RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 TMX4Q9H1E5 349 aaPredicted RBP22.89■■□□□ 1.25
CIITA-206ENST00000571190 MBIPQ9NS73 344 aa22.89■■□□□ 1.25
CIITA-206ENST00000571190 DBF4Q9UBU7 674 aaPredicted RBP22.89■■□□□ 1.25
CIITA-206ENST00000571190 ZNRF3Q9ULT6 936 aa22.89■■□□□ 1.25
CIITA-206ENST00000571190 CAPN15O75808 1086 aa22.88■■□□□ 1.25
CIITA-206ENST00000571190 KIAA2012Q0VF49 1180 aa22.88■■□□□ 1.25
CIITA-206ENST00000571190 DUSP27Q5VZP5 1158 aa22.88■■□□□ 1.25
CIITA-206ENST00000571190 GPRC5DQ9NZD1 345 aa22.88■■□□□ 1.25
CIITA-206ENST00000571190 ATP5J2-PTCD1G3V325 749 aa22.87■■□□□ 1.25
CIITA-206ENST00000571190 DEFB115Q30KQ5 88 aa22.87■■□□□ 1.25
CIITA-206ENST00000571190 FAM89AQ96GI7 184 aa22.87■■□□□ 1.25
CIITA-206ENST00000571190 WBP1LQ9NX94 342 aa22.86■■□□□ 1.25
CIITA-206ENST00000571190 TRAF5O00463 557 aa22.85■■□□□ 1.25
CIITA-206ENST00000571190 GMPSP49915 693 aaPredicted RBP22.85■■□□□ 1.25
CIITA-206ENST00000571190 SF3B3Q15393 1217 aaKnown RBP22.85■■□□□ 1.25
CIITA-206ENST00000571190 CST9Q5W186 159 aa22.85■■□□□ 1.25
CIITA-206ENST00000571190 ADARB2Q9NS39 739 aaKnown RBP22.85■■□□□ 1.25
CIITA-206ENST00000571190 HYPKQ9NX55 129 aa22.85■■□□□ 1.25
CIITA-206ENST00000571190 YDJCA8MPS7 323 aa22.84■■□□□ 1.25
CIITA-206ENST00000571190 APAF1O14727 1248 aa22.84■■□□□ 1.25
CIITA-206ENST00000571190 TRIM28Q13263 835 aaKnown RBP22.84■■□□□ 1.25
CIITA-206ENST00000571190 CELF1Q92879 486 aaKnown RBP22.84■■□□□ 1.25
CIITA-206ENST00000571190 RAD17O75943 681 aa22.83■■□□□ 1.25
CIITA-206ENST00000571190 CIAPIN1Q6FI81 312 aa22.83■■□□□ 1.25
CIITA-206ENST00000571190 TMC4Q7Z404 712 aa22.82■■□□□ 1.24
CIITA-206ENST00000571190 ABT1Q9ULW3 272 aaKnown RBP22.82■■□□□ 1.24
CIITA-206ENST00000571190 WDR33Q9C0J8 1336 aaKnown RBP22.82■■□□□ 1.24
CIITA-206ENST00000571190 HIRAP54198 1017 aaPredicted RBP22.81■■□□□ 1.24
CIITA-206ENST00000571190 RTL5Q5HYW3 569 aaPredicted RBP22.81■■□□□ 1.24
CIITA-206ENST00000571190 PHAXQ9H814 394 aaKnown RBP22.81■■□□□ 1.24
CIITA-206ENST00000571190 PRDM10Q9NQV6 1147 aa22.81■■□□□ 1.24
CIITA-206ENST00000571190 IFT57Q9NWB7 429 aa22.81■■□□□ 1.24
CIITA-206ENST00000571190 PGAP2Q9UHJ9 254 aa22.81■■□□□ 1.24
CIITA-206ENST00000571190 DUOX1Q9NRD9 1551 aa22.8■■□□□ 1.24
CIITA-206ENST00000571190 ELL2O00472 640 aaPredicted RBP22.8■■□□□ 1.24
CIITA-206ENST00000571190 CTCFP49711 727 aaPredicted RBP22.8■■□□□ 1.24
CIITA-206ENST00000571190 SHTN1A0MZ66 631 aa22.79■■□□□ 1.24
CIITA-206ENST00000571190 IRS4O14654 1257 aaPredicted RBP22.79■■□□□ 1.24
CIITA-206ENST00000571190 POLLQ9UGP5 575 aa22.79■■□□□ 1.24
CIITA-206ENST00000571190 CDHR2Q9BYE9 1310 aa22.79■■□□□ 1.24
CIITA-206ENST00000571190 COL4A1P02462 1669 aa22.78■■□□□ 1.24
CIITA-206ENST00000571190 GPSM2P81274 684 aa22.78■■□□□ 1.24
CIITA-206ENST00000571190 TNIP1Q15025 636 aa22.78■■□□□ 1.24
CIITA-206ENST00000571190 C8orf58Q8NAV2 365 aa22.78■■□□□ 1.24
CIITA-206ENST00000571190 TRPM4Q8TD43 1214 aa22.78■■□□□ 1.24
CIITA-206ENST00000571190 AIDAQ96BJ3 306 aa22.78■■□□□ 1.24
CIITA-206ENST00000571190 NSFL1CQ9UNZ2 370 aaKnown RBP22.78■■□□□ 1.24
CIITA-206ENST00000571190 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
CIITA-206ENST00000571190 GNAI1P63096 354 aa22.77■■□□□ 1.24
CIITA-206ENST00000571190 RIC3Q7Z5B4 369 aa22.77■■□□□ 1.24
CIITA-206ENST00000571190 BCL2L13Q9BXK5 485 aa22.77■■□□□ 1.24
CIITA-206ENST00000571190 GLIS2Q9BZE0 524 aaPredicted RBP22.77■■□□□ 1.24
CIITA-206ENST00000571190 TLL2Q9Y6L7 1015 aa22.77■■□□□ 1.24
CIITA-206ENST00000571190 LAMB2P55268 1798 aa22.76■■□□□ 1.23
CIITA-206ENST00000571190 LBX1P52954 281 aa22.76■■□□□ 1.23
CIITA-206ENST00000571190 WASHC4Q2M389 1173 aa22.76■■□□□ 1.23
CIITA-206ENST00000571190 CYP4F22Q6NT55 531 aa22.76■■□□□ 1.23
CIITA-206ENST00000571190 ZBTB38Q8NAP3 1195 aaPredicted RBP22.76■■□□□ 1.23
CIITA-206ENST00000571190 CAPNS2Q96L46 248 aa22.76■■□□□ 1.23
CIITA-206ENST00000571190 CNOT7Q9UIV1 285 aaKnown RBP22.76■■□□□ 1.23
CIITA-206ENST00000571190 ZBTB12Q9Y330 459 aaPredicted RBP22.76■■□□□ 1.23
CIITA-206ENST00000571190 HSPA8P11142 646 aaKnown RBP22.75■■□□□ 1.23
CIITA-206ENST00000571190 RPS8P62241 208 aaKnown RBP22.75■■□□□ 1.23
CIITA-206ENST00000571190 ZC3H15Q8WU90 426 aaKnown RBP22.75■■□□□ 1.23
CIITA-206ENST00000571190 DBNDD1Q9H9R9 158 aa22.75■■□□□ 1.23
CIITA-206ENST00000571190 PSMD14O00487 310 aa22.74■■□□□ 1.23
CIITA-206ENST00000571190 RIMBP2O15034 1052 aa22.74■■□□□ 1.23
CIITA-206ENST00000571190 MAP2K1Q02750 393 aaPredicted RBP22.74■■□□□ 1.23
CIITA-206ENST00000571190 GOLGA2Q08379 1002 aa22.74■■□□□ 1.23
CIITA-206ENST00000571190 GPR101Q96P66 508 aaPredicted RBP22.74■■□□□ 1.23
CIITA-206ENST00000571190 MYD88Q99836 296 aa22.74■■□□□ 1.23
CIITA-206ENST00000571190 SEC31BQ9NQW1 1179 aa22.74■■□□□ 1.23
CIITA-206ENST00000571190 KCNQ5Q9NR82 932 aa22.74■■□□□ 1.23
CIITA-206ENST00000571190 C6orf229H3BNL8 230 aa22.73■■□□□ 1.23
CIITA-206ENST00000571190 CALD1Q05682 793 aaKnown RBP22.73■■□□□ 1.23
CIITA-206ENST00000571190 CCDC184Q52MB2 194 aa22.73■■□□□ 1.23
CIITA-206ENST00000571190 MICALL2Q8IY33 904 aa22.73■■□□□ 1.23
CIITA-206ENST00000571190 TSPYL6Q8N831 410 aa22.73■■□□□ 1.23
CIITA-206ENST00000571190 DPF2Q92785 391 aa22.73■■□□□ 1.23
CIITA-206ENST00000571190 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
CIITA-206ENST00000571190 CELF2O95319 508 aaKnown RBP22.72■■□□□ 1.23
CIITA-206ENST00000571190 SAPCD2Q86UD0 394 aa22.72■■□□□ 1.23
CIITA-206ENST00000571190 TBC1D16Q8TBP0 767 aa22.72■■□□□ 1.23
CIITA-206ENST00000571190 JARID2Q92833 1246 aaPredicted RBP22.72■■□□□ 1.23
CIITA-206ENST00000571190 LRRC37AA6NMS7 1700 aa22.71■■□□□ 1.23
CIITA-206ENST00000571190 EGFRP00533 1210 aa22.71■■□□□ 1.23
CIITA-206ENST00000571190 PCCAP05165 728 aaPredicted RBP22.71■■□□□ 1.23
CIITA-206ENST00000571190 ECE1P42892 770 aa22.71■■□□□ 1.23
CIITA-206ENST00000571190 DOK7Q18PE1 504 aa22.71■■□□□ 1.23
CIITA-206ENST00000571190 PAXIP1Q6ZW49 1069 aaPredicted RBP22.71■■□□□ 1.23
CIITA-206ENST00000571190 CCDC191Q8NCU4 936 aa22.71■■□□□ 1.23
CIITA-206ENST00000571190 RTL9Q8NET4 1388 aa22.71■■□□□ 1.23
CIITA-206ENST00000571190 H7C1D1 291 aa22.7■■□□□ 1.22
CIITA-206ENST00000571190 ECE2O60344 883 aa22.7■■□□□ 1.22
CIITA-206ENST00000571190 GRM1Q13255 1194 aa22.7■■□□□ 1.22
CIITA-206ENST00000571190 DLK2Q6UY11 383 aa22.7■■□□□ 1.22
CIITA-206ENST00000571190 SAMD7Q7Z3H4 446 aa22.7■■□□□ 1.22
CIITA-206ENST00000571190 METTL22Q9BUU2 404 aaPredicted RBP22.7■■□□□ 1.22
CIITA-206ENST00000571190 PODXL2Q9NZ53 605 aa22.7■■□□□ 1.22
CIITA-206ENST00000571190 AOC2O75106 756 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms