RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 POTEJP0CG39 1038 aa20.96■□□□□ 0.95
RAB40B-208ENST00000573395 LMOD1P29536 600 aaPredicted RBP20.96■□□□□ 0.95
RAB40B-208ENST00000573395 EPHX2P34913 555 aa20.96■□□□□ 0.95
RAB40B-208ENST00000573395 AOC3Q16853 763 aa20.96■□□□□ 0.95
RAB40B-208ENST00000573395 TSPYL6Q8N831 410 aa20.96■□□□□ 0.95
RAB40B-208ENST00000573395 VPS33BQ9H267 617 aa20.96■□□□□ 0.95
RAB40B-208ENST00000573395 SALL2Q9Y467 1007 aaPredicted RBP20.96■□□□□ 0.95
RAB40B-208ENST00000573395 CEP350Q5VT06 3117 aa20.96■□□□□ 0.95
RAB40B-208ENST00000573395 PNMA8AQ86V59 439 aaPredicted RBP20.95■□□□□ 0.94
RAB40B-208ENST00000573395 SF3B3Q15393 1217 aaKnown RBP20.94■□□□□ 0.94
RAB40B-208ENST00000573395 TWISTNBQ3B726 338 aaPredicted RBP20.94■□□□□ 0.94
RAB40B-208ENST00000573395 ZBTB38Q8NAP3 1195 aaPredicted RBP20.94■□□□□ 0.94
RAB40B-208ENST00000573395 IL16Q14005 1332 aa20.94■□□□□ 0.94
RAB40B-208ENST00000573395 SCN4AP35499 1836 aa20.93■□□□□ 0.94
RAB40B-208ENST00000573395 NCBP3Q53F19 620 aaKnown RBP20.93■□□□□ 0.94
RAB40B-208ENST00000573395 CCDC191Q8NCU4 936 aa20.93■□□□□ 0.94
RAB40B-208ENST00000573395 CWC25Q9NXE8 425 aaPredicted RBP20.93■□□□□ 0.94
RAB40B-208ENST00000573395 LAMB2P55268 1798 aa20.92■□□□□ 0.94
RAB40B-208ENST00000573395 METTL22Q9BUU2 404 aaPredicted RBP20.92■□□□□ 0.94
RAB40B-208ENST00000573395 RTFDC1Q9BY42 306 aaPredicted RBP20.92■□□□□ 0.94
RAB40B-208ENST00000573395 MAP3K2Q9Y2U5 619 aa20.92■□□□□ 0.94
RAB40B-208ENST00000573395 NEXNQ0ZGT2 675 aa20.91■□□□□ 0.94
RAB40B-208ENST00000573395 FAM9BQ8IZU0 186 aa20.91■□□□□ 0.94
RAB40B-208ENST00000573395 ZNRF3Q9ULT6 936 aa20.91■□□□□ 0.94
RAB40B-208ENST00000573395 COL4A5P29400 1685 aa20.9■□□□□ 0.94
RAB40B-208ENST00000573395 PCCAP05165 728 aaPredicted RBP20.9■□□□□ 0.94
RAB40B-208ENST00000573395 KSR2Q6VAB6 950 aa20.9■□□□□ 0.94
RAB40B-208ENST00000573395 CELF1Q92879 486 aaKnown RBP20.9■□□□□ 0.94
RAB40B-208ENST00000573395 NSFL1CQ9UNZ2 370 aaKnown RBP20.9■□□□□ 0.94
RAB40B-208ENST00000573395 PI4KAP2A4QPH2 592 aa20.89■□□□□ 0.93
RAB40B-208ENST00000573395 KIAA2012Q0VF49 1180 aa20.89■□□□□ 0.93
RAB40B-208ENST00000573395 WDR63Q8IWG1 891 aa20.89■□□□□ 0.93
RAB40B-208ENST00000573395 PI4KAP1Q8N8J0 262 aa20.89■□□□□ 0.93
RAB40B-208ENST00000573395 DDX60Q8IY21 1712 aaKnown RBP20.89■□□□□ 0.93
RAB40B-208ENST00000573395 PDE8AO60658 829 aa20.88■□□□□ 0.93
RAB40B-208ENST00000573395 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
RAB40B-208ENST00000573395 RPS8P62241 208 aaKnown RBP20.88■□□□□ 0.93
RAB40B-208ENST00000573395 CCDC152Q4G0S7 254 aa20.88■□□□□ 0.93
RAB40B-208ENST00000573395 JARID2Q92833 1246 aaPredicted RBP20.88■□□□□ 0.93
RAB40B-208ENST00000573395 CREBZFQ9NS37 354 aa20.88■□□□□ 0.93
RAB40B-208ENST00000573395 FANCIQ9NVI1 1328 aa20.87■□□□□ 0.93
RAB40B-208ENST00000573395 C6orf229H3BNL8 230 aa20.87■□□□□ 0.93
RAB40B-208ENST00000573395 EPS15P42566 896 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 SCNN1DP51172 638 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 CXCL9Q07325 125 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 TNIP1Q15025 636 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 WASHC4Q2M389 1173 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 MAP1SQ66K74 1059 aaPredicted RBP20.86■□□□□ 0.93
RAB40B-208ENST00000573395 CIAPIN1Q6FI81 312 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 JMYQ8N9B5 988 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 BCL2L13Q9BXK5 485 aa20.86■□□□□ 0.93
RAB40B-208ENST00000573395 CNTROBQ8N137 903 aa20.85■□□□□ 0.93
RAB40B-208ENST00000573395 CCDC85AQ96PX6 553 aaPredicted RBP20.85■□□□□ 0.93
RAB40B-208ENST00000573395 EYA3Q99504 573 aa20.85■□□□□ 0.93
RAB40B-208ENST00000573395 PASKQ96RG2 1323 aa20.84■□□□□ 0.93
RAB40B-208ENST00000573395 RIMBP2O15034 1052 aa20.84■□□□□ 0.93
RAB40B-208ENST00000573395 RAD17O75943 681 aa20.84■□□□□ 0.93
RAB40B-208ENST00000573395 GPSM2P81274 684 aa20.84■□□□□ 0.93
RAB40B-208ENST00000573395 USP50Q70EL3 339 aaPredicted RBP20.84■□□□□ 0.93
RAB40B-208ENST00000573395 SEC31BQ9NQW1 1179 aa20.84■□□□□ 0.93
RAB40B-208ENST00000573395 G3V3G9 751 aa20.83■□□□□ 0.93
RAB40B-208ENST00000573395 GMPSP49915 693 aaPredicted RBP20.83■□□□□ 0.93
RAB40B-208ENST00000573395 EXOSC9Q06265 439 aaKnown RBP20.83■□□□□ 0.93
RAB40B-208ENST00000573395 FLIIQ13045 1269 aa20.83■□□□□ 0.93
RAB40B-208ENST00000573395 FKBP5Q13451 457 aaPredicted RBP20.83■□□□□ 0.93
RAB40B-208ENST00000573395 DCAF8Q5TAQ9 597 aa20.83■□□□□ 0.93
RAB40B-208ENST00000573395 G2E3Q7L622 706 aa20.83■□□□□ 0.93
RAB40B-208ENST00000573395 MYH16Q9H6N6 1097 aa20.83■□□□□ 0.93
RAB40B-208ENST00000573395 GPRC5DQ9NZD1 345 aa20.83■□□□□ 0.93
RAB40B-208ENST00000573395 ANKIB1Q9P2G1 1089 aa20.83■□□□□ 0.93
RAB40B-208ENST00000573395 MKRN1Q9UHC7 482 aaKnown RBP20.83■□□□□ 0.93
RAB40B-208ENST00000573395 TAF1P21675 1872 aa20.83■□□□□ 0.92
RAB40B-208ENST00000573395 CDHR2Q9BYE9 1310 aa20.82■□□□□ 0.92
RAB40B-208ENST00000573395 TMEM88BA6NKF7 163 aa20.82■□□□□ 0.92
RAB40B-208ENST00000573395 ITGBL1O95965 494 aaPredicted RBP20.82■□□□□ 0.92
RAB40B-208ENST00000573395 IGKV5-2P06315 115 aa20.82■□□□□ 0.92
RAB40B-208ENST00000573395 CWF19L2Q2TBE0 894 aaKnown RBP20.82■□□□□ 0.92
RAB40B-208ENST00000573395 ANKRD18AQ8IVF6 992 aa20.82■□□□□ 0.92
RAB40B-208ENST00000573395 ADARB2Q9NS39 739 aaKnown RBP20.82■□□□□ 0.92
RAB40B-208ENST00000573395 CTSWP56202 376 aa20.81■□□□□ 0.92
RAB40B-208ENST00000573395 CDC5LQ99459 802 aaKnown RBP20.81■□□□□ 0.92
RAB40B-208ENST00000573395 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
RAB40B-208ENST00000573395 NEURL1BA8MQ27 555 aa20.8■□□□□ 0.92
RAB40B-208ENST00000573395 VAMP4O75379 141 aa20.8■□□□□ 0.92
RAB40B-208ENST00000573395 ZC3H12CQ9C0D7 883 aaKnown RBP20.8■□□□□ 0.92
RAB40B-208ENST00000573395 DBNDD1Q9H9R9 158 aa20.8■□□□□ 0.92
RAB40B-208ENST00000573395 POLLQ9UGP5 575 aa20.8■□□□□ 0.92
RAB40B-208ENST00000573395 DUOX1Q9NRD9 1551 aa20.8■□□□□ 0.92
RAB40B-208ENST00000573395 UFL1O94874 794 aa20.79■□□□□ 0.92
RAB40B-208ENST00000573395 UBE3BQ7Z3V4 1068 aa20.79■□□□□ 0.92
RAB40B-208ENST00000573395 TBC1D16Q8TBP0 767 aa20.79■□□□□ 0.92
RAB40B-208ENST00000573395 DNAAF4Q8WXU2 420 aa20.79■□□□□ 0.92
RAB40B-208ENST00000573395 GGA1Q9UJY5 639 aa20.79■□□□□ 0.92
RAB40B-208ENST00000573395 ADAMTSL1Q8N6G6 1762 aa20.78■□□□□ 0.92
RAB40B-208ENST00000573395 YDJCA8MPS7 323 aa20.78■□□□□ 0.92
RAB40B-208ENST00000573395 H7C1D1 291 aa20.78■□□□□ 0.92
RAB40B-208ENST00000573395 DOK7Q18PE1 504 aa20.78■□□□□ 0.92
RAB40B-208ENST00000573395 LTBP1Q14766 1721 aa20.78■□□□□ 0.92
RAB40B-208ENST00000573395 ECE2O60344 883 aa20.77■□□□□ 0.92
RAB40B-208ENST00000573395 GPR101Q96P66 508 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms