RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 SF3B3Q15393 1217 aaKnown RBP27.36■■□□□ 1.97
HCFC1R1-205ENST00000573842 KSR2Q6VAB6 950 aa27.36■■□□□ 1.97
HCFC1R1-205ENST00000573842 SP8Q8IXZ3 490 aa27.36■■□□□ 1.97
HCFC1R1-205ENST00000573842 LARGE2Q8N3Y3 721 aa27.36■■□□□ 1.97
HCFC1R1-205ENST00000573842 MYH16Q9H6N6 1097 aa27.36■■□□□ 1.97
HCFC1R1-205ENST00000573842 FZD9O00144 591 aa27.35■■□□□ 1.97
HCFC1R1-205ENST00000573842 NEXNQ0ZGT2 675 aa27.35■■□□□ 1.97
HCFC1R1-205ENST00000573842 SUPT20HQ8NEM7 779 aa27.35■■□□□ 1.97
HCFC1R1-205ENST00000573842 L3MBTL3Q96JM7 780 aaPredicted RBP27.35■■□□□ 1.97
HCFC1R1-205ENST00000573842 PI4KAP2A4QPH2 592 aa27.34■■□□□ 1.97
HCFC1R1-205ENST00000573842 SLC4A2P04920 1241 aa27.34■■□□□ 1.97
HCFC1R1-205ENST00000573842 DPP8Q6V1X1 898 aaPredicted RBP27.34■■□□□ 1.97
HCFC1R1-205ENST00000573842 PI4KAP1Q8N8J0 262 aa27.34■■□□□ 1.97
HCFC1R1-205ENST00000573842 DUOX1Q9NRD9 1551 aa27.34■■□□□ 1.97
HCFC1R1-205ENST00000573842 PPIP5K2O43314 1243 aa27.33■■□□□ 1.97
HCFC1R1-205ENST00000573842 PCCAP05165 728 aaPredicted RBP27.33■■□□□ 1.97
HCFC1R1-205ENST00000573842 EIF6P56537 245 aaKnown RBP27.33■■□□□ 1.97
HCFC1R1-205ENST00000573842 EXOSC9Q06265 439 aaKnown RBP27.32■■□□□ 1.96
HCFC1R1-205ENST00000573842 NIM1KQ8IY84 436 aa27.32■■□□□ 1.96
HCFC1R1-205ENST00000573842 VPS33BQ9H267 617 aa27.32■■□□□ 1.96
HCFC1R1-205ENST00000573842 COL4A1P02462 1669 aa27.32■■□□□ 1.96
HCFC1R1-205ENST00000573842 LTBP1Q14766 1721 aa27.32■■□□□ 1.96
HCFC1R1-205ENST00000573842 SPEF2Q9C093 1822 aa27.32■■□□□ 1.96
HCFC1R1-205ENST00000573842 GPC2Q8N158 579 aa27.31■■□□□ 1.96
HCFC1R1-205ENST00000573842 MPNDQ8N594 471 aa27.31■■□□□ 1.96
HCFC1R1-205ENST00000573842 RTFDC1Q9BY42 306 aaPredicted RBP27.31■■□□□ 1.96
HCFC1R1-205ENST00000573842 FLIIQ13045 1269 aa27.3■■□□□ 1.96
HCFC1R1-205ENST00000573842 AOC3Q16853 763 aa27.3■■□□□ 1.96
HCFC1R1-205ENST00000573842 G2E3Q7L622 706 aa27.3■■□□□ 1.96
HCFC1R1-205ENST00000573842 VAMP4O75379 141 aa27.29■■□□□ 1.96
HCFC1R1-205ENST00000573842 FKBP5Q13451 457 aaPredicted RBP27.29■■□□□ 1.96
HCFC1R1-205ENST00000573842 CELF1Q92879 486 aaKnown RBP27.29■■□□□ 1.96
HCFC1R1-205ENST00000573842 SPINK5Q9NQ38 1064 aaPredicted RBP27.29■■□□□ 1.96
HCFC1R1-205ENST00000573842 CDHR2Q9BYE9 1310 aa27.29■■□□□ 1.96
HCFC1R1-205ENST00000573842 ADAMTSL1Q8N6G6 1762 aa27.28■■□□□ 1.96
HCFC1R1-205ENST00000573842 PDE8AO60658 829 aa27.28■■□□□ 1.96
HCFC1R1-205ENST00000573842 CCDC152Q4G0S7 254 aa27.28■■□□□ 1.96
HCFC1R1-205ENST00000573842 HACL1Q9UJ83 578 aa27.28■■□□□ 1.96
HCFC1R1-205ENST00000573842 IGKV5-2P06315 115 aa27.27■■□□□ 1.96
HCFC1R1-205ENST00000573842 TAF1DQ9H5J8 278 aaPredicted RBP27.27■■□□□ 1.96
HCFC1R1-205ENST00000573842 GJA3Q9Y6H8 435 aa27.26■■□□□ 1.95
HCFC1R1-205ENST00000573842 ZNF521Q96K83 1311 aa27.25■■□□□ 1.95
HCFC1R1-205ENST00000573842 NEURL1BA8MQ27 555 aa27.25■■□□□ 1.95
HCFC1R1-205ENST00000573842 CHADLQ6NUI6 762 aa27.25■■□□□ 1.95
HCFC1R1-205ENST00000573842 KIAA2012Q0VF49 1180 aa27.24■■□□□ 1.95
HCFC1R1-205ENST00000573842 CWF19L2Q2TBE0 894 aaKnown RBP27.24■■□□□ 1.95
HCFC1R1-205ENST00000573842 LDHDQ86WU2 507 aa27.24■■□□□ 1.95
HCFC1R1-205ENST00000573842 JARID2Q92833 1246 aaPredicted RBP27.24■■□□□ 1.95
HCFC1R1-205ENST00000573842 LMOD1P29536 600 aaPredicted RBP27.23■■□□□ 1.95
HCFC1R1-205ENST00000573842 EPHX2P34913 555 aa27.23■■□□□ 1.95
HCFC1R1-205ENST00000573842 RPS8P62241 208 aaKnown RBP27.23■■□□□ 1.95
HCFC1R1-205ENST00000573842 DNAAF4Q8WXU2 420 aa27.23■■□□□ 1.95
HCFC1R1-205ENST00000573842 POTEIP0CG38 1075 aa27.22■■□□□ 1.95
HCFC1R1-205ENST00000573842 POTEJP0CG39 1038 aa27.22■■□□□ 1.95
HCFC1R1-205ENST00000573842 CTSWP56202 376 aa27.22■■□□□ 1.95
HCFC1R1-205ENST00000573842 EAPPQ56P03 285 aaPredicted RBP27.22■■□□□ 1.95
HCFC1R1-205ENST00000573842 ZNRF3Q9ULT6 936 aa27.22■■□□□ 1.95
HCFC1R1-205ENST00000573842 NSFL1CQ9UNZ2 370 aaKnown RBP27.22■■□□□ 1.95
HCFC1R1-205ENST00000573842 PNMA8AQ86V59 439 aaPredicted RBP27.21■■□□□ 1.95
HCFC1R1-205ENST00000573842 SEC31BQ9NQW1 1179 aa27.21■■□□□ 1.95
HCFC1R1-205ENST00000573842 CCDC85AQ96PX6 553 aaPredicted RBP27.2■■□□□ 1.94
HCFC1R1-205ENST00000573842 CCER2I3L3R5 266 aa27.19■■□□□ 1.94
HCFC1R1-205ENST00000573842 GPSM2P81274 684 aa27.19■■□□□ 1.94
HCFC1R1-205ENST00000573842 UBE3BQ7Z3V4 1068 aa27.19■■□□□ 1.94
HCFC1R1-205ENST00000573842 LINS1Q8NG48 757 aa27.19■■□□□ 1.94
HCFC1R1-205ENST00000573842 HTRA3P83110 453 aa27.18■■□□□ 1.94
HCFC1R1-205ENST00000573842 GCKRQ14397 625 aa27.18■■□□□ 1.94
HCFC1R1-205ENST00000573842 ANKRD18AQ8IVF6 992 aa27.18■■□□□ 1.94
HCFC1R1-205ENST00000573842 CDC5LQ99459 802 aaKnown RBP27.18■■□□□ 1.94
HCFC1R1-205ENST00000573842 EYA3Q99504 573 aa27.18■■□□□ 1.94
HCFC1R1-205ENST00000573842 C6orf229H3BNL8 230 aa27.17■■□□□ 1.94
HCFC1R1-205ENST00000573842 SCNN1DP51172 638 aa27.17■■□□□ 1.94
HCFC1R1-205ENST00000573842 WASHC4Q2M389 1173 aa27.17■■□□□ 1.94
HCFC1R1-205ENST00000573842 RTL9Q8NET4 1388 aa27.17■■□□□ 1.94
HCFC1R1-205ENST00000573842 E9PSI1 815 aa27.16■■□□□ 1.94
HCFC1R1-205ENST00000573842 CLEC11AQ9Y240 323 aa27.16■■□□□ 1.94
HCFC1R1-205ENST00000573842 H7C1W4 665 aa27.15■■□□□ 1.94
HCFC1R1-205ENST00000573842 CXCL9Q07325 125 aa27.15■■□□□ 1.94
HCFC1R1-205ENST00000573842 CIAPIN1Q6FI81 312 aa27.15■■□□□ 1.94
HCFC1R1-205ENST00000573842 DNAJC5GQ8N7S2 189 aa27.15■■□□□ 1.94
HCFC1R1-205ENST00000573842 ANKIB1Q9P2G1 1089 aa27.15■■□□□ 1.94
HCFC1R1-205ENST00000573842 PSME4Q14997 1843 aa27.15■■□□□ 1.94
HCFC1R1-205ENST00000573842 TNIP1Q15025 636 aa27.14■■□□□ 1.94
HCFC1R1-205ENST00000573842 TTLL11Q8NHH1 800 aa27.14■■□□□ 1.94
HCFC1R1-205ENST00000573842 TBC1D16Q8TBP0 767 aa27.14■■□□□ 1.94
HCFC1R1-205ENST00000573842 PODXL2Q9NZ53 605 aa27.14■■□□□ 1.94
HCFC1R1-205ENST00000573842 POLLQ9UGP5 575 aa27.14■■□□□ 1.94
HCFC1R1-205ENST00000573842 F6X3S4 739 aa27.13■■□□□ 1.93
HCFC1R1-205ENST00000573842 UFL1O94874 794 aa27.13■■□□□ 1.93
HCFC1R1-205ENST00000573842 KLRG1Q96E93 195 aa27.13■■□□□ 1.93
HCFC1R1-205ENST00000573842 GREM2Q9H772 168 aa27.13■■□□□ 1.93
HCFC1R1-205ENST00000573842 RIMBP2O15034 1052 aa27.12■■□□□ 1.93
HCFC1R1-205ENST00000573842 RAD17O75943 681 aa27.12■■□□□ 1.93
HCFC1R1-205ENST00000573842 PLA2G12BQ9BX93 195 aa27.12■■□□□ 1.93
HCFC1R1-205ENST00000573842 GPRC5DQ9NZD1 345 aa27.12■■□□□ 1.93
HCFC1R1-205ENST00000573842 GGA1Q9UJY5 639 aa27.12■■□□□ 1.93
HCFC1R1-205ENST00000573842 XDHP47989 1333 aa27.12■■□□□ 1.93
HCFC1R1-205ENST00000573842 SCN9AQ15858 1988 aa27.11■■□□□ 1.93
HCFC1R1-205ENST00000573842 EPS15P42566 896 aa27.11■■□□□ 1.93
HCFC1R1-205ENST00000573842 BCL2L13Q9BXK5 485 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms