RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 ATP5J2-PTCD1G3V325 749 aa18.55■□□□□ 0.56
TVP23A-208ENST00000573857 GNAI1P63096 354 aa18.55■□□□□ 0.56
TVP23A-208ENST00000573857 MAP1SQ66K74 1059 aaPredicted RBP18.55■□□□□ 0.56
TVP23A-208ENST00000573857 CNTROBQ8N137 903 aa18.55■□□□□ 0.56
TVP23A-208ENST00000573857 MPNDQ8N594 471 aa18.55■□□□□ 0.56
TVP23A-208ENST00000573857 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
TVP23A-208ENST00000573857 EPS15P42566 896 aa18.54■□□□□ 0.56
TVP23A-208ENST00000573857 ZNRF3Q9ULT6 936 aa18.54■□□□□ 0.56
TVP23A-208ENST00000573857 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
TVP23A-208ENST00000573857 TRIM28Q13263 835 aaKnown RBP18.53■□□□□ 0.56
TVP23A-208ENST00000573857 TMC4Q7Z404 712 aa18.53■□□□□ 0.56
TVP23A-208ENST00000573857 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
TVP23A-208ENST00000573857 CXCL9Q07325 125 aa18.52■□□□□ 0.56
TVP23A-208ENST00000573857 GOLGA2Q08379 1002 aa18.52■□□□□ 0.56
TVP23A-208ENST00000573857 SF3B3Q15393 1217 aaKnown RBP18.52■□□□□ 0.56
TVP23A-208ENST00000573857 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.55
TVP23A-208ENST00000573857 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
TVP23A-208ENST00000573857 USP50Q70EL3 339 aaPredicted RBP18.51■□□□□ 0.55
TVP23A-208ENST00000573857 RIC3Q7Z5B4 369 aa18.51■□□□□ 0.55
TVP23A-208ENST00000573857 C8orf58Q8NAV2 365 aa18.51■□□□□ 0.55
TVP23A-208ENST00000573857 PHAXQ9H814 394 aaKnown RBP18.51■□□□□ 0.55
TVP23A-208ENST00000573857 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
TVP23A-208ENST00000573857 CELF1Q92879 486 aaKnown RBP18.5■□□□□ 0.55
TVP23A-208ENST00000573857 GPRC5DQ9NZD1 345 aa18.5■□□□□ 0.55
TVP23A-208ENST00000573857 LRRC37AA6NMS7 1700 aa18.49■□□□□ 0.55
TVP23A-208ENST00000573857 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
TVP23A-208ENST00000573857 VEGFBP49765 207 aa18.49■□□□□ 0.55
TVP23A-208ENST00000573857 ADARB2Q9NS39 739 aaKnown RBP18.49■□□□□ 0.55
TVP23A-208ENST00000573857 TAF1P21675 1872 aa18.48■□□□□ 0.55
TVP23A-208ENST00000573857 GMPSP49915 693 aaPredicted RBP18.48■□□□□ 0.55
TVP23A-208ENST00000573857 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
TVP23A-208ENST00000573857 CIAPIN1Q6FI81 312 aa18.48■□□□□ 0.55
TVP23A-208ENST00000573857 ZBTB38Q8NAP3 1195 aaPredicted RBP18.48■□□□□ 0.55
TVP23A-208ENST00000573857 CDHR2Q9BYE9 1310 aa18.48■□□□□ 0.55
TVP23A-208ENST00000573857 RASSF10A6NK89 507 aa18.47■□□□□ 0.55
TVP23A-208ENST00000573857 RAD17O75943 681 aa18.47■□□□□ 0.55
TVP23A-208ENST00000573857 TNIP1Q15025 636 aa18.47■□□□□ 0.55
TVP23A-208ENST00000573857 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
TVP23A-208ENST00000573857 TNS4Q8IZW8 715 aa18.47■□□□□ 0.55
TVP23A-208ENST00000573857 MYD88Q99836 296 aa18.47■□□□□ 0.55
TVP23A-208ENST00000573857 COL4A1P02462 1669 aa18.47■□□□□ 0.55
TVP23A-208ENST00000573857 YDJCA8MPS7 323 aa18.46■□□□□ 0.55
TVP23A-208ENST00000573857 CCDC191Q8NCU4 936 aa18.46■□□□□ 0.55
TVP23A-208ENST00000573857 CHMP4AQ9BY43 222 aa18.46■□□□□ 0.55
TVP23A-208ENST00000573857 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
TVP23A-208ENST00000573857 NSFL1CQ9UNZ2 370 aaKnown RBP18.46■□□□□ 0.55
TVP23A-208ENST00000573857 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
TVP23A-208ENST00000573857 GPSM2P81274 684 aa18.45■□□□□ 0.54
TVP23A-208ENST00000573857 FMR1Q06787 632 aaKnown RBP eCLIP18.45■□□□□ 0.54
TVP23A-208ENST00000573857 WASHC4Q2M389 1173 aa18.45■□□□□ 0.54
TVP23A-208ENST00000573857 DEFB115Q30KQ5 88 aa18.45■□□□□ 0.54
TVP23A-208ENST00000573857 TSPYL6Q8N831 410 aa18.45■□□□□ 0.54
TVP23A-208ENST00000573857 TRAF5O00463 557 aa18.44■□□□□ 0.54
TVP23A-208ENST00000573857 DDX58O95786 925 aaKnown RBP18.44■□□□□ 0.54
TVP23A-208ENST00000573857 PCCAP05165 728 aaPredicted RBP18.44■□□□□ 0.54
TVP23A-208ENST00000573857 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
TVP23A-208ENST00000573857 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
TVP23A-208ENST00000573857 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
TVP23A-208ENST00000573857 METTL22Q9BUU2 404 aaPredicted RBP18.44■□□□□ 0.54
TVP23A-208ENST00000573857 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
TVP23A-208ENST00000573857 CWC25Q9NXE8 425 aaPredicted RBP18.44■□□□□ 0.54
TVP23A-208ENST00000573857 POLLQ9UGP5 575 aa18.44■□□□□ 0.54
TVP23A-208ENST00000573857 FOXN1O15353 648 aa18.43■□□□□ 0.54
TVP23A-208ENST00000573857 C6orf229H3BNL8 230 aa18.42■□□□□ 0.54
TVP23A-208ENST00000573857 CST9Q5W186 159 aa18.42■□□□□ 0.54
TVP23A-208ENST00000573857 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
TVP23A-208ENST00000573857 DBNDD1Q9H9R9 158 aa18.42■□□□□ 0.54
TVP23A-208ENST00000573857 SEC31BQ9NQW1 1179 aa18.42■□□□□ 0.54
TVP23A-208ENST00000573857 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
TVP23A-208ENST00000573857 RIMBP2O15034 1052 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 PDE8AO60658 829 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 HIRAP54198 1017 aaPredicted RBP18.41■□□□□ 0.54
TVP23A-208ENST00000573857 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 TBC1D16Q8TBP0 767 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 TRPM4Q8TD43 1214 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 ZC3H15Q8WU90 426 aaKnown RBP18.41■□□□□ 0.54
TVP23A-208ENST00000573857 AIDAQ96BJ3 306 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 EYA3Q99504 573 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 WBP1LQ9NX94 342 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 PGAP2Q9UHJ9 254 aa18.41■□□□□ 0.54
TVP23A-208ENST00000573857 CNOT7Q9UIV1 285 aaKnown RBP18.41■□□□□ 0.54
TVP23A-208ENST00000573857 WDR33Q9C0J8 1336 aaKnown RBP18.41■□□□□ 0.54
TVP23A-208ENST00000573857 SHTN1A0MZ66 631 aa18.4■□□□□ 0.54
TVP23A-208ENST00000573857 PSMD14O00487 310 aa18.4■□□□□ 0.54
TVP23A-208ENST00000573857 KSR2Q6VAB6 950 aa18.4■□□□□ 0.54
TVP23A-208ENST00000573857 MICALL2Q8IY33 904 aa18.4■□□□□ 0.54
TVP23A-208ENST00000573857 JARID2Q92833 1246 aaPredicted RBP18.4■□□□□ 0.54
TVP23A-208ENST00000573857 PODXL2Q9NZ53 605 aa18.4■□□□□ 0.54
TVP23A-208ENST00000573857 ZBTB12Q9Y330 459 aaPredicted RBP18.4■□□□□ 0.54
TVP23A-208ENST00000573857 PI4KAP2A4QPH2 592 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 H7C1D1 291 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 ECE2O60344 883 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 PI4KAP1Q8N8J0 262 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 DPF2Q92785 391 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 GPR101Q96P66 508 aaPredicted RBP18.39■□□□□ 0.53
TVP23A-208ENST00000573857 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 GLIS2Q9BZE0 524 aaPredicted RBP18.39■□□□□ 0.53
TVP23A-208ENST00000573857 TLL2Q9Y6L7 1015 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 IL16Q14005 1332 aa18.39■□□□□ 0.53
TVP23A-208ENST00000573857 IGKV5-2P06315 115 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms