RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PCCAP05165 728 aaPredicted RBP10.08□□□□□ -0.8
CDH3-209ENST00000569080 RTL5Q5HYW3 569 aaPredicted RBP10.08□□□□□ -0.8
CDH3-209ENST00000569080 SP8Q8IXZ3 490 aa10.08□□□□□ -0.8
CDH3-209ENST00000569080 DNAJC5GQ8N7S2 189 aa10.08□□□□□ -0.8
CDH3-209ENST00000569080 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
CDH3-209ENST00000569080 CELF1Q92879 486 aaKnown RBP10.08□□□□□ -0.8
CDH3-209ENST00000569080 TAF1DQ9H5J8 278 aaPredicted RBP10.08□□□□□ -0.8
CDH3-209ENST00000569080 MAP3K2Q9Y2U5 619 aa10.08□□□□□ -0.8
CDH3-209ENST00000569080 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 PI4KAP2A4QPH2 592 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 VAMP4O75379 141 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
CDH3-209ENST00000569080 HTRA3P83110 453 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 AOC3Q16853 763 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 KSR2Q6VAB6 950 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 DDX46Q7L014 1031 aaKnown RBP10.07□□□□□ -0.8
CDH3-209ENST00000569080 FAM9BQ8IZU0 186 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 GPC2Q8N158 579 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 PI4KAP1Q8N8J0 262 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 CHMP4AQ9BY43 222 aa10.07□□□□□ -0.8
CDH3-209ENST00000569080 CWC25Q9NXE8 425 aaPredicted RBP10.07□□□□□ -0.8
CDH3-209ENST00000569080 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
CDH3-209ENST00000569080 IQCA1LA6NCM1 817 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 NEURL1BA8MQ27 555 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 PPIP5K2O43314 1243 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 SCNN1DP51172 638 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 EXOSC9Q06265 439 aaKnown RBP10.06□□□□□ -0.8
CDH3-209ENST00000569080 KIAA2012Q0VF49 1180 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 FLIIQ13045 1269 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 TMC4Q7Z404 712 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 LARGE2Q8N3Y3 721 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 JDP2Q8WYK2 163 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 STK31Q9BXU1 1019 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 VPS33BQ9H267 617 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 SCN9AQ15858 1988 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 A0A1B0GUL6 1792 aa10.06□□□□□ -0.8
CDH3-209ENST00000569080 ZNF646O15015 1829 aaPredicted RBP10.05□□□□□ -0.8
CDH3-209ENST00000569080 PSME4Q14997 1843 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 RTL9Q8NET4 1388 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 CWF19L2Q2TBE0 894 aaKnown RBP10.05□□□□□ -0.8
CDH3-209ENST00000569080 CHADLQ6NUI6 762 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 DPP8Q6V1X1 898 aaPredicted RBP10.05□□□□□ -0.8
CDH3-209ENST00000569080 LDHDQ86WU2 507 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 MPNDQ8N594 471 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 JARID2Q92833 1246 aaPredicted RBP10.05□□□□□ -0.8
CDH3-209ENST00000569080 SEC31BQ9NQW1 1179 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 PASKQ96RG2 1323 aa10.05□□□□□ -0.8
CDH3-209ENST00000569080 YDJCA8MPS7 323 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 PDE8AO60658 829 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 EPHX2P34913 555 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 CASP7P55210 303 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 CTSWP56202 376 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 NIM1KQ8IY84 436 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 SUPT20HQ8NEM7 779 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 HACL1Q9UJ83 578 aa10.04□□□□□ -0.8
CDH3-209ENST00000569080 EIF6P56537 245 aaKnown RBP10.03□□□□□ -0.8
CDH3-209ENST00000569080 GPSM2P81274 684 aa10.03□□□□□ -0.8
CDH3-209ENST00000569080 CXCL9Q07325 125 aa10.03□□□□□ -0.8
CDH3-209ENST00000569080 KLRG1Q96E93 195 aa10.03□□□□□ -0.8
CDH3-209ENST00000569080 MYH16Q9H6N6 1097 aa10.03□□□□□ -0.8
CDH3-209ENST00000569080 POLLQ9UGP5 575 aa10.03□□□□□ -0.8
CDH3-209ENST00000569080 ZNRF3Q9ULT6 936 aa10.03□□□□□ -0.8
CDH3-209ENST00000569080 H7C1W4 665 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
CDH3-209ENST00000569080 RPS8P62241 208 aaKnown RBP10.02□□□□□ -0.81
CDH3-209ENST00000569080 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 FKBP5Q13451 457 aaPredicted RBP10.02□□□□□ -0.81
CDH3-209ENST00000569080 GCKRQ14397 625 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 CCDC152Q4G0S7 254 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 JMYQ8N9B5 988 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 TBC1D16Q8TBP0 767 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 DNAAF4Q8WXU2 420 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.81
CDH3-209ENST00000569080 PLA2G12BQ9BX93 195 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.81
CDH3-209ENST00000569080 PODXL2Q9NZ53 605 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 GJA3Q9Y6H8 435 aa10.02□□□□□ -0.81
CDH3-209ENST00000569080 ZNF609O15014 1411 aa10.01□□□□□ -0.81
CDH3-209ENST00000569080 HSP90B1P14625 803 aaKnown RBP10.01□□□□□ -0.81
CDH3-209ENST00000569080 EPS15P42566 896 aa10.01□□□□□ -0.81
CDH3-209ENST00000569080 UBE3BQ7Z3V4 1068 aa10.01□□□□□ -0.81
CDH3-209ENST00000569080 LINS1Q8NG48 757 aa10.01□□□□□ -0.81
CDH3-209ENST00000569080 GPR101Q96P66 508 aaPredicted RBP10.01□□□□□ -0.81
CDH3-209ENST00000569080 GREM2Q9H772 168 aa10.01□□□□□ -0.81
CDH3-209ENST00000569080 GPRC5DQ9NZD1 345 aa10.01□□□□□ -0.81
CDH3-209ENST00000569080 NSFL1CQ9UNZ2 370 aaKnown RBP10.01□□□□□ -0.81
CDH3-209ENST00000569080 THSD7BQ9C0I4 1608 aa10□□□□□ -0.81
CDH3-209ENST00000569080 F6X3S4 739 aa10□□□□□ -0.81
CDH3-209ENST00000569080 RAD17O75943 681 aa10□□□□□ -0.81
CDH3-209ENST00000569080 GMPSP49915 693 aaPredicted RBP10□□□□□ -0.81
CDH3-209ENST00000569080 EAPPQ56P03 285 aaPredicted RBP10□□□□□ -0.81
CDH3-209ENST00000569080 BEND3Q5T5X7 828 aa10□□□□□ -0.81
CDH3-209ENST00000569080 CIAPIN1Q6FI81 312 aa10□□□□□ -0.81
CDH3-209ENST00000569080 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
CDH3-209ENST00000569080 CREBZFQ9NS37 354 aa10□□□□□ -0.81
CDH3-209ENST00000569080 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
CDH3-209ENST00000569080 CCER2I3L3R5 266 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms