RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 GRAPLQ8TC17 118 aaPredicted RBP10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 PLA2G12BQ9BX93 195 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 COL4A1P02462 1669 aa10.49□□□□□ -0.73
HDGFL3-205ENST00000568129 TCERG1O14776 1098 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 PPEF1O14829 653 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 PDE8AO60658 829 aa10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 DDX46Q7L014 1031 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 LINS1Q8NG48 757 aa10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 DNAAF4Q8WXU2 420 aa10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 RTL9Q8NET4 1388 aa10.48□□□□□ -0.73
HDGFL3-205ENST00000568129 COL4A5P29400 1685 aa10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 TOMM70O94826 608 aa10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 CT47B1P0C2W7 299 aaPredicted RBP10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 IARSP41252 1262 aaKnown RBP10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 NEXNQ0ZGT2 675 aa10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 GCKRQ14397 625 aa10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 BEND3Q5T5X7 828 aa10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 L3MBTL3Q96JM7 780 aaPredicted RBP10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 NMRK2Q9NPI5 230 aa10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 DUOX1Q9NRD9 1551 aa10.47□□□□□ -0.73
HDGFL3-205ENST00000568129 CSF1RP07333 972 aa10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 RPS8P62241 208 aaKnown RBP10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 CWF19L2Q2TBE0 894 aaKnown RBP10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 ALDH1L2Q3SY69 923 aa10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 DPY19L2Q6NUT2 758 aa10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 MRPL50Q8N5N7 158 aaKnown RBP10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 TTLL11Q8NHH1 800 aa10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 ZNF277Q9NRM2 450 aaPredicted RBP10.46□□□□□ -0.73
HDGFL3-205ENST00000568129 PSME4Q14997 1843 aa10.46□□□□□ -0.74
HDGFL3-205ENST00000568129 VEGFAP15692 232 aaPredicted RBP10.45□□□□□ -0.74
HDGFL3-205ENST00000568129 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
HDGFL3-205ENST00000568129 RBM46Q8TBY0 533 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-205ENST00000568129 ZNF526Q8TF50 670 aaPredicted RBP10.45□□□□□ -0.74
HDGFL3-205ENST00000568129 CELF1Q92879 486 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-205ENST00000568129 RRAGCQ9HB90 399 aa10.45□□□□□ -0.74
HDGFL3-205ENST00000568129 PODXL2Q9NZ53 605 aa10.45□□□□□ -0.74
HDGFL3-205ENST00000568129 SPEF2Q9C093 1822 aa10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 ALDH1L1O75891 902 aa10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 CCDC152Q4G0S7 254 aa10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 RTL5Q5HYW3 569 aaPredicted RBP10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 MPNDQ8N594 471 aa10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 SUPT20HQ8NEM7 779 aa10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 SSH1Q8WYL5 1049 aa10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 ADAMTSL1Q8N6G6 1762 aa10.44□□□□□ -0.74
HDGFL3-205ENST00000568129 UTYO14607 1347 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 PTPRCP08575 1304 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 F6X3S4 739 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 CTSWP56202 376 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 KIAA2012Q0VF49 1180 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 FSTL1Q12841 308 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 A0A1B0GUL6 1792 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 SCN9AQ15858 1988 aa10.43□□□□□ -0.74
HDGFL3-205ENST00000568129 ZNF541Q9H0D2 1346 aa10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 DDNO94850 711 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 FOXO4P98177 505 aa10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 DPP8Q6V1X1 898 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 UBE3BQ7Z3V4 1068 aa10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 GPC2Q8N158 579 aa10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 JDP2Q8WYK2 163 aa10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 JARID2Q92833 1246 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 TMX4Q9H1E5 349 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-205ENST00000568129 LARGE2Q8N3Y3 721 aa10.41□□□□□ -0.74
HDGFL3-205ENST00000568129 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
HDGFL3-205ENST00000568129 POLLQ9UGP5 575 aa10.41□□□□□ -0.74
HDGFL3-205ENST00000568129 ZNF646O15015 1829 aaPredicted RBP10.41□□□□□ -0.74
HDGFL3-205ENST00000568129 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
HDGFL3-205ENST00000568129 GRM8O00222 908 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 HSPA6P17066 643 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 GPSM2P81274 684 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 KAZALD1Q96I82 304 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 CDC5LQ99459 802 aaKnown RBP10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 SRCIN1Q9C0H9 1055 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 GREM2Q9H772 168 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 ZNRF3Q9ULT6 936 aa10.4□□□□□ -0.74
HDGFL3-205ENST00000568129 IQCA1LA6NCM1 817 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 PPIP5K2O43314 1243 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 RARSP54136 660 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 EIF6P56537 245 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 CXCL9Q07325 125 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 AOC3Q16853 763 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 ANKRD18AQ8IVF6 992 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 NIM1KQ8IY84 436 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 ARHGAP45Q92619 1136 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 TAF1DQ9H5J8 278 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 MINPP1Q9UNW1 487 aa10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 NSFL1CQ9UNZ2 370 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-205ENST00000568129 YDJCA8MPS7 323 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 ITGA6P23229 1130 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 SCNN1DP51172 638 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 EPHA10Q5JZY3 1008 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 C16orf71Q8IYS4 520 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 833 ms