RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 TAF1P21675 1872 aa25.68■■□□□ 1.7
SCAMP5-213ENST00000567535 MPNDQ8N594 471 aa25.68■■□□□ 1.7
SCAMP5-213ENST00000567535 ISCA1Q9BUE6 129 aa25.68■■□□□ 1.7
SCAMP5-213ENST00000567535 HYPKQ9NX55 129 aa25.68■■□□□ 1.7
SCAMP5-213ENST00000567535 ZNF853P0CG23 659 aa25.67■■□□□ 1.7
SCAMP5-213ENST00000567535 VEGFBP49765 207 aa25.67■■□□□ 1.7
SCAMP5-213ENST00000567535 KIAA2012Q0VF49 1180 aa25.67■■□□□ 1.7
SCAMP5-213ENST00000567535 USP50Q70EL3 339 aaPredicted RBP25.67■■□□□ 1.7
SCAMP5-213ENST00000567535 TMC4Q7Z404 712 aa25.67■■□□□ 1.7
SCAMP5-213ENST00000567535 RASSF10A6NK89 507 aa25.66■■□□□ 1.7
SCAMP5-213ENST00000567535 CXCL9Q07325 125 aa25.66■■□□□ 1.7
SCAMP5-213ENST00000567535 ZNF428Q96B54 188 aa25.66■■□□□ 1.7
SCAMP5-213ENST00000567535 GPRC5DQ9NZD1 345 aa25.66■■□□□ 1.7
SCAMP5-213ENST00000567535 ATP5J2-PTCD1G3V325 749 aa25.64■■□□□ 1.7
SCAMP5-213ENST00000567535 APAF1O14727 1248 aa25.64■■□□□ 1.7
SCAMP5-213ENST00000567535 FAM89AQ96GI7 184 aa25.64■■□□□ 1.7
SCAMP5-213ENST00000567535 IFT57Q9NWB7 429 aa25.64■■□□□ 1.7
SCAMP5-213ENST00000567535 SF3B3Q15393 1217 aaKnown RBP25.63■■□□□ 1.69
SCAMP5-213ENST00000567535 ADARB2Q9NS39 739 aaKnown RBP25.63■■□□□ 1.69
SCAMP5-213ENST00000567535 CDHR2Q9BYE9 1310 aa25.63■■□□□ 1.69
SCAMP5-213ENST00000567535 GNAI1P63096 354 aa25.62■■□□□ 1.69
SCAMP5-213ENST00000567535 CALD1Q05682 793 aaKnown RBP25.62■■□□□ 1.69
SCAMP5-213ENST00000567535 TRIM28Q13263 835 aaKnown RBP25.62■■□□□ 1.69
SCAMP5-213ENST00000567535 FOXN1O15353 648 aa25.61■■□□□ 1.69
SCAMP5-213ENST00000567535 GMPSP49915 693 aaPredicted RBP25.61■■□□□ 1.69
SCAMP5-213ENST00000567535 DEFB115Q30KQ5 88 aa25.61■■□□□ 1.69
SCAMP5-213ENST00000567535 CIAPIN1Q6FI81 312 aa25.61■■□□□ 1.69
SCAMP5-213ENST00000567535 ABT1Q9ULW3 272 aaKnown RBP25.61■■□□□ 1.69
SCAMP5-213ENST00000567535 COL4A1P02462 1669 aa25.61■■□□□ 1.69
SCAMP5-213ENST00000567535 TRPM7Q96QT4 1865 aa25.6■■□□□ 1.69
SCAMP5-213ENST00000567535 GOLGA2Q08379 1002 aa25.59■■□□□ 1.69
SCAMP5-213ENST00000567535 CELF1Q92879 486 aaKnown RBP25.59■■□□□ 1.69
SCAMP5-213ENST00000567535 THSD7BQ9C0I4 1608 aa25.59■■□□□ 1.69
SCAMP5-213ENST00000567535 RAD17O75943 681 aa25.58■■□□□ 1.69
SCAMP5-213ENST00000567535 FMR1Q06787 632 aaKnown RBP eCLIP25.58■■□□□ 1.69
SCAMP5-213ENST00000567535 TNIP1Q15025 636 aa25.58■■□□□ 1.69
SCAMP5-213ENST00000567535 RTL5Q5HYW3 569 aaPredicted RBP25.58■■□□□ 1.69
SCAMP5-213ENST00000567535 RIC3Q7Z5B4 369 aa25.58■■□□□ 1.69
SCAMP5-213ENST00000567535 AIDAQ96BJ3 306 aa25.58■■□□□ 1.69
SCAMP5-213ENST00000567535 YDJCA8MPS7 323 aa25.57■■□□□ 1.68
SCAMP5-213ENST00000567535 TRAF5O00463 557 aa25.57■■□□□ 1.68
SCAMP5-213ENST00000567535 IRS4O14654 1257 aaPredicted RBP25.57■■□□□ 1.68
SCAMP5-213ENST00000567535 CAPN15O75808 1086 aa25.57■■□□□ 1.68
SCAMP5-213ENST00000567535 PHAXQ9H814 394 aaKnown RBP25.57■■□□□ 1.68
SCAMP5-213ENST00000567535 WBP1LQ9NX94 342 aa25.57■■□□□ 1.68
SCAMP5-213ENST00000567535 WDR33Q9C0J8 1336 aaKnown RBP25.57■■□□□ 1.68
SCAMP5-213ENST00000567535 ELL2O00472 640 aaPredicted RBP25.56■■□□□ 1.68
SCAMP5-213ENST00000567535 BCL2L13Q9BXK5 485 aa25.56■■□□□ 1.68
SCAMP5-213ENST00000567535 NSFL1CQ9UNZ2 370 aaKnown RBP25.56■■□□□ 1.68
SCAMP5-213ENST00000567535 CTCFP49711 727 aaPredicted RBP25.55■■□□□ 1.68
SCAMP5-213ENST00000567535 WASHC4Q2M389 1173 aa25.55■■□□□ 1.68
SCAMP5-213ENST00000567535 CST9Q5W186 159 aa25.55■■□□□ 1.68
SCAMP5-213ENST00000567535 ZBTB38Q8NAP3 1195 aaPredicted RBP25.55■■□□□ 1.68
SCAMP5-213ENST00000567535 PRDM10Q9NQV6 1147 aa25.55■■□□□ 1.68
SCAMP5-213ENST00000567535 C8orf58Q8NAV2 365 aa25.54■■□□□ 1.68
SCAMP5-213ENST00000567535 PGAP2Q9UHJ9 254 aa25.54■■□□□ 1.68
SCAMP5-213ENST00000567535 HSP90B1P14625 803 aaKnown RBP25.52■■□□□ 1.68
SCAMP5-213ENST00000567535 GPSM2P81274 684 aa25.52■■□□□ 1.68
SCAMP5-213ENST00000567535 ZC3H15Q8WU90 426 aaKnown RBP25.52■■□□□ 1.68
SCAMP5-213ENST00000567535 MYD88Q99836 296 aa25.52■■□□□ 1.68
SCAMP5-213ENST00000567535 POLLQ9UGP5 575 aa25.52■■□□□ 1.68
SCAMP5-213ENST00000567535 HIRAP54198 1017 aaPredicted RBP25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 RPS8P62241 208 aaKnown RBP25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 MAP2K1Q02750 393 aaPredicted RBP25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 CCDC191Q8NCU4 936 aa25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 TRPM4Q8TD43 1214 aa25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 CAPNS2Q96L46 248 aa25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 CHMP4AQ9BY43 222 aa25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 CNOT7Q9UIV1 285 aaKnown RBP25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 TLL2Q9Y6L7 1015 aa25.51■■□□□ 1.67
SCAMP5-213ENST00000567535 C6orf229H3BNL8 230 aa25.5■■□□□ 1.67
SCAMP5-213ENST00000567535 ECE1P42892 770 aa25.5■■□□□ 1.67
SCAMP5-213ENST00000567535 EYA3Q99504 573 aa25.5■■□□□ 1.67
SCAMP5-213ENST00000567535 GLIS2Q9BZE0 524 aaPredicted RBP25.5■■□□□ 1.67
SCAMP5-213ENST00000567535 DBNDD1Q9H9R9 158 aa25.5■■□□□ 1.67
SCAMP5-213ENST00000567535 SHTN1A0MZ66 631 aa25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 RIMBP2O15034 1052 aa25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 DDX58O95786 925 aaKnown RBP25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 PCCAP05165 728 aaPredicted RBP25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 CCDC30Q5VVM6 783 aa25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 PAXIP1Q6ZW49 1069 aaPredicted RBP25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 MICALL2Q8IY33 904 aa25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 DPF2Q92785 391 aa25.49■■□□□ 1.67
SCAMP5-213ENST00000567535 H7C1D1 291 aa25.48■■□□□ 1.67
SCAMP5-213ENST00000567535 PSMD14O00487 310 aa25.48■■□□□ 1.67
SCAMP5-213ENST00000567535 TBC1D16Q8TBP0 767 aa25.48■■□□□ 1.67
SCAMP5-213ENST00000567535 METTL22Q9BUU2 404 aaPredicted RBP25.48■■□□□ 1.67
SCAMP5-213ENST00000567535 SEC31BQ9NQW1 1179 aa25.48■■□□□ 1.67
SCAMP5-213ENST00000567535 CWC25Q9NXE8 425 aaPredicted RBP25.48■■□□□ 1.67
SCAMP5-213ENST00000567535 ZBTB12Q9Y330 459 aaPredicted RBP25.48■■□□□ 1.67
SCAMP5-213ENST00000567535 ECE2O60344 883 aa25.47■■□□□ 1.67
SCAMP5-213ENST00000567535 CELF2O95319 508 aaKnown RBP25.47■■□□□ 1.67
SCAMP5-213ENST00000567535 LBX1P52954 281 aa25.47■■□□□ 1.67
SCAMP5-213ENST00000567535 CCDC152Q4G0S7 254 aa25.47■■□□□ 1.67
SCAMP5-213ENST00000567535 CYP4F22Q6NT55 531 aa25.47■■□□□ 1.67
SCAMP5-213ENST00000567535 TSPYL6Q8N831 410 aa25.47■■□□□ 1.67
SCAMP5-213ENST00000567535 PODXL2Q9NZ53 605 aa25.47■■□□□ 1.67
SCAMP5-213ENST00000567535 RTL9Q8NET4 1388 aa25.46■■□□□ 1.67
SCAMP5-213ENST00000567535 PDE8AO60658 829 aa25.46■■□□□ 1.67
SCAMP5-213ENST00000567535 CDC37L1Q7L3B6 337 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms