RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LRRCC1Q9C099 1032 aa18.03■□□□□ 0.48
COMMD4-221ENST00000567935 PNMA6EA0A0J9YXQ4 647 aa18.02■□□□□ 0.48
COMMD4-221ENST00000567935 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.48
COMMD4-221ENST00000567935 PPP1R42Q7Z4L9 355 aa18.02■□□□□ 0.48
COMMD4-221ENST00000567935 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
COMMD4-221ENST00000567935 OSBPL3Q9H4L5 887 aa18.02■□□□□ 0.48
COMMD4-221ENST00000567935 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
COMMD4-221ENST00000567935 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-221ENST00000567935 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
COMMD4-221ENST00000567935 GCKRQ14397 625 aa18.01■□□□□ 0.47
COMMD4-221ENST00000567935 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
COMMD4-221ENST00000567935 CNTNAP4Q9C0A0 1308 aa18■□□□□ 0.47
COMMD4-221ENST00000567935 NBPF26B4DH59 902 aa18■□□□□ 0.47
COMMD4-221ENST00000567935 NFKBIEO00221 500 aa18■□□□□ 0.47
COMMD4-221ENST00000567935 SRGAP3O43295 1099 aa18■□□□□ 0.47
COMMD4-221ENST00000567935 IGKV5-2P06315 115 aa18■□□□□ 0.47
COMMD4-221ENST00000567935 CWF19L2Q2TBE0 894 aaKnown RBP18■□□□□ 0.47
COMMD4-221ENST00000567935 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
COMMD4-221ENST00000567935 NBPF15Q8N660 670 aa18■□□□□ 0.47
COMMD4-221ENST00000567935 MYD88Q99836 296 aa18■□□□□ 0.47
COMMD4-221ENST00000567935 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
COMMD4-221ENST00000567935 AOX1Q06278 1338 aa17.99■□□□□ 0.47
COMMD4-221ENST00000567935 PASKQ96RG2 1323 aa17.99■□□□□ 0.47
COMMD4-221ENST00000567935 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
COMMD4-221ENST00000567935 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
COMMD4-221ENST00000567935 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
COMMD4-221ENST00000567935 ERC1Q8IUD2 1116 aa17.99■□□□□ 0.47
COMMD4-221ENST00000567935 KIF1BPQ96EK5 621 aa17.99■□□□□ 0.47
COMMD4-221ENST00000567935 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
COMMD4-221ENST00000567935 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
COMMD4-221ENST00000567935 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
COMMD4-221ENST00000567935 MYH14Q7Z406 1995 aaKnown RBP17.98■□□□□ 0.47
COMMD4-221ENST00000567935 ZNF831Q5JPB2 1677 aa17.97■□□□□ 0.47
COMMD4-221ENST00000567935 POLRMTO00411 1230 aaKnown RBP17.97■□□□□ 0.47
COMMD4-221ENST00000567935 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
COMMD4-221ENST00000567935 DPY19L2Q6NUT2 758 aa17.97■□□□□ 0.47
COMMD4-221ENST00000567935 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
COMMD4-221ENST00000567935 CDC45O75419 566 aa17.96■□□□□ 0.47
COMMD4-221ENST00000567935 A1BGP04217 495 aa17.96■□□□□ 0.47
COMMD4-221ENST00000567935 DNAJC10Q8IXB1 793 aa17.95■□□□□ 0.46
COMMD4-221ENST00000567935 CCDC191Q8NCU4 936 aa17.95■□□□□ 0.46
COMMD4-221ENST00000567935 SUCLG2Q96I99 432 aa17.95■□□□□ 0.46
COMMD4-221ENST00000567935 TBC1D32Q96NH3 1257 aa17.95■□□□□ 0.46
COMMD4-221ENST00000567935 STAP2Q9UGK3 403 aa17.95■□□□□ 0.46
COMMD4-221ENST00000567935 SALL3Q9BXA9 1300 aa17.95■□□□□ 0.46
COMMD4-221ENST00000567935 TMEM88BA6NKF7 163 aa17.94■□□□□ 0.46
COMMD4-221ENST00000567935 APBB1O00213 710 aa17.94■□□□□ 0.46
COMMD4-221ENST00000567935 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-221ENST00000567935 PDE1AP54750 535 aa17.94■□□□□ 0.46
COMMD4-221ENST00000567935 TRIM28Q13263 835 aaKnown RBP17.94■□□□□ 0.46
COMMD4-221ENST00000567935 CASC1Q6TDU7 716 aa17.94■□□□□ 0.46
COMMD4-221ENST00000567935 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
COMMD4-221ENST00000567935 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-221ENST00000567935 MX1P20591 662 aa17.93■□□□□ 0.46
COMMD4-221ENST00000567935 TM4SF1P30408 202 aa17.93■□□□□ 0.46
COMMD4-221ENST00000567935 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
COMMD4-221ENST00000567935 RHPN1Q8TCX5 695 aa17.93■□□□□ 0.46
COMMD4-221ENST00000567935 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
COMMD4-221ENST00000567935 TJP1Q07157 1748 aa17.92■□□□□ 0.46
COMMD4-221ENST00000567935 DDNO94850 711 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-221ENST00000567935 SEC24BO95487 1268 aa17.92■□□□□ 0.46
COMMD4-221ENST00000567935 CYP19A1P11511 503 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-221ENST00000567935 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
COMMD4-221ENST00000567935 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-221ENST00000567935 RABL6Q3YEC7 729 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-221ENST00000567935 TTLL7Q6ZT98 887 aa17.92■□□□□ 0.46
COMMD4-221ENST00000567935 KAZALD1Q96I82 304 aa17.92■□□□□ 0.46
COMMD4-221ENST00000567935 BICC1Q9H694 974 aaKnown RBP17.92■□□□□ 0.46
COMMD4-221ENST00000567935 A0A087WZG4 1122 aa17.91■□□□□ 0.46
COMMD4-221ENST00000567935 H7C1W4 665 aa17.91■□□□□ 0.46
COMMD4-221ENST00000567935 TNRC18O15417 2968 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-221ENST00000567935 IL6STP40189 918 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-221ENST00000567935 OS9Q13438 667 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-221ENST00000567935 ERFEQ4G0M1 354 aa17.91■□□□□ 0.46
COMMD4-221ENST00000567935 TTLL6Q8N841 843 aa17.91■□□□□ 0.46
COMMD4-221ENST00000567935 RASSF10A6NK89 507 aa17.9■□□□□ 0.46
COMMD4-221ENST00000567935 ITGBL1O95965 494 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-221ENST00000567935 CRKLP46109 303 aaKnown RBP17.9■□□□□ 0.46
COMMD4-221ENST00000567935 CASP7P55210 303 aa17.9■□□□□ 0.46
COMMD4-221ENST00000567935 MAP2K1Q02750 393 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-221ENST00000567935 TCIRG1Q13488 830 aa17.9■□□□□ 0.46
COMMD4-221ENST00000567935 ERICH6Q7L0X2 663 aa17.9■□□□□ 0.46
COMMD4-221ENST00000567935 LDHDQ86WU2 507 aa17.9■□□□□ 0.46
COMMD4-221ENST00000567935 ISCA1Q9BUE6 129 aa17.9■□□□□ 0.46
COMMD4-221ENST00000567935 MAP3K15Q6ZN16 1313 aa17.9■□□□□ 0.46
COMMD4-221ENST00000567935 G3BP1Q13283 466 aaKnown RBP eCLIP17.89■□□□□ 0.452e-6■□□□□ 9.5
COMMD4-221ENST00000567935 TBC1D9Q6ZT07 1266 aa17.89■□□□□ 0.45
COMMD4-221ENST00000567935 CLASRPQ8N2M8 674 aaKnown RBP17.89■□□□□ 0.45
COMMD4-221ENST00000567935 OTUD7AQ8TE49 926 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-221ENST00000567935 GPATCH3Q96I76 525 aa17.89■□□□□ 0.45
COMMD4-221ENST00000567935 WDR33Q9C0J8 1336 aaKnown RBP17.89■□□□□ 0.45
COMMD4-221ENST00000567935 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
COMMD4-221ENST00000567935 ERVV-1B6SEH8 477 aa17.88■□□□□ 0.45
COMMD4-221ENST00000567935 ATP5J2-PTCD1G3V325 749 aa17.88■□□□□ 0.45
COMMD4-221ENST00000567935 MFAP1P55081 439 aaKnown RBP17.88■□□□□ 0.45
COMMD4-221ENST00000567935 DEFB115Q30KQ5 88 aa17.88■□□□□ 0.45
COMMD4-221ENST00000567935 UBE3BQ7Z3V4 1068 aa17.88■□□□□ 0.45
COMMD4-221ENST00000567935 C22orf23Q9BZE7 217 aa17.88■□□□□ 0.45
COMMD4-221ENST00000567935 ZBTB3Q9H5J0 574 aa17.88■□□□□ 0.45
COMMD4-221ENST00000567935 COPRSQ9NQ92 184 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms