RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 GNAI1P63096 354 aa19.46■□□□□ 0.71
RNF40-209ENST00000566703 KIAA2012Q0VF49 1180 aa19.46■□□□□ 0.71
RNF40-209ENST00000566703 SLC51AQ86UW1 340 aa19.46■□□□□ 0.71
RNF40-209ENST00000566703 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
RNF40-209ENST00000566703 ADAMTSL1Q8N6G6 1762 aa19.46■□□□□ 0.71
RNF40-209ENST00000566703 APAF1O14727 1248 aa19.45■□□□□ 0.7
RNF40-209ENST00000566703 CXCL9Q07325 125 aa19.45■□□□□ 0.7
RNF40-209ENST00000566703 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
RNF40-209ENST00000566703 RASSF10A6NK89 507 aa19.44■□□□□ 0.7
RNF40-209ENST00000566703 DEFB115Q30KQ5 88 aa19.44■□□□□ 0.7
RNF40-209ENST00000566703 FAM89AQ96GI7 184 aa19.44■□□□□ 0.7
RNF40-209ENST00000566703 ADARB2Q9NS39 739 aaKnown RBP19.44■□□□□ 0.7
RNF40-209ENST00000566703 GPRC5DQ9NZD1 345 aa19.44■□□□□ 0.7
RNF40-209ENST00000566703 ATP5J2-PTCD1G3V325 749 aa19.43■□□□□ 0.7
RNF40-209ENST00000566703 HSP90B1P14625 803 aaKnown RBP19.43■□□□□ 0.7
RNF40-209ENST00000566703 VEGFBP49765 207 aa19.43■□□□□ 0.7
RNF40-209ENST00000566703 TNIP1Q15025 636 aa19.43■□□□□ 0.7
RNF40-209ENST00000566703 CIAPIN1Q6FI81 312 aa19.43■□□□□ 0.7
RNF40-209ENST00000566703 CDHR2Q9BYE9 1310 aa19.43■□□□□ 0.7
RNF40-209ENST00000566703 ANKRD36CQ5JPF3 1778 aa19.42■□□□□ 0.7
RNF40-209ENST00000566703 GOLGA2Q08379 1002 aa19.41■□□□□ 0.7
RNF40-209ENST00000566703 RIC3Q7Z5B4 369 aa19.41■□□□□ 0.7
RNF40-209ENST00000566703 IRS4O14654 1257 aaPredicted RBP19.4■□□□□ 0.7
RNF40-209ENST00000566703 ZBTB38Q8NAP3 1195 aaPredicted RBP19.4■□□□□ 0.7
RNF40-209ENST00000566703 PGAP2Q9UHJ9 254 aa19.4■□□□□ 0.7
RNF40-209ENST00000566703 GMPSP49915 693 aaPredicted RBP19.39■□□□□ 0.69
RNF40-209ENST00000566703 ZC3H15Q8WU90 426 aaKnown RBP19.39■□□□□ 0.69
RNF40-209ENST00000566703 CELF1Q92879 486 aaKnown RBP19.39■□□□□ 0.69
RNF40-209ENST00000566703 PRDM10Q9NQV6 1147 aa19.39■□□□□ 0.69
RNF40-209ENST00000566703 WBP1LQ9NX94 342 aa19.39■□□□□ 0.69
RNF40-209ENST00000566703 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
RNF40-209ENST00000566703 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
RNF40-209ENST00000566703 ELL2O00472 640 aaPredicted RBP19.38■□□□□ 0.69
RNF40-209ENST00000566703 RPS8P62241 208 aaKnown RBP19.38■□□□□ 0.69
RNF40-209ENST00000566703 WASHC4Q2M389 1173 aa19.38■□□□□ 0.69
RNF40-209ENST00000566703 CCDC30Q5VVM6 783 aa19.38■□□□□ 0.69
RNF40-209ENST00000566703 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
RNF40-209ENST00000566703 AIDAQ96BJ3 306 aa19.38■□□□□ 0.69
RNF40-209ENST00000566703 BCL2L13Q9BXK5 485 aa19.38■□□□□ 0.69
RNF40-209ENST00000566703 PHAXQ9H814 394 aaKnown RBP19.38■□□□□ 0.69
RNF40-209ENST00000566703 ABT1Q9ULW3 272 aaKnown RBP19.38■□□□□ 0.69
RNF40-209ENST00000566703 FOXN1O15353 648 aa19.37■□□□□ 0.69
RNF40-209ENST00000566703 RAD17O75943 681 aa19.37■□□□□ 0.69
RNF40-209ENST00000566703 CTCFP49711 727 aaPredicted RBP19.37■□□□□ 0.69
RNF40-209ENST00000566703 C8orf58Q8NAV2 365 aa19.37■□□□□ 0.69
RNF40-209ENST00000566703 LAMB2P55268 1798 aa19.37■□□□□ 0.69
RNF40-209ENST00000566703 WDR33Q9C0J8 1336 aaKnown RBP19.36■□□□□ 0.69
RNF40-209ENST00000566703 YDJCA8MPS7 323 aa19.36■□□□□ 0.69
RNF40-209ENST00000566703 DDX58O95786 925 aaKnown RBP19.36■□□□□ 0.69
RNF40-209ENST00000566703 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
RNF40-209ENST00000566703 CST9Q5W186 159 aa19.36■□□□□ 0.69
RNF40-209ENST00000566703 DPF2Q92785 391 aa19.36■□□□□ 0.69
RNF40-209ENST00000566703 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
RNF40-209ENST00000566703 EYA3Q99504 573 aa19.36■□□□□ 0.69
RNF40-209ENST00000566703 CNOT7Q9UIV1 285 aaKnown RBP19.36■□□□□ 0.69
RNF40-209ENST00000566703 C6orf229H3BNL8 230 aa19.35■□□□□ 0.69
RNF40-209ENST00000566703 H7C1D1 291 aa19.35■□□□□ 0.69
RNF40-209ENST00000566703 PCCAP05165 728 aaPredicted RBP19.35■□□□□ 0.69
RNF40-209ENST00000566703 ECE1P42892 770 aa19.35■□□□□ 0.69
RNF40-209ENST00000566703 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
RNF40-209ENST00000566703 RTL5Q5HYW3 569 aaPredicted RBP19.35■□□□□ 0.69
RNF40-209ENST00000566703 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
RNF40-209ENST00000566703 GPSM2P81274 684 aa19.34■□□□□ 0.69
RNF40-209ENST00000566703 NCBP3Q53F19 620 aaKnown RBP19.34■□□□□ 0.69
RNF40-209ENST00000566703 MYD88Q99836 296 aa19.34■□□□□ 0.69
RNF40-209ENST00000566703 PODXL2Q9NZ53 605 aa19.34■□□□□ 0.69
RNF40-209ENST00000566703 POLLQ9UGP5 575 aa19.34■□□□□ 0.69
RNF40-209ENST00000566703 TRAF5O00463 557 aa19.33■□□□□ 0.68
RNF40-209ENST00000566703 PDE8AO60658 829 aa19.33■□□□□ 0.68
RNF40-209ENST00000566703 HIRAP54198 1017 aaPredicted RBP19.33■□□□□ 0.68
RNF40-209ENST00000566703 FMR1Q06787 632 aaKnown RBP eCLIP19.33■□□□□ 0.68
RNF40-209ENST00000566703 CDC37L1Q7L3B6 337 aa19.33■□□□□ 0.68
RNF40-209ENST00000566703 CWC25Q9NXE8 425 aaPredicted RBP19.33■□□□□ 0.68
RNF40-209ENST00000566703 TLL2Q9Y6L7 1015 aa19.33■□□□□ 0.68
RNF40-209ENST00000566703 DDX60Q8IY21 1712 aaKnown RBP19.32■□□□□ 0.68
RNF40-209ENST00000566703 RPS12P25398 132 aaKnown RBP19.32■□□□□ 0.68
RNF40-209ENST00000566703 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
RNF40-209ENST00000566703 TBC1D16Q8TBP0 767 aa19.32■□□□□ 0.68
RNF40-209ENST00000566703 CAPNS2Q96L46 248 aa19.32■□□□□ 0.68
RNF40-209ENST00000566703 ZC3H12CQ9C0D7 883 aaKnown RBP19.32■□□□□ 0.68
RNF40-209ENST00000566703 PSMD14O00487 310 aa19.31■□□□□ 0.68
RNF40-209ENST00000566703 RIMBP2O15034 1052 aa19.31■□□□□ 0.68
RNF40-209ENST00000566703 KSR2Q6VAB6 950 aa19.31■□□□□ 0.68
RNF40-209ENST00000566703 HHIPL1Q96JK4 782 aa19.31■□□□□ 0.68
RNF40-209ENST00000566703 DUOX1Q9NRD9 1551 aa19.31■□□□□ 0.68
RNF40-209ENST00000566703 LRRC37AA6NMS7 1700 aa19.31■□□□□ 0.68
RNF40-209ENST00000566703 MAP2K2P36507 400 aa19.3■□□□□ 0.68
RNF40-209ENST00000566703 MICALL2Q8IY33 904 aa19.3■□□□□ 0.68
RNF40-209ENST00000566703 TSPYL6Q8N831 410 aa19.3■□□□□ 0.68
RNF40-209ENST00000566703 TRPM4Q8TD43 1214 aa19.3■□□□□ 0.68
RNF40-209ENST00000566703 DBNDD1Q9H9R9 158 aa19.3■□□□□ 0.68
RNF40-209ENST00000566703 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
RNF40-209ENST00000566703 ECE2O60344 883 aa19.29■□□□□ 0.68
RNF40-209ENST00000566703 CELF2O95319 508 aaKnown RBP19.29■□□□□ 0.68
RNF40-209ENST00000566703 WWC1Q8IX03 1113 aa19.29■□□□□ 0.68
RNF40-209ENST00000566703 GPR101Q96P66 508 aaPredicted RBP19.29■□□□□ 0.68
RNF40-209ENST00000566703 STK31Q9BXU1 1019 aa19.29■□□□□ 0.68
RNF40-209ENST00000566703 GLIS2Q9BZE0 524 aaPredicted RBP19.29■□□□□ 0.68
RNF40-209ENST00000566703 SEC31BQ9NQW1 1179 aa19.29■□□□□ 0.68
RNF40-209ENST00000566703 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms