RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 IRS4O14654 1257 aaPredicted RBP22.33■■□□□ 1.17
SMG6-212ENST00000573153 VAMP4O75379 141 aa22.33■■□□□ 1.17
SMG6-212ENST00000573153 RTL5Q5HYW3 569 aaPredicted RBP22.33■■□□□ 1.17
SMG6-212ENST00000573153 ZBTB38Q8NAP3 1195 aaPredicted RBP22.33■■□□□ 1.17
SMG6-212ENST00000573153 TAF1DQ9H5J8 278 aaPredicted RBP22.33■■□□□ 1.17
SMG6-212ENST00000573153 SALL2Q9Y467 1007 aaPredicted RBP22.33■■□□□ 1.17
SMG6-212ENST00000573153 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
SMG6-212ENST00000573153 MAP3K2Q9Y2U5 619 aa22.32■■□□□ 1.16
SMG6-212ENST00000573153 PI4KAP2A4QPH2 592 aa22.31■■□□□ 1.16
SMG6-212ENST00000573153 PCCAP05165 728 aaPredicted RBP22.31■■□□□ 1.16
SMG6-212ENST00000573153 KSR2Q6VAB6 950 aa22.31■■□□□ 1.16
SMG6-212ENST00000573153 DDX46Q7L014 1031 aaKnown RBP22.31■■□□□ 1.16
SMG6-212ENST00000573153 PI4KAP1Q8N8J0 262 aa22.31■■□□□ 1.16
SMG6-212ENST00000573153 AOC3Q16853 763 aa22.3■■□□□ 1.16
SMG6-212ENST00000573153 FAM9BQ8IZU0 186 aa22.3■■□□□ 1.16
SMG6-212ENST00000573153 JARID2Q92833 1246 aaPredicted RBP22.3■■□□□ 1.16
SMG6-212ENST00000573153 CACNA1FO60840 1977 aa22.29■■□□□ 1.16
SMG6-212ENST00000573153 EXOSC9Q06265 439 aaKnown RBP22.29■■□□□ 1.16
SMG6-212ENST00000573153 GPC2Q8N158 579 aa22.29■■□□□ 1.16
SMG6-212ENST00000573153 CDHR2Q9BYE9 1310 aa22.29■■□□□ 1.16
SMG6-212ENST00000573153 SCNN1DP51172 638 aa22.28■■□□□ 1.16
SMG6-212ENST00000573153 LARGE2Q8N3Y3 721 aa22.28■■□□□ 1.16
SMG6-212ENST00000573153 VPS33BQ9H267 617 aa22.28■■□□□ 1.16
SMG6-212ENST00000573153 SEC31BQ9NQW1 1179 aa22.28■■□□□ 1.16
SMG6-212ENST00000573153 CWC25Q9NXE8 425 aaPredicted RBP22.28■■□□□ 1.16
SMG6-212ENST00000573153 PPIP5K2O43314 1243 aa22.27■■□□□ 1.16
SMG6-212ENST00000573153 SLC4A2P04920 1241 aa22.27■■□□□ 1.16
SMG6-212ENST00000573153 KIAA2012Q0VF49 1180 aa22.27■■□□□ 1.16
SMG6-212ENST00000573153 MPNDQ8N594 471 aa22.27■■□□□ 1.16
SMG6-212ENST00000573153 JDP2Q8WYK2 163 aa22.27■■□□□ 1.16
SMG6-212ENST00000573153 IQCA1LA6NCM1 817 aa22.26■■□□□ 1.15
SMG6-212ENST00000573153 NEURL1BA8MQ27 555 aa22.26■■□□□ 1.15
SMG6-212ENST00000573153 DDX58O95786 925 aaKnown RBP22.26■■□□□ 1.15
SMG6-212ENST00000573153 FLIIQ13045 1269 aa22.26■■□□□ 1.15
SMG6-212ENST00000573153 CWF19L2Q2TBE0 894 aaKnown RBP22.26■■□□□ 1.15
SMG6-212ENST00000573153 CHADLQ6NUI6 762 aa22.26■■□□□ 1.15
SMG6-212ENST00000573153 DPP8Q6V1X1 898 aaPredicted RBP22.26■■□□□ 1.15
SMG6-212ENST00000573153 TMC4Q7Z404 712 aa22.26■■□□□ 1.15
SMG6-212ENST00000573153 PASKQ96RG2 1323 aa22.26■■□□□ 1.15
SMG6-212ENST00000573153 YDJCA8MPS7 323 aa22.25■■□□□ 1.15
SMG6-212ENST00000573153 CASP7P55210 303 aa22.25■■□□□ 1.15
SMG6-212ENST00000573153 STK31Q9BXU1 1019 aa22.25■■□□□ 1.15
SMG6-212ENST00000573153 HACL1Q9UJ83 578 aa22.25■■□□□ 1.15
SMG6-212ENST00000573153 PDE8AO60658 829 aa22.24■■□□□ 1.15
SMG6-212ENST00000573153 ITGBL1O95965 494 aaPredicted RBP22.24■■□□□ 1.15
SMG6-212ENST00000573153 EPHX2P34913 555 aa22.24■■□□□ 1.15
SMG6-212ENST00000573153 GPSM2P81274 684 aa22.24■■□□□ 1.15
SMG6-212ENST00000573153 CXCL9Q07325 125 aa22.24■■□□□ 1.15
SMG6-212ENST00000573153 LDHDQ86WU2 507 aa22.24■■□□□ 1.15
SMG6-212ENST00000573153 NIM1KQ8IY84 436 aa22.23■■□□□ 1.15
SMG6-212ENST00000573153 SUPT20HQ8NEM7 779 aa22.23■■□□□ 1.15
SMG6-212ENST00000573153 KLRG1Q96E93 195 aa22.23■■□□□ 1.15
SMG6-212ENST00000573153 POLLQ9UGP5 575 aa22.23■■□□□ 1.15
SMG6-212ENST00000573153 MYH3P11055 1940 aa22.23■■□□□ 1.15
SMG6-212ENST00000573153 H7C1W4 665 aa22.22■■□□□ 1.15
SMG6-212ENST00000573153 EIF6P56537 245 aaKnown RBP22.22■■□□□ 1.15
SMG6-212ENST00000573153 RPS8P62241 208 aaKnown RBP22.22■■□□□ 1.15
SMG6-212ENST00000573153 ZNRF3Q9ULT6 936 aa22.22■■□□□ 1.15
SMG6-212ENST00000573153 EPS15P42566 896 aa22.21■■□□□ 1.15
SMG6-212ENST00000573153 JMYQ8N9B5 988 aa22.21■■□□□ 1.15
SMG6-212ENST00000573153 RTL9Q8NET4 1388 aa22.21■■□□□ 1.15
SMG6-212ENST00000573153 CTSWP56202 376 aa22.2■■□□□ 1.14
SMG6-212ENST00000573153 TTLL11Q8NHH1 800 aa22.2■■□□□ 1.14
SMG6-212ENST00000573153 PODXL2Q9NZ53 605 aa22.2■■□□□ 1.14
SMG6-212ENST00000573153 GJA3Q9Y6H8 435 aa22.2■■□□□ 1.14
SMG6-212ENST00000573153 SCN9AQ15858 1988 aa22.19■■□□□ 1.14
SMG6-212ENST00000573153 GCKRQ14397 625 aa22.19■■□□□ 1.14
SMG6-212ENST00000573153 TBC1D16Q8TBP0 767 aa22.19■■□□□ 1.14
SMG6-212ENST00000573153 DNAAF4Q8WXU2 420 aa22.19■■□□□ 1.14
SMG6-212ENST00000573153 GPR101Q96P66 508 aaPredicted RBP22.19■■□□□ 1.14
SMG6-212ENST00000573153 CCDC85AQ96PX6 553 aaPredicted RBP22.19■■□□□ 1.14
SMG6-212ENST00000573153 PLA2G12BQ9BX93 195 aa22.19■■□□□ 1.14
SMG6-212ENST00000573153 CCDC152Q4G0S7 254 aa22.18■■□□□ 1.14
SMG6-212ENST00000573153 MYH16Q9H6N6 1097 aa22.18■■□□□ 1.14
SMG6-212ENST00000573153 NSFL1CQ9UNZ2 370 aaKnown RBP22.18■■□□□ 1.14
SMG6-212ENST00000573153 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
SMG6-212ENST00000573153 TMX4Q9H1E5 349 aaPredicted RBP22.17■■□□□ 1.14
SMG6-212ENST00000573153 GREM2Q9H772 168 aa22.17■■□□□ 1.14
SMG6-212ENST00000573153 GPRC5DQ9NZD1 345 aa22.17■■□□□ 1.14
SMG6-212ENST00000573153 ZNF646O15015 1829 aaPredicted RBP22.17■■□□□ 1.14
SMG6-212ENST00000573153 F6X3S4 739 aa22.16■■□□□ 1.14
SMG6-212ENST00000573153 FKBP5Q13451 457 aaPredicted RBP22.16■■□□□ 1.14
SMG6-212ENST00000573153 EAPPQ56P03 285 aaPredicted RBP22.16■■□□□ 1.14
SMG6-212ENST00000573153 BEND3Q5T5X7 828 aa22.16■■□□□ 1.14
SMG6-212ENST00000573153 UBE3BQ7Z3V4 1068 aa22.16■■□□□ 1.14
SMG6-212ENST00000573153 PNMA8AQ86V59 439 aaPredicted RBP22.16■■□□□ 1.14
SMG6-212ENST00000573153 LINS1Q8NG48 757 aa22.16■■□□□ 1.14
SMG6-212ENST00000573153 SHTN1A0MZ66 631 aa22.15■■□□□ 1.14
SMG6-212ENST00000573153 WTIPA6NIX2 430 aaPredicted RBP22.15■■□□□ 1.14
SMG6-212ENST00000573153 RAD17O75943 681 aa22.15■■□□□ 1.14
SMG6-212ENST00000573153 GMPSP49915 693 aaPredicted RBP22.15■■□□□ 1.14
SMG6-212ENST00000573153 NEXNQ0ZGT2 675 aa22.15■■□□□ 1.14
SMG6-212ENST00000573153 MAP1SQ66K74 1059 aaPredicted RBP22.15■■□□□ 1.14
SMG6-212ENST00000573153 KCNQ5Q9NR82 932 aa22.15■■□□□ 1.14
SMG6-212ENST00000573153 CCER2I3L3R5 266 aa22.14■■□□□ 1.13
SMG6-212ENST00000573153 HSP90B1P14625 803 aaKnown RBP22.14■■□□□ 1.13
SMG6-212ENST00000573153 WASHC4Q2M389 1173 aa22.14■■□□□ 1.13
SMG6-212ENST00000573153 CIAPIN1Q6FI81 312 aa22.14■■□□□ 1.13
SMG6-212ENST00000573153 CREBZFQ9NS37 354 aa22.14■■□□□ 1.13
SMG6-212ENST00000573153 PSME4Q14997 1843 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms