RNA–Protein interactions for RNA: ENST00000571489.5

PCTP-204, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best)

Gene PCTP, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-204ENST00000571489 BEND3Q5T5X7 828 aa8.93□□□□□ -0.98
PCTP-204ENST00000571489 ZSCAN25Q6NSZ9 544 aa8.93□□□□□ -0.98
PCTP-204ENST00000571489 CCAR2Q8N163 923 aaKnown RBP8.93□□□□□ -0.98
PCTP-204ENST00000571489 PREX1Q8TCU6 1659 aa8.93□□□□□ -0.98
PCTP-204ENST00000571489 Q6ZUG5 572 aa8.93□□□□□ -0.98
PCTP-204ENST00000571489 LUZP1Q86V48 1076 aa8.93□□□□□ -0.98
PCTP-204ENST00000571489 SMAP1Q8IYB5 467 aaPredicted RBP8.93□□□□□ -0.98
PCTP-204ENST00000571489 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
PCTP-204ENST00000571489 CD163L1Q9NR16 1453 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 ATL3Q6DD88 541 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 ANKRD20A12PQ8NF67 263 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 XAGE3Q8WTP9 111 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
PCTP-204ENST00000571489 CLSTN2Q9H4D0 955 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 SNRPA1P09661 255 aaKnown RBP8.92□□□□□ -0.98
PCTP-204ENST00000571489 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
PCTP-204ENST00000571489 POLA2Q14181 598 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 CEP135Q66GS9 1140 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 BICC1Q9H694 974 aaKnown RBP8.92□□□□□ -0.98
PCTP-204ENST00000571489 AKAP2Q9Y2D5 859 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
PCTP-204ENST00000571489 GUCY1B3Q02153 619 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 SART3Q15020 963 aaKnown RBP8.92□□□□□ -0.98
PCTP-204ENST00000571489 ME3Q16798 604 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 COPS6Q7L5N1 327 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 FAM227BQ96M60 508 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 LGR6Q9HBX8 967 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 PLEKHG1Q9ULL1 1385 aa8.92□□□□□ -0.98
PCTP-204ENST00000571489 IFT172Q9UG01 1749 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 GOLIM4O00461 696 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 PTH1RQ03431 593 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 DDX46Q7L014 1031 aaKnown RBP8.91□□□□□ -0.98
PCTP-204ENST00000571489 LEO1Q8WVC0 666 aaPredicted RBP8.91□□□□□ -0.98
PCTP-204ENST00000571489 DACH1Q9UI36 760 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 SLC3A2P08195 630 aaKnown RBP8.91□□□□□ -0.98
PCTP-204ENST00000571489 IFNL2Q8IZJ0 200 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 GOLGA6L1Q8N7Z2 621 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 PDILTQ8N807 584 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 LRRC59Q96AG4 307 aaKnown RBP8.91□□□□□ -0.98
PCTP-204ENST00000571489 CDC42BPGQ6DT37 1551 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 SKILP12757 684 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 KCNA6P17658 529 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 TSR1Q2NL82 804 aaKnown RBP8.91□□□□□ -0.98
PCTP-204ENST00000571489 DHX32Q7L7V1 743 aaKnown RBP8.91□□□□□ -0.98
PCTP-204ENST00000571489 CCDC150Q8NCX0 1101 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 PI4K2BQ8TCG2 481 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 LLPHQ9BRT6 129 aaKnown RBP8.91□□□□□ -0.98
PCTP-204ENST00000571489 CRB1P82279 1406 aa8.91□□□□□ -0.98
PCTP-204ENST00000571489 NPHP1O15259 732 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 XBP1P17861 261 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 FAM173BQ6P4H8 233 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 KIF6Q6ZMV9 814 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 CDC37L1Q7L3B6 337 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 RASSF8Q8NHQ8 419 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 MRPS27Q92552 414 aaKnown RBP8.9□□□□□ -0.98
PCTP-204ENST00000571489 CBX8Q9HC52 389 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 TRIM22Q8IYM9 498 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 C17orf53Q8N3J3 647 aaPredicted RBP8.9□□□□□ -0.98
PCTP-204ENST00000571489 KCNG4Q8TDN1 519 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 ELP1O95163 1332 aa8.9□□□□□ -0.98
PCTP-204ENST00000571489 KDRP35968 1356 aa8.9□□□□□ -0.99
PCTP-204ENST00000571489 ZNF75DP51815 510 aa8.9□□□□□ -0.99
PCTP-204ENST00000571489 TTC6Q86TZ1 520 aa8.9□□□□□ -0.99
PCTP-204ENST00000571489 UBXN4Q92575 508 aa8.9□□□□□ -0.99
PCTP-204ENST00000571489 SUCLG2Q96I99 432 aa8.9□□□□□ -0.99
PCTP-204ENST00000571489 TRMT1Q9NXH9 659 aaKnown RBP8.9□□□□□ -0.99
PCTP-204ENST00000571489 ORC3Q9UBD5 711 aaPredicted RBP8.9□□□□□ -0.99
PCTP-204ENST00000571489 GOLGA8BA8MQT2 603 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 EVA1CP58658 441 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 CFAP100Q494V2 611 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 TAF3Q5VWG9 929 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 NBPF6Q5VWK0 638 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 NBPF4Q96M43 638 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 FEZ1Q99689 392 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 LRRC2Q9BYS8 371 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 GTPBP4Q9BZE4 634 aaKnown RBP8.89□□□□□ -0.99
PCTP-204ENST00000571489 KIF20BQ96Q89 1820 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 ATP5J2-PTCD1G3V325 749 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 RIOK3O14730 519 aaKnown RBP8.89□□□□□ -0.99
PCTP-204ENST00000571489 PTCD1O75127 700 aaKnown RBP8.89□□□□□ -0.99
PCTP-204ENST00000571489 CREBRFQ8IUR6 639 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 MAP4K1Q92918 833 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 CNNM1Q9NRU3 951 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 TPCN1Q9ULQ1 816 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 USP16Q9Y5T5 823 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 USP31Q70CQ4 1352 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 PTPDC1A2A3K4 754 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 ZSCAN12O43309 604 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 ZFYP08048 801 aaPredicted RBP8.89□□□□□ -0.99
PCTP-204ENST00000571489 SNW1Q13573 536 aaKnown RBP8.89□□□□□ -0.99
PCTP-204ENST00000571489 WASF1Q92558 559 aa8.89□□□□□ -0.99
PCTP-204ENST00000571489 CWC25Q9NXE8 425 aaPredicted RBP8.89□□□□□ -0.99
PCTP-204ENST00000571489 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
PCTP-204ENST00000571489 GCP02774 474 aa8.88□□□□□ -0.99
PCTP-204ENST00000571489 TUBB4AP04350 444 aa8.88□□□□□ -0.99
PCTP-204ENST00000571489 LIG1P18858 919 aa8.88□□□□□ -0.99
PCTP-204ENST00000571489 IL15P40933 162 aaPredicted RBP8.88□□□□□ -0.99
PCTP-204ENST00000571489 FILIP1LQ4L180 1135 aa8.88□□□□□ -0.99
PCTP-204ENST00000571489 LMBR1LQ6UX01 489 aa8.88□□□□□ -0.99
PCTP-204ENST00000571489 TMC6Q7Z403 805 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms