RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
RPAIN-213ENST00000573577 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
RPAIN-213ENST00000573577 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
RPAIN-213ENST00000573577 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
RPAIN-213ENST00000573577 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-213ENST00000573577 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
RPAIN-213ENST00000573577 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
RPAIN-213ENST00000573577 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
RPAIN-213ENST00000573577 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
RPAIN-213ENST00000573577 SF3B3Q15393 1217 aaKnown RBP17.18■□□□□ 0.34
RPAIN-213ENST00000573577 CWF19L2Q2TBE0 894 aaKnown RBP17.18■□□□□ 0.34
RPAIN-213ENST00000573577 DDX46Q7L014 1031 aaKnown RBP17.18■□□□□ 0.34
RPAIN-213ENST00000573577 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
RPAIN-213ENST00000573577 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
RPAIN-213ENST00000573577 BBOX1O75936 387 aa17.17■□□□□ 0.34
RPAIN-213ENST00000573577 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
RPAIN-213ENST00000573577 GRAPQ13588 217 aa17.16■□□□□ 0.34
RPAIN-213ENST00000573577 SLC51AQ86UW1 340 aa17.16■□□□□ 0.34
RPAIN-213ENST00000573577 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
RPAIN-213ENST00000573577 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-213ENST00000573577 PSMD1Q99460 953 aa17.16■□□□□ 0.34
RPAIN-213ENST00000573577 TMX4Q9H1E5 349 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-213ENST00000573577 ATP6V0A2Q9Y487 856 aa17.16■□□□□ 0.34
RPAIN-213ENST00000573577 KDM2BQ8NHM5 1336 aa17.16■□□□□ 0.34
RPAIN-213ENST00000573577 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
RPAIN-213ENST00000573577 F6X3S4 739 aa17.15■□□□□ 0.34
RPAIN-213ENST00000573577 IPO8O15397 1037 aaKnown RBP17.15■□□□□ 0.34
RPAIN-213ENST00000573577 PDE8AO60658 829 aa17.15■□□□□ 0.34
RPAIN-213ENST00000573577 JARID2Q92833 1246 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-213ENST00000573577 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-213ENST00000573577 GCKRQ14397 625 aa17.14■□□□□ 0.33
RPAIN-213ENST00000573577 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
RPAIN-213ENST00000573577 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
RPAIN-213ENST00000573577 CCDC88AQ3V6T2 1871 aa17.14■□□□□ 0.33
RPAIN-213ENST00000573577 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
RPAIN-213ENST00000573577 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
RPAIN-213ENST00000573577 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
RPAIN-213ENST00000573577 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
RPAIN-213ENST00000573577 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
RPAIN-213ENST00000573577 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
RPAIN-213ENST00000573577 DICER1Q9UPY3 1922 aaKnown RBP17.13■□□□□ 0.33
RPAIN-213ENST00000573577 GLTPD2A6NH11 291 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 H7C1W4 665 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 KIF3CO14782 793 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
RPAIN-213ENST00000573577 CCDC152Q4G0S7 254 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 BEND3Q5T5X7 828 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
RPAIN-213ENST00000573577 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
RPAIN-213ENST00000573577 BCAR3O75815 825 aa17.11■□□□□ 0.33
RPAIN-213ENST00000573577 CTSWP56202 376 aa17.11■□□□□ 0.33
RPAIN-213ENST00000573577 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
RPAIN-213ENST00000573577 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
RPAIN-213ENST00000573577 COL4A1P02462 1669 aa17.1■□□□□ 0.33
RPAIN-213ENST00000573577 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
RPAIN-213ENST00000573577 DPP8Q6V1X1 898 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-213ENST00000573577 RTFDC1Q9BY42 306 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-213ENST00000573577 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
RPAIN-213ENST00000573577 TAF1P21675 1872 aa17.1■□□□□ 0.33
RPAIN-213ENST00000573577 CASP7P55210 303 aa17.09■□□□□ 0.33
RPAIN-213ENST00000573577 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
RPAIN-213ENST00000573577 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-213ENST00000573577 MPNDQ8N594 471 aa17.09■□□□□ 0.33
RPAIN-213ENST00000573577 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
RPAIN-213ENST00000573577 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-213ENST00000573577 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-213ENST00000573577 CCT4P50991 539 aaKnown RBP17.08■□□□□ 0.32
RPAIN-213ENST00000573577 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
RPAIN-213ENST00000573577 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.32
RPAIN-213ENST00000573577 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
RPAIN-213ENST00000573577 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
RPAIN-213ENST00000573577 RRAGCQ9HB90 399 aa17.08■□□□□ 0.32
RPAIN-213ENST00000573577 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-213ENST00000573577 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
RPAIN-213ENST00000573577 COL4A5P29400 1685 aa17.07■□□□□ 0.32
RPAIN-213ENST00000573577 RTL9Q8NET4 1388 aa17.07■□□□□ 0.32
RPAIN-213ENST00000573577 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
RPAIN-213ENST00000573577 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
RPAIN-213ENST00000573577 VPS33BQ9H267 617 aa17.07■□□□□ 0.32
RPAIN-213ENST00000573577 DUOX1Q9NRD9 1551 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 FZD9O00144 591 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 GRM8O00222 908 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 PPIP5K2O43314 1243 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-213ENST00000573577 TRIM27P14373 513 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 AOC3Q16853 763 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
RPAIN-213ENST00000573577 GREM2Q9H772 168 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 WDR90Q96KV7 1748 aa17.06■□□□□ 0.32
RPAIN-213ENST00000573577 TOMM70O94826 608 aa17.05■□□□□ 0.32
RPAIN-213ENST00000573577 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-213ENST00000573577 GPSM2P81274 684 aa17.05■□□□□ 0.32
RPAIN-213ENST00000573577 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
RPAIN-213ENST00000573577 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
RPAIN-213ENST00000573577 C16orf71Q8IYS4 520 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-213ENST00000573577 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
RPAIN-213ENST00000573577 MYH3P11055 1940 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms