RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 APAF1O14727 1248 aa24.05■■□□□ 1.44
LINC01238-205ENST00000567549 DDX58O95786 925 aaKnown RBP24.05■■□□□ 1.44
LINC01238-205ENST00000567549 ITGBL1O95965 494 aaPredicted RBP24.05■■□□□ 1.44
LINC01238-205ENST00000567549 TRIM28Q13263 835 aaKnown RBP24.05■■□□□ 1.44
LINC01238-205ENST00000567549 RIC3Q7Z5B4 369 aa24.05■■□□□ 1.44
LINC01238-205ENST00000567549 ISCA1Q9BUE6 129 aa24.04■■□□□ 1.44
LINC01238-205ENST00000567549 ZNF853P0CG23 659 aa24.03■■□□□ 1.44
LINC01238-205ENST00000567549 KIAA2012Q0VF49 1180 aa24.03■■□□□ 1.44
LINC01238-205ENST00000567549 AIDAQ96BJ3 306 aa24.03■■□□□ 1.44
LINC01238-205ENST00000567549 ADARB2Q9NS39 739 aaKnown RBP24.03■■□□□ 1.44
LINC01238-205ENST00000567549 SCNN1DP51172 638 aa24.02■■□□□ 1.44
LINC01238-205ENST00000567549 SF3B3Q15393 1217 aaKnown RBP24.02■■□□□ 1.44
LINC01238-205ENST00000567549 CCDC30Q5VVM6 783 aa24.02■■□□□ 1.44
LINC01238-205ENST00000567549 MAP1SQ66K74 1059 aaPredicted RBP24.02■■□□□ 1.44
LINC01238-205ENST00000567549 CIAPIN1Q6FI81 312 aa24.02■■□□□ 1.44
LINC01238-205ENST00000567549 TNS4Q8IZW8 715 aa24.01■■□□□ 1.43
LINC01238-205ENST00000567549 BCL2L13Q9BXK5 485 aa24.01■■□□□ 1.43
LINC01238-205ENST00000567549 GPRC5DQ9NZD1 345 aa24.01■■□□□ 1.43
LINC01238-205ENST00000567549 COL4A5P29400 1685 aa24■■□□□ 1.43
LINC01238-205ENST00000567549 ATP5J2-PTCD1G3V325 749 aa24■■□□□ 1.43
LINC01238-205ENST00000567549 FAM89AQ96GI7 184 aa24■■□□□ 1.43
LINC01238-205ENST00000567549 EYA3Q99504 573 aa24■■□□□ 1.43
LINC01238-205ENST00000567549 DDX60Q8IY21 1712 aaKnown RBP23.99■■□□□ 1.43
LINC01238-205ENST00000567549 IRS4O14654 1257 aaPredicted RBP23.99■■□□□ 1.43
LINC01238-205ENST00000567549 EPS15P42566 896 aa23.99■■□□□ 1.43
LINC01238-205ENST00000567549 DEFB115Q30KQ5 88 aa23.99■■□□□ 1.43
LINC01238-205ENST00000567549 COL13A1Q5TAT6 717 aaPredicted RBP23.99■■□□□ 1.43
LINC01238-205ENST00000567549 ABT1Q9ULW3 272 aaKnown RBP23.99■■□□□ 1.43
LINC01238-205ENST00000567549 LRRC37AA6NMS7 1700 aa23.98■■□□□ 1.43
LINC01238-205ENST00000567549 CXCL9Q07325 125 aa23.98■■□□□ 1.43
LINC01238-205ENST00000567549 ZBTB38Q8NAP3 1195 aaPredicted RBP23.98■■□□□ 1.43
LINC01238-205ENST00000567549 CCDC191Q8NCU4 936 aa23.98■■□□□ 1.43
LINC01238-205ENST00000567549 RASSF10A6NK89 507 aa23.97■■□□□ 1.43
LINC01238-205ENST00000567549 WASHC4Q2M389 1173 aa23.97■■□□□ 1.43
LINC01238-205ENST00000567549 STK31Q9BXU1 1019 aa23.97■■□□□ 1.43
LINC01238-205ENST00000567549 ECE1P42892 770 aa23.96■■□□□ 1.43
LINC01238-205ENST00000567549 ZC3H15Q8WU90 426 aaKnown RBP23.96■■□□□ 1.43
LINC01238-205ENST00000567549 NSFL1CQ9UNZ2 370 aaKnown RBP23.96■■□□□ 1.43
LINC01238-205ENST00000567549 H7C1D1 291 aa23.95■■□□□ 1.42
LINC01238-205ENST00000567549 MAP2K1Q02750 393 aaPredicted RBP23.95■■□□□ 1.42
LINC01238-205ENST00000567549 CCDC152Q4G0S7 254 aa23.95■■□□□ 1.42
LINC01238-205ENST00000567549 TRPM7Q96QT4 1865 aa23.95■■□□□ 1.42
LINC01238-205ENST00000567549 C6orf229H3BNL8 230 aa23.94■■□□□ 1.42
LINC01238-205ENST00000567549 ELL2O00472 640 aaPredicted RBP23.94■■□□□ 1.42
LINC01238-205ENST00000567549 VEGFBP49765 207 aa23.94■■□□□ 1.42
LINC01238-205ENST00000567549 GMPSP49915 693 aaPredicted RBP23.94■■□□□ 1.42
LINC01238-205ENST00000567549 RPS8P62241 208 aaKnown RBP23.94■■□□□ 1.42
LINC01238-205ENST00000567549 NEXNQ0ZGT2 675 aa23.94■■□□□ 1.42
LINC01238-205ENST00000567549 CCDC27Q2M243 656 aa23.94■■□□□ 1.42
LINC01238-205ENST00000567549 CWC25Q9NXE8 425 aaPredicted RBP23.94■■□□□ 1.42
LINC01238-205ENST00000567549 LTBP1Q14766 1721 aa23.93■■□□□ 1.42
LINC01238-205ENST00000567549 G3V3G9 751 aa23.93■■□□□ 1.42
LINC01238-205ENST00000567549 PCCAP05165 728 aaPredicted RBP23.93■■□□□ 1.42
LINC01238-205ENST00000567549 CTCFP49711 727 aaPredicted RBP23.93■■□□□ 1.42
LINC01238-205ENST00000567549 NCBP3Q53F19 620 aaKnown RBP23.93■■□□□ 1.42
LINC01238-205ENST00000567549 DCAF8Q5TAQ9 597 aa23.93■■□□□ 1.42
LINC01238-205ENST00000567549 MYD88Q99836 296 aa23.93■■□□□ 1.42
LINC01238-205ENST00000567549 PCNTO95613 3336 aa23.93■■□□□ 1.42
LINC01238-205ENST00000567549 PDE8AO60658 829 aa23.92■■□□□ 1.42
LINC01238-205ENST00000567549 RAD17O75943 681 aa23.92■■□□□ 1.42
LINC01238-205ENST00000567549 RPS12P25398 132 aaKnown RBP23.92■■□□□ 1.42
LINC01238-205ENST00000567549 RTL5Q5HYW3 569 aaPredicted RBP23.92■■□□□ 1.42
LINC01238-205ENST00000567549 CELF1Q92879 486 aaKnown RBP23.92■■□□□ 1.42
LINC01238-205ENST00000567549 PHAXQ9H814 394 aaKnown RBP23.92■■□□□ 1.42
LINC01238-205ENST00000567549 DPF2Q92785 391 aa23.91■■□□□ 1.42
LINC01238-205ENST00000567549 BEGAINQ9BUH8 593 aa23.91■■□□□ 1.42
LINC01238-205ENST00000567549 METTL22Q9BUU2 404 aaPredicted RBP23.91■■□□□ 1.42
LINC01238-205ENST00000567549 PRDM10Q9NQV6 1147 aa23.91■■□□□ 1.42
LINC01238-205ENST00000567549 TAF1P21675 1872 aa23.91■■□□□ 1.42
LINC01238-205ENST00000567549 PAXIP1Q6ZW49 1069 aaPredicted RBP23.9■■□□□ 1.42
LINC01238-205ENST00000567549 ZC3H12CQ9C0D7 883 aaKnown RBP23.9■■□□□ 1.42
LINC01238-205ENST00000567549 ANKIB1Q9P2G1 1089 aa23.9■■□□□ 1.42
LINC01238-205ENST00000567549 WDR33Q9C0J8 1336 aaKnown RBP23.89■■□□□ 1.42
LINC01238-205ENST00000567549 C8orf58Q8NAV2 365 aa23.89■■□□□ 1.41
LINC01238-205ENST00000567549 CNOT7Q9UIV1 285 aaKnown RBP23.89■■□□□ 1.41
LINC01238-205ENST00000567549 IL16Q14005 1332 aa23.88■■□□□ 1.41
LINC01238-205ENST00000567549 DUOX1Q9NRD9 1551 aa23.88■■□□□ 1.41
LINC01238-205ENST00000567549 CDC37L1Q7L3B6 337 aa23.88■■□□□ 1.41
LINC01238-205ENST00000567549 SLC51AQ86UW1 340 aa23.88■■□□□ 1.41
LINC01238-205ENST00000567549 CDC5LQ99459 802 aaKnown RBP23.88■■□□□ 1.41
LINC01238-205ENST00000567549 PODXL2Q9NZ53 605 aa23.88■■□□□ 1.41
LINC01238-205ENST00000567549 PGAP2Q9UHJ9 254 aa23.88■■□□□ 1.41
LINC01238-205ENST00000567549 ANP32CO43423 234 aa23.87■■□□□ 1.41
LINC01238-205ENST00000567549 KSR2Q6VAB6 950 aa23.87■■□□□ 1.41
LINC01238-205ENST00000567549 ANKRD18AQ8IVF6 992 aa23.87■■□□□ 1.41
LINC01238-205ENST00000567549 ZNF428Q96B54 188 aa23.87■■□□□ 1.41
LINC01238-205ENST00000567549 GGA1Q9UJY5 639 aa23.87■■□□□ 1.41
LINC01238-205ENST00000567549 GPSM2P81274 684 aa23.86■■□□□ 1.41
LINC01238-205ENST00000567549 WBP1LQ9NX94 342 aa23.86■■□□□ 1.41
LINC01238-205ENST00000567549 MAP3K2Q9Y2U5 619 aa23.86■■□□□ 1.41
LINC01238-205ENST00000567549 RIMBP2O15034 1052 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 FOXN1O15353 648 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 ECE2O60344 883 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 WWC1Q8IX03 1113 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 MICALL2Q8IY33 904 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 TBC1D16Q8TBP0 767 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 HHIPL1Q96JK4 782 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 DBNDD1Q9H9R9 158 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 POLLQ9UGP5 575 aa23.85■■□□□ 1.41
LINC01238-205ENST00000567549 TLL2Q9Y6L7 1015 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms