RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 ERFEQ4G0M1 354 aa9.95□□□□□ -0.82
SMG6-211ENST00000572369 MYD88Q99836 296 aa9.95□□□□□ -0.82
SMG6-211ENST00000572369 TRMT112Q9UI30 125 aaKnown RBP9.95□□□□□ -0.82
SMG6-211ENST00000572369 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
SMG6-211ENST00000572369 ZNF521Q96K83 1311 aa9.95□□□□□ -0.82
SMG6-211ENST00000572369 IBTKQ9P2D0 1353 aaPredicted RBP9.94□□□□□ -0.82
SMG6-211ENST00000572369 MAP2K2P36507 400 aa9.94□□□□□ -0.82
SMG6-211ENST00000572369 NEXNQ0ZGT2 675 aa9.94□□□□□ -0.82
SMG6-211ENST00000572369 FKBP5Q13451 457 aaPredicted RBP9.94□□□□□ -0.82
SMG6-211ENST00000572369 NLRP10Q86W26 655 aa9.94□□□□□ -0.82
SMG6-211ENST00000572369 RPGRQ92834 1020 aaKnown RBP9.94□□□□□ -0.82
SMG6-211ENST00000572369 MASTLQ96GX5 879 aa9.94□□□□□ -0.82
SMG6-211ENST00000572369 MAP3K2Q9Y2U5 619 aa9.94□□□□□ -0.82
SMG6-211ENST00000572369 PI4KAP2A4QPH2 592 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 IQCA1LA6NCM1 817 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 AOC2O75106 756 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 NTSR2O95665 410 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 SRGNP10124 158 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 NPR1P16066 1061 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 SLFN5Q08AF3 891 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
SMG6-211ENST00000572369 STYK1Q6J9G0 422 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 KSR2Q6VAB6 950 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 PI4KAP1Q8N8J0 262 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 CNKSR1Q969H4 720 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 NLRP3Q96P20 1036 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 CCDC88AQ3V6T2 1871 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 ADAMTSL1Q8N6G6 1762 aa9.93□□□□□ -0.82
SMG6-211ENST00000572369 ABCC12Q96J65 1359 aa9.92□□□□□ -0.82
SMG6-211ENST00000572369 RNF123Q5XPI4 1314 aa9.92□□□□□ -0.82
SMG6-211ENST00000572369 SH3TC1Q8TE82 1336 aa9.92□□□□□ -0.82
SMG6-211ENST00000572369 ALDH1B1P30837 517 aa9.92□□□□□ -0.82
SMG6-211ENST00000572369 FLIIQ13045 1269 aa9.92□□□□□ -0.82
SMG6-211ENST00000572369 G2E3Q7L622 706 aa9.92□□□□□ -0.82
SMG6-211ENST00000572369 METTL22Q9BUU2 404 aaPredicted RBP9.92□□□□□ -0.82
SMG6-211ENST00000572369 TAF1DQ9H5J8 278 aaPredicted RBP9.92□□□□□ -0.82
SMG6-211ENST00000572369 LAMB2P55268 1798 aa9.92□□□□□ -0.82
SMG6-211ENST00000572369 MKI67P46013 3256 aaKnown RBP9.92□□□□□ -0.82
SMG6-211ENST00000572369 NFKBIEO00221 500 aa9.91□□□□□ -0.82
SMG6-211ENST00000572369 C21orf2O43822 256 aa9.91□□□□□ -0.82
SMG6-211ENST00000572369 DDNO94850 711 aaPredicted RBP9.91□□□□□ -0.82
SMG6-211ENST00000572369 HCLS1P14317 486 aaPredicted RBP9.91□□□□□ -0.82
SMG6-211ENST00000572369 BRPF1P55201 1214 aaPredicted RBP9.91□□□□□ -0.82
SMG6-211ENST00000572369 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
SMG6-211ENST00000572369 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
SMG6-211ENST00000572369 RBM17Q96I25 401 aaKnown RBP9.91□□□□□ -0.82
SMG6-211ENST00000572369 ISCA1Q9BUE6 129 aa9.91□□□□□ -0.82
SMG6-211ENST00000572369 CWC25Q9NXE8 425 aaPredicted RBP9.91□□□□□ -0.82
SMG6-211ENST00000572369 SCN4AP35499 1836 aa9.91□□□□□ -0.82
SMG6-211ENST00000572369 SLX4Q8IY92 1834 aa9.91□□□□□ -0.82
SMG6-211ENST00000572369 DDX60Q8IY21 1712 aaKnown RBP9.9□□□□□ -0.82
SMG6-211ENST00000572369 HSP90B1P14625 803 aaKnown RBP9.9□□□□□ -0.82
SMG6-211ENST00000572369 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
SMG6-211ENST00000572369 SYNE4Q8N205 404 aa9.9□□□□□ -0.82
SMG6-211ENST00000572369 CCDC191Q8NCU4 936 aa9.9□□□□□ -0.82
SMG6-211ENST00000572369 TMX4Q9H1E5 349 aaPredicted RBP9.9□□□□□ -0.82
SMG6-211ENST00000572369 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
SMG6-211ENST00000572369 RIC1Q4ADV7 1423 aa9.9□□□□□ -0.83
SMG6-211ENST00000572369 KLRG2A4D1S0 409 aaPredicted RBP9.89□□□□□ -0.83
SMG6-211ENST00000572369 IRS4O14654 1257 aaPredicted RBP9.89□□□□□ -0.83
SMG6-211ENST00000572369 TRIM28Q13263 835 aaKnown RBP9.89□□□□□ -0.83
SMG6-211ENST00000572369 CWF19L2Q2TBE0 894 aaKnown RBP9.89□□□□□ -0.83
SMG6-211ENST00000572369 SLC10A5Q5PT55 438 aa9.89□□□□□ -0.83
SMG6-211ENST00000572369 SOGA3Q5TF21 947 aa9.89□□□□□ -0.83
SMG6-211ENST00000572369 DDX46Q7L014 1031 aaKnown RBP9.89□□□□□ -0.83
SMG6-211ENST00000572369 CNTROBQ8N137 903 aa9.89□□□□□ -0.83
SMG6-211ENST00000572369 DNAAF4Q8WXU2 420 aa9.89□□□□□ -0.83
SMG6-211ENST00000572369 COLQQ9Y215 455 aaPredicted RBP9.89□□□□□ -0.83
SMG6-211ENST00000572369 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
SMG6-211ENST00000572369 PCCAP05165 728 aaPredicted RBP9.88□□□□□ -0.83
SMG6-211ENST00000572369 CRY2Q49AN0 593 aa9.88□□□□□ -0.83
SMG6-211ENST00000572369 CCDC93Q567U6 631 aa9.88□□□□□ -0.83
SMG6-211ENST00000572369 MAP1SQ66K74 1059 aaPredicted RBP9.88□□□□□ -0.83
SMG6-211ENST00000572369 SLC4A10Q6U841 1118 aa9.88□□□□□ -0.83
SMG6-211ENST00000572369 ZBTB38Q8NAP3 1195 aaPredicted RBP9.88□□□□□ -0.83
SMG6-211ENST00000572369 JARID2Q92833 1246 aaPredicted RBP9.88□□□□□ -0.83
SMG6-211ENST00000572369 L3MBTL3Q96JM7 780 aaPredicted RBP9.88□□□□□ -0.83
SMG6-211ENST00000572369 BCL2L13Q9BXK5 485 aa9.88□□□□□ -0.83
SMG6-211ENST00000572369 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
SMG6-211ENST00000572369 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
SMG6-211ENST00000572369 MYH3P11055 1940 aa9.88□□□□□ -0.83
SMG6-211ENST00000572369 FER1L6Q2WGJ9 1857 aa9.87□□□□□ -0.83
SMG6-211ENST00000572369 NEURL1BA8MQ27 555 aa9.87□□□□□ -0.83
SMG6-211ENST00000572369 F6X3S4 739 aa9.87□□□□□ -0.83
SMG6-211ENST00000572369 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
SMG6-211ENST00000572369 CT47B1P0C2W7 299 aaPredicted RBP9.87□□□□□ -0.83
SMG6-211ENST00000572369 CRAMP1Q96RY5 1269 aa9.87□□□□□ -0.83
SMG6-211ENST00000572369 UNC80Q8N2C7 3258 aa9.87□□□□□ -0.83
SMG6-211ENST00000572369 TAF1P21675 1872 aa9.87□□□□□ -0.83
SMG6-211ENST00000572369 PDE8AO60658 829 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 IGKV5-2P06315 115 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 ALDH1L2Q3SY69 923 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 CIAPIN1Q6FI81 312 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 C3orf67Q6ZVT6 689 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 UBE3BQ7Z3V4 1068 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 TRMT2AQ8IZ69 625 aaKnown RBP9.86□□□□□ -0.83
SMG6-211ENST00000572369 MRPL50Q8N5N7 158 aaKnown RBP9.86□□□□□ -0.83
SMG6-211ENST00000572369 LINS1Q8NG48 757 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 SSH1Q8WYL5 1049 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms