RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 GTF2E1P29083 439 aaPredicted RBP14.73□□□□□ -0.05
CHRFAM7A-206ENST00000569278 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 TCERG1O14776 1098 aaKnown RBP14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 AOC3Q16853 763 aa14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 DEFB115Q30KQ5 88 aa14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 JDP2Q8WYK2 163 aa14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 RTFDC1Q9BY42 306 aaPredicted RBP14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 ATP6V0A2Q9Y487 856 aa14.72□□□□□ -0.05
CHRFAM7A-206ENST00000569278 EIF6P56537 245 aaKnown RBP14.71□□□□□ -0.05
CHRFAM7A-206ENST00000569278 KRT24Q2M2I5 525 aa14.71□□□□□ -0.05
CHRFAM7A-206ENST00000569278 SLC10A5Q5PT55 438 aa14.71□□□□□ -0.05
CHRFAM7A-206ENST00000569278 RBM17Q96I25 401 aaKnown RBP14.71□□□□□ -0.05
CHRFAM7A-206ENST00000569278 SHTN1A0MZ66 631 aa14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 PPIP5K2O43314 1243 aa14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 ANP32CO43423 234 aa14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 CXCL9Q07325 125 aa14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 DDX10Q13206 875 aaKnown RBP14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 GPRC5DQ9NZD1 345 aa14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 ABT1Q9ULW3 272 aaKnown RBP14.7□□□□□ -0.06
CHRFAM7A-206ENST00000569278 YDJCA8MPS7 323 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 PARP10Q53GL7 1025 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 CYP4F22Q6NT55 531 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 USP50Q70EL3 339 aaPredicted RBP14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 NLRP10Q86W26 655 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 NIM1KQ8IY84 436 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 CAPNS2Q96L46 248 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 TLL2Q9Y6L7 1015 aa14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 TNRC18O15417 2968 aaPredicted RBP14.69□□□□□ -0.06
CHRFAM7A-206ENST00000569278 LMOD1P29536 600 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-206ENST00000569278 GMPSP49915 693 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-206ENST00000569278 HIRAP54198 1017 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-206ENST00000569278 GRIPAP1Q4V328 841 aa14.68□□□□□ -0.06
CHRFAM7A-206ENST00000569278 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
CHRFAM7A-206ENST00000569278 UTP14AQ9BVJ6 771 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-206ENST00000569278 SCN9AQ15858 1988 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 AOC2O75106 756 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 HCLS1P14317 486 aaPredicted RBP14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 EIF2S2P20042 333 aaKnown RBP14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 KIAA2012Q0VF49 1180 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 PPP1R42Q7Z4L9 355 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 TRPM4Q8TD43 1214 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 ZNF428Q96B54 188 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 ABHD8Q96I13 439 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 ADARB2Q9NS39 739 aaKnown RBP14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 PGAP2Q9UHJ9 254 aa14.67□□□□□ -0.06
CHRFAM7A-206ENST00000569278 MAPK8IP3Q9UPT6 1336 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 NUBP1P53384 320 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 DLK2Q6UY11 383 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 NECTIN2Q92692 538 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 NLRP3Q96P20 1036 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 GLIS2Q9BZE0 524 aaPredicted RBP14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 ZNRF3Q9ULT6 936 aa14.66□□□□□ -0.06
CHRFAM7A-206ENST00000569278 TMPOP42166 694 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-206ENST00000569278 RIPK4P57078 832 aa14.65□□□□□ -0.06
CHRFAM7A-206ENST00000569278 MAP2K1Q02750 393 aaPredicted RBP14.65□□□□□ -0.06
CHRFAM7A-206ENST00000569278 SAPCD2Q86UD0 394 aa14.65□□□□□ -0.06
CHRFAM7A-206ENST00000569278 RAD17O75943 681 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 EGFRP00533 1210 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 TCIRG1Q13488 830 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 GRAPQ13588 217 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 SP8Q8IXZ3 490 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 GRAPLQ8TC17 118 aaPredicted RBP14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 GPR101Q96P66 508 aaPredicted RBP14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 VPS33BQ9H267 617 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 TRIM35Q9UPQ4 493 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 ZNF646O15015 1829 aaPredicted RBP14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CDHR2Q9BYE9 1310 aa14.64□□□□□ -0.07
CHRFAM7A-206ENST00000569278 RTL9Q8NET4 1388 aa14.63□□□□□ -0.07
CHRFAM7A-206ENST00000569278 DPP8Q6V1X1 898 aaPredicted RBP14.63□□□□□ -0.07
CHRFAM7A-206ENST00000569278 ZIC5Q96T25 663 aa14.63□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CHPF2Q9P2E5 772 aa14.63□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CHL1O00533 1208 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 BBOX1O75936 387 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CELF2O95319 508 aaKnown RBP14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 NEFMP07197 916 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 AIMP1Q12904 312 aaKnown RBP14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 GRM1Q13255 1194 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CIAPIN1Q6FI81 312 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CELF1Q92879 486 aaKnown RBP14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 SH3TC1Q8TE82 1336 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CASP8AP2Q9UKL3 1982 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 PSME4Q14997 1843 aa14.62□□□□□ -0.07
CHRFAM7A-206ENST00000569278 HAX1O00165 279 aa14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 ECE1P42892 770 aa14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 FAM161AQ3B820 660 aa14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 MPNDQ8N594 471 aa14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 ISCA1Q9BUE6 129 aa14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 TRMT112Q9UI30 125 aaKnown RBP14.61□□□□□ -0.07
CHRFAM7A-206ENST00000569278 POLR2AP24928 1970 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-206ENST00000569278 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms