RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
CCDC40-210ENST00000573903 FOXN1O15353 648 aa15.84■□□□□ 0.13
CCDC40-210ENST00000573903 CTCFP49711 727 aaPredicted RBP15.84■□□□□ 0.13
CCDC40-210ENST00000573903 ADARB2Q9NS39 739 aaKnown RBP15.84■□□□□ 0.13
CCDC40-210ENST00000573903 TRIM35Q9UPQ4 493 aa15.84■□□□□ 0.13
CCDC40-210ENST00000573903 DDX60Q8IY21 1712 aaKnown RBP15.83■□□□□ 0.13
CCDC40-210ENST00000573903 CIAPIN1Q6FI81 312 aa15.83■□□□□ 0.12
CCDC40-210ENST00000573903 ANKRD13DQ6ZTN6 518 aa15.83■□□□□ 0.12
CCDC40-210ENST00000573903 PAXIP1Q6ZW49 1069 aaPredicted RBP15.83■□□□□ 0.12
CCDC40-210ENST00000573903 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
CCDC40-210ENST00000573903 HYPKQ9NX55 129 aa15.83■□□□□ 0.12
CCDC40-210ENST00000573903 GPRC5DQ9NZD1 345 aa15.83■□□□□ 0.12
CCDC40-210ENST00000573903 CDHR2Q9BYE9 1310 aa15.83■□□□□ 0.12
CCDC40-210ENST00000573903 CXCL9Q07325 125 aa15.82■□□□□ 0.12
CCDC40-210ENST00000573903 KIAA2012Q0VF49 1180 aa15.82■□□□□ 0.12
CCDC40-210ENST00000573903 TNIP1Q15025 636 aa15.82■□□□□ 0.12
CCDC40-210ENST00000573903 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
CCDC40-210ENST00000573903 PRDM10Q9NQV6 1147 aa15.82■□□□□ 0.12
CCDC40-210ENST00000573903 ADAMTS8Q9UP79 889 aa15.82■□□□□ 0.12
CCDC40-210ENST00000573903 LRRC37AA6NMS7 1700 aa15.82■□□□□ 0.12
CCDC40-210ENST00000573903 TAF1P21675 1872 aa15.81■□□□□ 0.12
CCDC40-210ENST00000573903 ECE1P42892 770 aa15.81■□□□□ 0.12
CCDC40-210ENST00000573903 MAP2K1Q02750 393 aaPredicted RBP15.81■□□□□ 0.12
CCDC40-210ENST00000573903 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
CCDC40-210ENST00000573903 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
CCDC40-210ENST00000573903 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
CCDC40-210ENST00000573903 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-210ENST00000573903 GOLGA2Q08379 1002 aa15.8■□□□□ 0.12
CCDC40-210ENST00000573903 ZNF428Q96B54 188 aa15.8■□□□□ 0.12
CCDC40-210ENST00000573903 WBP1LQ9NX94 342 aa15.8■□□□□ 0.12
CCDC40-210ENST00000573903 ATP5J2-PTCD1G3V325 749 aa15.79■□□□□ 0.12
CCDC40-210ENST00000573903 RAD17O75943 681 aa15.79■□□□□ 0.12
CCDC40-210ENST00000573903 HSP90B1P14625 803 aaKnown RBP15.79■□□□□ 0.12
CCDC40-210ENST00000573903 RIC3Q7Z5B4 369 aa15.79■□□□□ 0.12
CCDC40-210ENST00000573903 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
CCDC40-210ENST00000573903 ISCA1Q9BUE6 129 aa15.79■□□□□ 0.12
CCDC40-210ENST00000573903 BEGAINQ9BUH8 593 aa15.79■□□□□ 0.12
CCDC40-210ENST00000573903 MBIPQ9NS73 344 aa15.79■□□□□ 0.12
CCDC40-210ENST00000573903 GNAI1P63096 354 aa15.78■□□□□ 0.12
CCDC40-210ENST00000573903 GRM1Q13255 1194 aa15.78■□□□□ 0.12
CCDC40-210ENST00000573903 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
CCDC40-210ENST00000573903 CAPNS2Q96L46 248 aa15.78■□□□□ 0.12
CCDC40-210ENST00000573903 PRKRIP1Q9H875 184 aaPredicted RBP15.78■□□□□ 0.12
CCDC40-210ENST00000573903 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
CCDC40-210ENST00000573903 THSD7BQ9C0I4 1608 aa15.78■□□□□ 0.12
CCDC40-210ENST00000573903 DUOX1Q9NRD9 1551 aa15.78■□□□□ 0.12
CCDC40-210ENST00000573903 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-210ENST00000573903 H7C1D1 291 aa15.77■□□□□ 0.12
CCDC40-210ENST00000573903 TRAF5O00463 557 aa15.77■□□□□ 0.12
CCDC40-210ENST00000573903 LBX1P52954 281 aa15.77■□□□□ 0.12
CCDC40-210ENST00000573903 WASHC4Q2M389 1173 aa15.77■□□□□ 0.12
CCDC40-210ENST00000573903 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-210ENST00000573903 EYA3Q99504 573 aa15.77■□□□□ 0.12
CCDC40-210ENST00000573903 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
CCDC40-210ENST00000573903 IFT57Q9NWB7 429 aa15.77■□□□□ 0.12
CCDC40-210ENST00000573903 C6orf229H3BNL8 230 aa15.76■□□□□ 0.11
CCDC40-210ENST00000573903 IRS4O14654 1257 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-210ENST00000573903 FMR1Q06787 632 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCDC40-210ENST00000573903 ZC3H15Q8WU90 426 aaKnown RBP15.76■□□□□ 0.11
CCDC40-210ENST00000573903 CELF1Q92879 486 aaKnown RBP15.76■□□□□ 0.11
CCDC40-210ENST00000573903 TLL2Q9Y6L7 1015 aa15.76■□□□□ 0.11
CCDC40-210ENST00000573903 APAF1O14727 1248 aa15.75■□□□□ 0.11
CCDC40-210ENST00000573903 CELF2O95319 508 aaKnown RBP15.75■□□□□ 0.11
CCDC40-210ENST00000573903 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
CCDC40-210ENST00000573903 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
CCDC40-210ENST00000573903 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
CCDC40-210ENST00000573903 YDJCA8MPS7 323 aa15.74■□□□□ 0.11
CCDC40-210ENST00000573903 RIMBP2O15034 1052 aa15.74■□□□□ 0.11
CCDC40-210ENST00000573903 DDX58O95786 925 aaKnown RBP15.74■□□□□ 0.11
CCDC40-210ENST00000573903 HSPA8P11142 646 aaKnown RBP15.74■□□□□ 0.11
CCDC40-210ENST00000573903 CST9Q5W186 159 aa15.74■□□□□ 0.11
CCDC40-210ENST00000573903 CDC37L1Q7L3B6 337 aa15.74■□□□□ 0.11
CCDC40-210ENST00000573903 MICALL2Q8IY33 904 aa15.74■□□□□ 0.11
CCDC40-210ENST00000573903 ZBTB38Q8NAP3 1195 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-210ENST00000573903 GPR101Q96P66 508 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-210ENST00000573903 GLIS2Q9BZE0 524 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-210ENST00000573903 ZNF408Q9H9D4 720 aa15.74■□□□□ 0.11
CCDC40-210ENST00000573903 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
CCDC40-210ENST00000573903 G3V3G9 751 aa15.73■□□□□ 0.11
CCDC40-210ENST00000573903 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
CCDC40-210ENST00000573903 ZNF853P0CG23 659 aa15.73■□□□□ 0.11
CCDC40-210ENST00000573903 RPS8P62241 208 aaKnown RBP15.73■□□□□ 0.11
CCDC40-210ENST00000573903 GPSM2P81274 684 aa15.73■□□□□ 0.11
CCDC40-210ENST00000573903 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
CCDC40-210ENST00000573903 TRPM4Q8TD43 1214 aa15.73■□□□□ 0.11
CCDC40-210ENST00000573903 MYD88Q99836 296 aa15.73■□□□□ 0.11
CCDC40-210ENST00000573903 PSMD14O00487 310 aa15.72■□□□□ 0.11
CCDC40-210ENST00000573903 ECE2O60344 883 aa15.72■□□□□ 0.11
CCDC40-210ENST00000573903 RPS12P25398 132 aaKnown RBP15.72■□□□□ 0.11
CCDC40-210ENST00000573903 CCDC152Q4G0S7 254 aa15.72■□□□□ 0.11
CCDC40-210ENST00000573903 CCDC30Q5VVM6 783 aa15.72■□□□□ 0.11
CCDC40-210ENST00000573903 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
CCDC40-210ENST00000573903 DPF2Q92785 391 aa15.72■□□□□ 0.11
CCDC40-210ENST00000573903 PHAXQ9H814 394 aaKnown RBP15.72■□□□□ 0.11
CCDC40-210ENST00000573903 PGAP2Q9UHJ9 254 aa15.72■□□□□ 0.11
CCDC40-210ENST00000573903 MAP2K2P36507 400 aa15.71■□□□□ 0.11
CCDC40-210ENST00000573903 SAPCD2Q86UD0 394 aa15.71■□□□□ 0.11
CCDC40-210ENST00000573903 HHIPL1Q96JK4 782 aa15.71■□□□□ 0.11
CCDC40-210ENST00000573903 ZC3H12CQ9C0D7 883 aaKnown RBP15.71■□□□□ 0.11
CCDC40-210ENST00000573903 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms