aa		33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	POTEI	P0CG38	1075 aa		33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	POTEJ	P0CG39	1038 aa		33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	PI4KAP1	Q8N8J0	262 aa		33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	JARID2	Q92833	1246 aa	Predicted RBP	33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	CWC25	Q9NXE8	425 aa	Predicted RBP	33.47	■■■□□ 2.95
NPLOC4-215	ENST00000574095	PPIP5K2	O43314	1243 aa		33.46	■■■□□ 2.95
NPLOC4-215	ENST00000574095	EIF6	P56537	245 aa	Known RBP	33.46	■■■□□ 2.95
NPLOC4-215	ENST00000574095	DPP8	Q6V1X1	898 aa	Predicted RBP	33.46	■■■□□ 2.95
NPLOC4-215	ENST00000574095	MPND	Q8N594	471 aa		33.46	■■■□□ 2.95
NPLOC4-215	ENST00000574095	CELF1	Q92879	486 aa	Known RBP	33.46	■■■□□ 2.95
NPLOC4-215	ENST00000574095	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.46	■■■□□ 2.95
NPLOC4-215	ENST00000574095	EXOSC9	Q06265	439 aa	Known RBP	33.45	■■■□□ 2.95
NPLOC4-215	ENST00000574095	AOC3	Q16853	763 aa		33.45	■■■□□ 2.95
NPLOC4-215	ENST00000574095	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.45	■■■□□ 2.95
NPLOC4-215	ENST00000574095	PCCA	P05165	728 aa	Predicted RBP	33.44	■■■□□ 2.94
NPLOC4-215	ENST00000574095	GPC2	Q8N158	579 aa		33.44	■■■□□ 2.94
NPLOC4-215	ENST00000574095	DNAJC5G	Q8N7S2	189 aa		33.44	■■■□□ 2.94
NPLOC4-215	ENST00000574095	SUPT20H	Q8NEM7	779 aa		33.44	■■■□□ 2.94
NPLOC4-215	ENST00000574095	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.44	■■■□□ 2.94
NPLOC4-215	ENST00000574095	GJA3	Q9Y6H8	435 aa		33.44	■■■□□ 2.94
NPLOC4-215	ENST00000574095	NIM1K	Q8IY84	436 aa		33.43	■■■□□ 2.94
NPLOC4-215	ENST00000574095	COL4A1	P02462	1669 aa		33.42	■■■□□ 2.94
NPLOC4-215	ENST00000574095	VAMP4	O75379	141 aa		33.42	■■■□□ 2.94
NPLOC4-215	ENST00000574095	TMC4	Q7Z404	712 aa		33.42	■■■□□ 2.94
NPLOC4-215	ENST00000574095	HACL1	Q9UJ83	578 aa		33.42	■■■□□ 2.94
NPLOC4-215	ENST00000574095	IGKV5-2	P06315	115 aa		33.41	■■■□□ 2.94
NPLOC4-215	ENST00000574095	CHADL	Q6NUI6	762 aa		33.41	■■■□□ 2.94
NPLOC4-215	ENST00000574095	VPS33B	Q9H267	617 aa		33.41	■■■□□ 2.94
NPLOC4-215	ENST00000574095	HSP90B1	P14625	803 aa	Known RBP	33.39	■■■□□ 2.94
NPLOC4-215	ENST00000574095	LRRC37A	A6NMS7	1700 aa		33.39	■■■□□ 2.94
NPLOC4-215	ENST00000574095	PDE8A	O60658	829 aa		33.38	■■■□□ 2.93
NPLOC4-215	ENST00000574095	EPHX2	P34913	555 aa		33.38	■■■□□ 2.93
NPLOC4-215	ENST00000574095	NEXN	Q0ZGT2	675 aa		33.38	■■■□□ 2.93
NPLOC4-215	ENST00000574095	EAPP	Q56P03	285 aa	Predicted RBP	33.38	■■■□□ 2.93
NPLOC4-215	ENST00000574095	SEC31B	Q9NQW1	1179 aa		33.38	■■■□□ 2.93
NPLOC4-215	ENST00000574095	FLII	Q13045	1269 aa		33.37	■■■□□ 2.93
NPLOC4-215	ENST00000574095	CWF19L2	Q2TBE0	894 aa	Known RBP	33.37	■■■□□ 2.93
NPLOC4-215	ENST00000574095	CACNA1F	O60840	1977 aa		33.37	■■■□□ 2.93
NPLOC4-215	ENST00000574095	RPS8	P62241	208 aa	Known RBP	33.36	■■■□□ 2.93
NPLOC4-215	ENST00000574095	LDHD	Q86WU2	507 aa		33.36	■■■□□ 2.93
NPLOC4-215	ENST00000574095	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.36	■■■□□ 2.93
NPLOC4-215	ENST00000574095	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.36	■■■□□ 2.93
NPLOC4-215	ENST00000574095	KIAA2012	Q0VF49	1180 aa		33.35	■■■□□ 2.93
NPLOC4-215	ENST00000574095	MYH16	Q9H6N6	1097 aa		33.35	■■■□□ 2.93
NPLOC4-215	ENST00000574095	ZNRF3	Q9ULT6	936 aa		33.35	■■■□□ 2.93
NPLOC4-215	ENST00000574095	NEURL1B	A8MQ27	555 aa		33.34	■■■□□ 2.93
NPLOC4-215	ENST00000574095	FKBP5	Q13451	457 aa	Predicted RBP	33.34	■■■□□ 2.93
NPLOC4-215	ENST00000574095	CCDC152	Q4G0S7	254 aa		33.34	■■■□□ 2.93
NPLOC4-215	ENST00000574095	CLEC11A	Q9Y240	323 aa		33.34	■■■□□ 2.93
NPLOC4-215	ENST00000574095	DUOX1	Q9NRD9	1551 aa		33.34	■■■□□ 2.93
NPLOC4-215	ENST00000574095	CDHR2	Q9BYE9	1310 aa		33.33	■■■□□ 2.93
NPLOC4-215	ENST00000574095	GPSM2	P81274	684 aa		33.33	■■■□□ 2.93
NPLOC4-215	ENST00000574095	CXCL9	Q07325	125 aa		33.32	■■■□□ 2.92
NPLOC4-215	ENST00000574095	LTBP1	Q14766	1721 aa		33.32	■■■□□ 2.92
NPLOC4-215	ENST00000574095	LMOD1	P29536	600 aa	Predicted RBP	33.31	■■■□□ 2.92
NPLOC4-215	ENST00000574095	SCNN1D	P51172	638 aa		33.31	■■■□□ 2.92
NPLOC4-215	ENST00000574095	PNMA8A	Q86V59	439 aa	Predicted RBP	33.31	■■■□□ 2.92
NPLOC4-215	ENST00000574095	KLRG1	Q96E93	195 aa		33.31	■■■□□ 2.92
NPLOC4-215	ENST00000574095	POLL	Q9UGP5	575 aa		33.3	■■■□□ 2.92
NPLOC4-215	ENST00000574095	C6orf229	H3BNL8	230 aa		33.29	■■■□□ 2.92
NPLOC4-215	ENST00000574095	EPS15	P42566	896 aa		33.29	■■■□□ 2.92
NPLOC4-215	ENST00000574095	DNAAF4	Q8WXU2	420 aa		33.29	■■■□□ 2.92
NPLOC4-215	ENST00000574095	ZNF521	Q96K83	1311 aa		33.28	■■■□□ 2.92
NPLOC4-215	ENST00000574095	RIMBP2	O15034	1052 aa		33.28	■■■□□ 2.92
NPLOC4-215	ENST00000574095	WASHC4	Q2M389	1173 aa		33.28	■■■□□ 2.92
NPLOC4-215	ENST00000574095	ADAMTSL1	Q8N6G6	1762 aa		33.28	■■■□□ 2.92
NPLOC4-215	ENST00000574095		H7C1W4	665 aa		33.27	■■■□□ 2.92
NPLOC4-215	ENST00000574095	CTSW	P56202	376 aa		33.27	■■■□□ 2.92
NPLOC4-215	ENST00000574095	MYH3	P11055	1940 aa		33.26	■■■□□ 2.92
NPLOC4-215	ENST00000574095	RAD17	O75943	681 aa		33.26	■■■□□ 2.91
NPLOC4-215	ENST00000574095	GCKR	Q14397	625 aa		33.26	■■■□□ 2.91
NPLOC4-215	ENST00000574095	CIAPIN1	Q6FI81	312 aa		33.26	■■■□□ 2.91
NPLOC4-215	ENST00000574095	UBE3B	Q7Z3V4	1068 aa		33.26	■■■□□ 2.91
NPLOC4-215	ENST00000574095	YDJC	A8MPS7	323 aa		33.25	■■■□□ 2.91
NPLOC4-215	ENST00000574095	TTLL11	Q8NHH1	800 aa		33.25	■■■□□ 2.91
NPLOC4-215	ENST00000574095	TBC1D16	Q8TBP0	767 aa		33.25	■■■□□ 2.91
NPLOC4-215	ENST00000574095	GPR101	Q96P66	508 aa	Predicted RBP	33.25	■■■□□ 2.91
NPLOC4-215	ENST00000574095	ITGBL1	O95965	494 aa	Predicted RBP	33.24	■■■□□ 2.91
NPLOC4-215	ENST00000574095	MAP1S	Q66K74	1059 aa	Predicted RBP	33.24	■■■□□ 2.91
NPLOC4-215	ENST00000574095	ANKRD18A	Q8IVF6	992 aa		33.24	■■■□□ 2.91
NPLOC4-215	ENST00000574095	LINS1	Q8NG48	757 aa		33.23	■■■□□ 2.91
NPLOC4-215	ENST00000574095	DBNDD1	Q9H9R9	158 aa		33.23	■■■□□ 2.91
NPLOC4-215	ENST00000574095	PASK	Q96RG2	1323 aa		33.23	■■■□□ 2.91
NPLOC4-215	ENST00000574095		F6X3S4	739 aa		33.22	■■■□□ 2.91
NPLOC4-215	ENST00000574095	GMPS	P49915	693 aa	Predicted RBP	33.22	■■■□□ 2.91
NPLOC4-215	ENST00000574095	EYA3	Q99504	573 aa		33.22	■■■□□ 2.91
NPLOC4-215	ENST00000574095	GREM2	Q9H772	168 aa		33.22	■■■□□ 2.91
NPLOC4-215	ENST00000574095	PODXL2	Q9NZ53	605 aa		33.22	■■■□□ 2.91
NPLOC4-215	ENST00000574095	GPRC5D	Q9NZD1	345 aa		33.22	■■■□□ 2.91
NPLOC4-215	ENST00000574095	ANKIB1	Q9P2G1	1089 aa		33.22	■■■□□ 2.91
NPLOC4-215	ENST00000574095	TNIP1	Q15025	636 aa		33.21	■■■□□ 2.91
NPLOC4-215	ENST00000574095	CNTROB	Q8N137	903 aa		33.21	■■■□□ 2.91
NPLOC4-215	ENST00000574095	DOK7	Q18PE1	504 aa		33.2	■■■□□ 2.91
NPLOC4-215	ENST00000574095	CDC5L	Q99459	802 aa	Known RBP	33.2	■■■□□ 2.91
NPLOC4-215	ENST00000574095	BCL2L13	Q9BXK5	485 aa		33.2	■■■□□ 2.91
NPLOC4-215	ENST00000574095	UFL1	O94874	794 aa		33.19	■■■□□ 2.9

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