RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 HSPA1BP0DMV9 641 aaKnown RBP25.07■■□□□ 1.6
HCFC1R1-204ENST00000573095 ATP5J2-PTCD1G3V325 749 aa25.06■■□□□ 1.6
HCFC1R1-204ENST00000573095 TRIM28Q13263 835 aaKnown RBP25.06■■□□□ 1.6
HCFC1R1-204ENST00000573095 MPNDQ8N594 471 aa25.06■■□□□ 1.6
HCFC1R1-204ENST00000573095 MKRN1Q9UHC7 482 aaKnown RBP25.06■■□□□ 1.6
HCFC1R1-204ENST00000573095 COL4A1P02462 1669 aa25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 TMEM88BA6NKF7 163 aa25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 KIAA2012Q0VF49 1180 aa25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 SF3B3Q15393 1217 aaKnown RBP25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 MAP1SQ66K74 1059 aaPredicted RBP25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 CNTROBQ8N137 903 aa25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 ZNF428Q96B54 188 aa25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 FAM89AQ96GI7 184 aa25.05■■□□□ 1.6
HCFC1R1-204ENST00000573095 GOLGA2Q08379 1002 aa25.04■■□□□ 1.6
HCFC1R1-204ENST00000573095 ZNRF3Q9ULT6 936 aa25.04■■□□□ 1.6
HCFC1R1-204ENST00000573095 EPS15P42566 896 aa25.03■■□□□ 1.6
HCFC1R1-204ENST00000573095 COL13A1Q5TAT6 717 aaPredicted RBP25.03■■□□□ 1.6
HCFC1R1-204ENST00000573095 USP50Q70EL3 339 aaPredicted RBP25.02■■□□□ 1.6
HCFC1R1-204ENST00000573095 TRPM7Q96QT4 1865 aa25.02■■□□□ 1.6
HCFC1R1-204ENST00000573095 ELL2O00472 640 aaPredicted RBP25.01■■□□□ 1.59
HCFC1R1-204ENST00000573095 CXCL9Q07325 125 aa25.01■■□□□ 1.59
HCFC1R1-204ENST00000573095 RIC3Q7Z5B4 369 aa25.01■■□□□ 1.59
HCFC1R1-204ENST00000573095 C8orf58Q8NAV2 365 aa25.01■■□□□ 1.59
HCFC1R1-204ENST00000573095 PHAXQ9H814 394 aaKnown RBP25.01■■□□□ 1.59
HCFC1R1-204ENST00000573095 CDHR2Q9BYE9 1310 aa25.01■■□□□ 1.59
HCFC1R1-204ENST00000573095 IRS4O14654 1257 aaPredicted RBP25■■□□□ 1.59
HCFC1R1-204ENST00000573095 CELF1Q92879 486 aaKnown RBP25■■□□□ 1.59
HCFC1R1-204ENST00000573095 GPRC5DQ9NZD1 345 aa25■■□□□ 1.59
HCFC1R1-204ENST00000573095 ZBTB38Q8NAP3 1195 aaPredicted RBP24.99■■□□□ 1.59
HCFC1R1-204ENST00000573095 CHMP4AQ9BY43 222 aa24.99■■□□□ 1.59
HCFC1R1-204ENST00000573095 ADARB2Q9NS39 739 aaKnown RBP24.99■■□□□ 1.59
HCFC1R1-204ENST00000573095 CCDC184Q52MB2 194 aa24.98■■□□□ 1.59
HCFC1R1-204ENST00000573095 RTL5Q5HYW3 569 aaPredicted RBP24.98■■□□□ 1.59
HCFC1R1-204ENST00000573095 CIAPIN1Q6FI81 312 aa24.98■■□□□ 1.59
HCFC1R1-204ENST00000573095 RASSF10A6NK89 507 aa24.97■■□□□ 1.59
HCFC1R1-204ENST00000573095 CCDC27Q2M243 656 aa24.97■■□□□ 1.59
HCFC1R1-204ENST00000573095 CCDC30Q5VVM6 783 aa24.97■■□□□ 1.59
HCFC1R1-204ENST00000573095 THSD7BQ9C0I4 1608 aa24.97■■□□□ 1.59
HCFC1R1-204ENST00000573095 HSP90B1P14625 803 aaKnown RBP24.96■■□□□ 1.59
HCFC1R1-204ENST00000573095 GMPSP49915 693 aaPredicted RBP24.96■■□□□ 1.59
HCFC1R1-204ENST00000573095 CCDC191Q8NCU4 936 aa24.96■■□□□ 1.59
HCFC1R1-204ENST00000573095 MYD88Q99836 296 aa24.96■■□□□ 1.59
HCFC1R1-204ENST00000573095 YDJCA8MPS7 323 aa24.95■■□□□ 1.58
HCFC1R1-204ENST00000573095 DDX58O95786 925 aaKnown RBP24.95■■□□□ 1.58
HCFC1R1-204ENST00000573095 VEGFBP49765 207 aa24.95■■□□□ 1.58
HCFC1R1-204ENST00000573095 RAD17O75943 681 aa24.94■■□□□ 1.58
HCFC1R1-204ENST00000573095 PCCAP05165 728 aaPredicted RBP24.94■■□□□ 1.58
HCFC1R1-204ENST00000573095 TNIP1Q15025 636 aa24.94■■□□□ 1.58
HCFC1R1-204ENST00000573095 TSPYL6Q8N831 410 aa24.94■■□□□ 1.58
HCFC1R1-204ENST00000573095 METTL22Q9BUU2 404 aaPredicted RBP24.94■■□□□ 1.58
HCFC1R1-204ENST00000573095 NSFL1CQ9UNZ2 370 aaKnown RBP24.94■■□□□ 1.58
HCFC1R1-204ENST00000573095 MYH3P11055 1940 aa24.94■■□□□ 1.58
HCFC1R1-204ENST00000573095 CWC25Q9NXE8 425 aaPredicted RBP24.93■■□□□ 1.58
HCFC1R1-204ENST00000573095 RPS8P62241 208 aaKnown RBP24.92■■□□□ 1.58
HCFC1R1-204ENST00000573095 WASHC4Q2M389 1173 aa24.92■■□□□ 1.58
HCFC1R1-204ENST00000573095 TSR2Q969E8 191 aaKnown RBP24.92■■□□□ 1.58
HCFC1R1-204ENST00000573095 BCL2L13Q9BXK5 485 aa24.92■■□□□ 1.58
HCFC1R1-204ENST00000573095 GPSM2P81274 684 aa24.91■■□□□ 1.58
HCFC1R1-204ENST00000573095 DEFB115Q30KQ5 88 aa24.91■■□□□ 1.58
HCFC1R1-204ENST00000573095 NCBP3Q53F19 620 aaKnown RBP24.91■■□□□ 1.58
HCFC1R1-204ENST00000573095 WWC1Q8IX03 1113 aa24.91■■□□□ 1.58
HCFC1R1-204ENST00000573095 TNS4Q8IZW8 715 aa24.91■■□□□ 1.58
HCFC1R1-204ENST00000573095 POLLQ9UGP5 575 aa24.91■■□□□ 1.58
HCFC1R1-204ENST00000573095 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
HCFC1R1-204ENST00000573095 EYA3Q99504 573 aa24.9■■□□□ 1.58
HCFC1R1-204ENST00000573095 ABT1Q9ULW3 272 aaKnown RBP24.9■■□□□ 1.58
HCFC1R1-204ENST00000573095 MAP3K2Q9Y2U5 619 aa24.9■■□□□ 1.58
HCFC1R1-204ENST00000573095 IL16Q14005 1332 aa24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 C6orf229H3BNL8 230 aa24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 PDE8AO60658 829 aa24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 FMR1Q06787 632 aaKnown RBP eCLIP24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 CCDC152Q4G0S7 254 aa24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 DBNDD1Q9H9R9 158 aa24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 PODXL2Q9NZ53 605 aa24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 PGAP2Q9UHJ9 254 aa24.89■■□□□ 1.58
HCFC1R1-204ENST00000573095 CACNA1FO60840 1977 aa24.89■■□□□ 1.57
HCFC1R1-204ENST00000573095 SCN9AQ15858 1988 aa24.89■■□□□ 1.57
HCFC1R1-204ENST00000573095 PSME4Q14997 1843 aa24.89■■□□□ 1.57
HCFC1R1-204ENST00000573095 TRAF5O00463 557 aa24.88■■□□□ 1.57
HCFC1R1-204ENST00000573095 FOXN1O15353 648 aa24.88■■□□□ 1.57
HCFC1R1-204ENST00000573095 KSR2Q6VAB6 950 aa24.88■■□□□ 1.57
HCFC1R1-204ENST00000573095 TBC1D16Q8TBP0 767 aa24.88■■□□□ 1.57
HCFC1R1-204ENST00000573095 ZC3H15Q8WU90 426 aaKnown RBP24.88■■□□□ 1.57
HCFC1R1-204ENST00000573095 STK31Q9BXU1 1019 aa24.88■■□□□ 1.57
HCFC1R1-204ENST00000573095 SEC31BQ9NQW1 1179 aa24.88■■□□□ 1.57
HCFC1R1-204ENST00000573095 TRPM4Q8TD43 1214 aa24.87■■□□□ 1.57
HCFC1R1-204ENST00000573095 WDR33Q9C0J8 1336 aaKnown RBP24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 SPEF2Q9C093 1822 aa24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 PSMD14O00487 310 aa24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 RIMBP2O15034 1052 aa24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 ECE2O60344 883 aa24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 TWISTNBQ3B726 338 aaPredicted RBP24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 CST9Q5W186 159 aa24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 DPF2Q92785 391 aa24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 MRS2Q9HD23 443 aa24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 CNOT7Q9UIV1 285 aaKnown RBP24.86■■□□□ 1.57
HCFC1R1-204ENST00000573095 RTL9Q8NET4 1388 aa24.85■■□□□ 1.57
HCFC1R1-204ENST00000573095 PI4KAP2A4QPH2 592 aa24.85■■□□□ 1.57
HCFC1R1-204ENST00000573095 IGKV5-2P06315 115 aa24.85■■□□□ 1.57
HCFC1R1-204ENST00000573095 HIRAP54198 1017 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms