RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
HERPUD1-218ENST00000569569 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-218ENST00000569569 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
HERPUD1-218ENST00000569569 JARID2Q92833 1246 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-218ENST00000569569 PSMD1Q99460 953 aa17.59■□□□□ 0.41
HERPUD1-218ENST00000569569 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
HERPUD1-218ENST00000569569 SNED1Q8TER0 1413 aa17.58■□□□□ 0.41
HERPUD1-218ENST00000569569 F6X3S4 739 aa17.58■□□□□ 0.4
HERPUD1-218ENST00000569569 H7C1W4 665 aa17.58■□□□□ 0.4
HERPUD1-218ENST00000569569 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERPUD1-218ENST00000569569 GCKRQ14397 625 aa17.58■□□□□ 0.4
HERPUD1-218ENST00000569569 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
HERPUD1-218ENST00000569569 SP8Q8IXZ3 490 aa17.58■□□□□ 0.4
HERPUD1-218ENST00000569569 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
HERPUD1-218ENST00000569569 SSH1Q8WYL5 1049 aa17.57■□□□□ 0.4
HERPUD1-218ENST00000569569 KDM2BQ8NHM5 1336 aa17.56■□□□□ 0.4
HERPUD1-218ENST00000569569 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
HERPUD1-218ENST00000569569 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
HERPUD1-218ENST00000569569 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-218ENST00000569569 GLTPD2A6NH11 291 aa17.55■□□□□ 0.4
HERPUD1-218ENST00000569569 IARSP41252 1262 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-218ENST00000569569 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
HERPUD1-218ENST00000569569 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
HERPUD1-218ENST00000569569 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-218ENST00000569569 PTPRCP08575 1304 aa17.54■□□□□ 0.4
HERPUD1-218ENST00000569569 RPS8P62241 208 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-218ENST00000569569 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
HERPUD1-218ENST00000569569 LRRC37AA6NMS7 1700 aa17.54■□□□□ 0.4
HERPUD1-218ENST00000569569 CASP7P55210 303 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 CTSWP56202 376 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 MPNDQ8N594 471 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 PLA2G12BQ9BX93 195 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
HERPUD1-218ENST00000569569 KIF3CO14782 793 aa17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 ALDH1L1O75891 902 aa17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 DPP8Q6V1X1 898 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 NMRK2Q9NPI5 230 aa17.52■□□□□ 0.4
HERPUD1-218ENST00000569569 COL4A1P02462 1669 aa17.52■□□□□ 0.39
HERPUD1-218ENST00000569569 JDP2Q8WYK2 163 aa17.51■□□□□ 0.39
HERPUD1-218ENST00000569569 RRAGCQ9HB90 399 aa17.51■□□□□ 0.39
HERPUD1-218ENST00000569569 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
HERPUD1-218ENST00000569569 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-218ENST00000569569 C1QTNF8P60827 252 aa17.5■□□□□ 0.39
HERPUD1-218ENST00000569569 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
HERPUD1-218ENST00000569569 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
HERPUD1-218ENST00000569569 C9orf78Q9NZ63 289 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-218ENST00000569569 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
HERPUD1-218ENST00000569569 FZD9O00144 591 aa17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 GRM8O00222 908 aa17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 CSF1RP07333 972 aa17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 RARSP54136 660 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 ANKRD18AQ8IVF6 992 aa17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 CDC5LQ99459 802 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 GREM2Q9H772 168 aa17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
HERPUD1-218ENST00000569569 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
HERPUD1-218ENST00000569569 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
HERPUD1-218ENST00000569569 SCN4AP35499 1836 aa17.47■□□□□ 0.39
HERPUD1-218ENST00000569569 DDNO94850 711 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-218ENST00000569569 VEGFAP15692 232 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-218ENST00000569569 AOC3Q16853 763 aa17.47■□□□□ 0.39
HERPUD1-218ENST00000569569 NOB1Q9ULX3 412 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-218ENST00000569569 LTBP1Q14766 1721 aa17.47■□□□□ 0.39
HERPUD1-218ENST00000569569 COL4A5P29400 1685 aa17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 TOMM70O94826 608 aa17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 GPSM2P81274 684 aa17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 FOXO4P98177 505 aa17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 C16orf71Q8IYS4 520 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 BSDC1Q9NW68 430 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.39
HERPUD1-218ENST00000569569 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
HERPUD1-218ENST00000569569 POTECB2RU33 542 aa17.45■□□□□ 0.38
HERPUD1-218ENST00000569569 ITGA6P23229 1130 aa17.45■□□□□ 0.38
HERPUD1-218ENST00000569569 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
HERPUD1-218ENST00000569569 POLLQ9UGP5 575 aa17.45■□□□□ 0.38
HERPUD1-218ENST00000569569 UTYO14607 1347 aa17.45■□□□□ 0.38
HERPUD1-218ENST00000569569 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
HERPUD1-218ENST00000569569 C6orf229H3BNL8 230 aa17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 KCNA4P22459 653 aa17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 FAM161AQ3B820 660 aa17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 EYA3Q99504 573 aa17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 API5Q9BZZ5 524 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-218ENST00000569569 ANKRD18BA2A2Z9 1011 aa17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 NBPF7P0C2Y1 421 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms