RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 YBX3P16989 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDH13-214ENST00000569455 GPTP24298 496 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 POLD1P28340 1107 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 BMP2KLQ5H9B9 411 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 EPHA10Q5JZY3 1008 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 DNAJC5GQ8N7S2 189 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 NLGN2Q8NFZ4 835 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 RHPN1Q8TCX5 695 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
CDH13-214ENST00000569455 PLA2G12BQ9BX93 195 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 COPRSQ9NQ92 184 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 CHMP3Q9Y3E7 222 aa9.41□□□□□ -0.9
CDH13-214ENST00000569455 MSH5O43196 834 aa9.4□□□□□ -0.9
CDH13-214ENST00000569455 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
CDH13-214ENST00000569455 PHF14O94880 888 aa9.4□□□□□ -0.9
CDH13-214ENST00000569455 FOXO4P98177 505 aa9.4□□□□□ -0.9
CDH13-214ENST00000569455 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
CDH13-214ENST00000569455 LMBR1LQ6UX01 489 aa9.4□□□□□ -0.9
CDH13-214ENST00000569455 CLASRPQ8N2M8 674 aaKnown RBP9.4□□□□□ -0.9
CDH13-214ENST00000569455 ZNF526Q8TF50 670 aaPredicted RBP9.4□□□□□ -0.9
CDH13-214ENST00000569455 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
CDH13-214ENST00000569455 PCDH10Q9P2E7 1040 aa9.4□□□□□ -0.9
CDH13-214ENST00000569455 TRMT112Q9UI30 125 aaKnown RBP9.4□□□□□ -0.9
CDH13-214ENST00000569455 RBM19Q9Y4C8 960 aaKnown RBP9.4□□□□□ -0.9
CDH13-214ENST00000569455 LAMB2P55268 1798 aa9.4□□□□□ -0.91
CDH13-214ENST00000569455 WDR90Q96KV7 1748 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 AOX1Q06278 1338 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 SH3TC1Q8TE82 1336 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 EIF5BO60841 1220 aaKnown RBP9.39□□□□□ -0.91
CDH13-214ENST00000569455 GYS1P13807 737 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 AMIGO3Q86WK7 504 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 FAM89AQ96GI7 184 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 UTP14AQ9BVJ6 771 aaKnown RBP9.39□□□□□ -0.91
CDH13-214ENST00000569455 OSBPL3Q9H4L5 887 aa9.39□□□□□ -0.91
CDH13-214ENST00000569455 NIP7Q9Y221 180 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDH13-214ENST00000569455 UBN2Q6ZU65 1347 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 IRS4O14654 1257 aaPredicted RBP9.38□□□□□ -0.91
CDH13-214ENST00000569455 PDE8AO60658 829 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 MX1P20591 662 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 RFX5P48382 616 aaPredicted RBP9.38□□□□□ -0.91
CDH13-214ENST00000569455 PDE1AP54750 535 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 CCDC57Q2TAC2 916 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
CDH13-214ENST00000569455 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 IL1RAPL2Q9NP60 686 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 PA2G4Q9UQ80 394 aaKnown RBP9.38□□□□□ -0.91
CDH13-214ENST00000569455 AK9Q5TCS8 1911 aa9.38□□□□□ -0.91
CDH13-214ENST00000569455 KIF3CO14782 793 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 CSF1RP07333 972 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 IFIT2P09913 472 aaKnown RBP9.37□□□□□ -0.91
CDH13-214ENST00000569455 TM4SF1P30408 202 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
CDH13-214ENST00000569455 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
CDH13-214ENST00000569455 TAF7LQ5H9L4 462 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 USPL1Q5W0Q7 1092 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 OTUD7AQ8TE49 926 aaPredicted RBP9.37□□□□□ -0.91
CDH13-214ENST00000569455 NYXQ9GZU5 481 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 SIL1Q9H173 461 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
CDH13-214ENST00000569455 STAP2Q9UGK3 403 aa9.37□□□□□ -0.91
CDH13-214ENST00000569455 DDX60Q8IY21 1712 aaKnown RBP9.36□□□□□ -0.91
CDH13-214ENST00000569455 TTC41PQ6P2S7 1318 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 SALL3Q9BXA9 1300 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 ANKRD18BA2A2Z9 1011 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 EYA2O00167 538 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 ERC2O15083 957 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 CDC45O75419 566 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 CIAO1O76071 339 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 IL15P40933 162 aaPredicted RBP9.36□□□□□ -0.91
CDH13-214ENST00000569455 CTSWP56202 376 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 CASC1Q6TDU7 716 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 JMYQ8N9B5 988 aa9.36□□□□□ -0.91
CDH13-214ENST00000569455 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 SASH1O94885 1247 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 NTSR2O95665 410 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 MMP10P09238 476 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 GTF2E1P29083 439 aaPredicted RBP9.35□□□□□ -0.91
CDH13-214ENST00000569455 AACSQ86V21 672 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 TTLL11Q8NHH1 800 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 KLHDC4Q8TBB5 520 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 KLRG1Q96E93 195 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 SETDB2Q96T68 719 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 KIF13BQ9NQT8 1826 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 CARMIL3Q8ND23 1372 aa9.35□□□□□ -0.91
CDH13-214ENST00000569455 NRXN2Q9P2S2 1712 aa9.34□□□□□ -0.91
CDH13-214ENST00000569455 GLRX3O76003 335 aaKnown RBP9.34□□□□□ -0.91
CDH13-214ENST00000569455 GSPT1P15170 499 aaKnown RBP9.34□□□□□ -0.91
CDH13-214ENST00000569455 ANP32AP39687 249 aaKnown RBP9.34□□□□□ -0.91
CDH13-214ENST00000569455 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
CDH13-214ENST00000569455 TBC1D9BQ66K14 1250 aa9.34□□□□□ -0.91
CDH13-214ENST00000569455 BICDL1Q6ZP65 573 aa9.34□□□□□ -0.91
CDH13-214ENST00000569455 BCL2L12Q9HB09 334 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms