RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 FAM89AQ96GI7 184 aa11.22□□□□□ -0.61
CTDNEP1-203ENST00000570385 ZNRF3Q9ULT6 936 aa11.22□□□□□ -0.61
CTDNEP1-203ENST00000570385 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 GRAPQ13588 217 aa11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 ANKRD13DQ6ZTN6 518 aa11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 SUPT20HQ8NEM7 779 aa11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 PLBD2Q8NHP8 589 aa11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 MBIPQ9NS73 344 aa11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 GPRC5DQ9NZD1 345 aa11.21□□□□□ -0.61
CTDNEP1-203ENST00000570385 LAMB2P55268 1798 aa11.21□□□□□ -0.62
CTDNEP1-203ENST00000570385 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 APAF1O14727 1248 aa11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 LBX1P52954 281 aa11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 USP50Q70EL3 339 aaPredicted RBP11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 RTFDC1Q9BY42 306 aaPredicted RBP11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 ANKRD36CQ5JPF3 1778 aa11.2□□□□□ -0.62
CTDNEP1-203ENST00000570385 WDR33Q9C0J8 1336 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 CTCFP49711 727 aaPredicted RBP11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 KIAA2012Q0VF49 1180 aa11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 CST9Q5W186 159 aa11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 JARID2Q92833 1246 aaPredicted RBP11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 ISCA1Q9BUE6 129 aa11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 ADARB2Q9NS39 739 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 WBP1LQ9NX94 342 aa11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 NSFL1CQ9UNZ2 370 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-203ENST00000570385 YDJCA8MPS7 323 aa11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 RIC3Q7Z5B4 369 aa11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 TRPM4Q8TD43 1214 aa11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 CAPNS2Q96L46 248 aa11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 VPS33BQ9H267 617 aa11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 PHAXQ9H814 394 aaKnown RBP11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 PRKRIP1Q9H875 184 aaPredicted RBP11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 DBNDD1Q9H9R9 158 aa11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
CTDNEP1-203ENST00000570385 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 IRS4O14654 1257 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 CELF2O95319 508 aaKnown RBP11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 HOXB7P09629 217 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 HIRAP54198 1017 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 GPSM2P81274 684 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 DLK2Q6UY11 383 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 ZNF408Q9H9D4 720 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 KCNQ5Q9NR82 932 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 CNOT7Q9UIV1 285 aaKnown RBP11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 COL4A1P02462 1669 aa11.17□□□□□ -0.62
CTDNEP1-203ENST00000570385 DDX60Q8IY21 1712 aaKnown RBP11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 AOC2O75106 756 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 ZNF853P0CG23 659 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 HSPA8P11142 646 aaKnown RBP11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 TNIP1Q15025 636 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 SF3B3Q15393 1217 aaKnown RBP11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 C8orf58Q8NAV2 365 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 MYD88Q99836 296 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 SEC31BQ9NQW1 1179 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 POLLQ9UGP5 575 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 TSKSQ9UJT2 592 aa11.16□□□□□ -0.62
CTDNEP1-203ENST00000570385 PSMD14O00487 310 aa11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 MAP2K1Q02750 393 aaPredicted RBP11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 MICALL2Q8IY33 904 aa11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 IFT57Q9NWB7 429 aa11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 DUOX1Q9NRD9 1551 aa11.15□□□□□ -0.62
CTDNEP1-203ENST00000570385 H7C1D1 291 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 EGFRP00533 1210 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 ECE1P42892 770 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 RPS8P62241 208 aaKnown RBP11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 GNAI1P63096 354 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 TBC1D10BQ4KMP7 808 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 TMC4Q7Z404 712 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 USP48Q86UV5 1035 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 TRPM7Q96QT4 1865 aa11.14□□□□□ -0.63
CTDNEP1-203ENST00000570385 ECE2O60344 883 aa11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 TRIM28Q13263 835 aaKnown RBP11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 SAPCD2Q86UD0 394 aa11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 TSPYL6Q8N831 410 aa11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 ZBTB38Q8NAP3 1195 aaPredicted RBP11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 TBC1D16Q8TBP0 767 aa11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 PGAP2Q9UHJ9 254 aa11.13□□□□□ -0.63
CTDNEP1-203ENST00000570385 UFL1O94874 794 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms