RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 GOLGA2Q08379 1002 aa35.83■■■■□ 3.33
UBFD1-206ENST00000566669 AOC3Q16853 763 aa35.83■■■■□ 3.33
UBFD1-206ENST00000566669 SCNN1DP51172 638 aa35.82■■■■□ 3.32
UBFD1-206ENST00000566669 SF3B3Q15393 1217 aaKnown RBP35.82■■■■□ 3.32
UBFD1-206ENST00000566669 MKRN1Q9UHC7 482 aaKnown RBP35.82■■■■□ 3.32
UBFD1-206ENST00000566669 CDHR2Q9BYE9 1310 aa35.82■■■■□ 3.32
UBFD1-206ENST00000566669 KIAA2012Q0VF49 1180 aa35.81■■■■□ 3.32
UBFD1-206ENST00000566669 MAP1SQ66K74 1059 aaPredicted RBP35.79■■■■□ 3.32
UBFD1-206ENST00000566669 RIC3Q7Z5B4 369 aa35.79■■■■□ 3.32
UBFD1-206ENST00000566669 LAMB2P55268 1798 aa35.79■■■■□ 3.32
UBFD1-206ENST00000566669 TNIP1Q15025 636 aa35.78■■■■□ 3.32
UBFD1-206ENST00000566669 COL13A1Q5TAT6 717 aaPredicted RBP35.77■■■■□ 3.32
UBFD1-206ENST00000566669 FAM89AQ96GI7 184 aa35.77■■■■□ 3.32
UBFD1-206ENST00000566669 ADARB2Q9NS39 739 aaKnown RBP35.77■■■■□ 3.32
UBFD1-206ENST00000566669 ATP5J2-PTCD1G3V325 749 aa35.76■■■■□ 3.32
UBFD1-206ENST00000566669 EPS15P42566 896 aa35.76■■■■□ 3.32
UBFD1-206ENST00000566669 GPRC5DQ9NZD1 345 aa35.76■■■■□ 3.32
UBFD1-206ENST00000566669 DDX58O95786 925 aaKnown RBP35.75■■■■□ 3.31
UBFD1-206ENST00000566669 CXCL9Q07325 125 aa35.75■■■■□ 3.31
UBFD1-206ENST00000566669 CCDC30Q5VVM6 783 aa35.74■■■■□ 3.31
UBFD1-206ENST00000566669 CIAPIN1Q6FI81 312 aa35.74■■■■□ 3.31
UBFD1-206ENST00000566669 ZBTB38Q8NAP3 1195 aaPredicted RBP35.74■■■■□ 3.31
UBFD1-206ENST00000566669 IRS4O14654 1257 aaPredicted RBP35.73■■■■□ 3.31
UBFD1-206ENST00000566669 RASSF10A6NK89 507 aa35.72■■■■□ 3.31
UBFD1-206ENST00000566669 SLC51AQ86UW1 340 aa35.72■■■■□ 3.31
UBFD1-206ENST00000566669 CCDC191Q8NCU4 936 aa35.72■■■■□ 3.31
UBFD1-206ENST00000566669 CCDC27Q2M243 656 aa35.7■■■■□ 3.31
UBFD1-206ENST00000566669 DEFB115Q30KQ5 88 aa35.7■■■■□ 3.31
UBFD1-206ENST00000566669 TNS4Q8IZW8 715 aa35.7■■■■□ 3.31
UBFD1-206ENST00000566669 LRRC37AA6NMS7 1700 aa35.69■■■■□ 3.3
UBFD1-206ENST00000566669 LTBP1Q14766 1721 aa35.69■■■■□ 3.3
UBFD1-206ENST00000566669 DDX60Q8IY21 1712 aaKnown RBP35.69■■■■□ 3.3
UBFD1-206ENST00000566669 NCBP3Q53F19 620 aaKnown RBP35.69■■■■□ 3.3
UBFD1-206ENST00000566669 ELL2O00472 640 aaPredicted RBP35.68■■■■□ 3.3
UBFD1-206ENST00000566669 ZEB1P37275 1124 aaPredicted RBP35.68■■■■□ 3.3
UBFD1-206ENST00000566669 VEGFBP49765 207 aa35.68■■■■□ 3.3
UBFD1-206ENST00000566669 WASHC4Q2M389 1173 aa35.68■■■■□ 3.3
UBFD1-206ENST00000566669 EYA3Q99504 573 aa35.68■■■■□ 3.3
UBFD1-206ENST00000566669 BCL2L13Q9BXK5 485 aa35.68■■■■□ 3.3
UBFD1-206ENST00000566669 GMPSP49915 693 aaPredicted RBP35.67■■■■□ 3.3
UBFD1-206ENST00000566669 RPS8P62241 208 aaKnown RBP35.67■■■■□ 3.3
UBFD1-206ENST00000566669 ZC3H15Q8WU90 426 aaKnown RBP35.67■■■■□ 3.3
UBFD1-206ENST00000566669 AIDAQ96BJ3 306 aa35.67■■■■□ 3.3
UBFD1-206ENST00000566669 PHAXQ9H814 394 aaKnown RBP35.67■■■■□ 3.3
UBFD1-206ENST00000566669 NSFL1CQ9UNZ2 370 aaKnown RBP35.67■■■■□ 3.3
UBFD1-206ENST00000566669 C8orf58Q8NAV2 365 aa35.66■■■■□ 3.3
UBFD1-206ENST00000566669 CELF1Q92879 486 aaKnown RBP35.66■■■■□ 3.3
UBFD1-206ENST00000566669 ABT1Q9ULW3 272 aaKnown RBP35.66■■■■□ 3.3
UBFD1-206ENST00000566669 PCCAP05165 728 aaPredicted RBP35.65■■■■□ 3.3
UBFD1-206ENST00000566669 CWC25Q9NXE8 425 aaPredicted RBP35.65■■■■□ 3.3
UBFD1-206ENST00000566669 CCDC152Q4G0S7 254 aa35.64■■■■□ 3.3
UBFD1-206ENST00000566669 MYD88Q99836 296 aa35.64■■■■□ 3.3
UBFD1-206ENST00000566669 RAD17O75943 681 aa35.63■■■■□ 3.29
UBFD1-206ENST00000566669 RTL5Q5HYW3 569 aaPredicted RBP35.63■■■■□ 3.29
UBFD1-206ENST00000566669 METTL22Q9BUU2 404 aaPredicted RBP35.63■■■■□ 3.29
UBFD1-206ENST00000566669 STK31Q9BXU1 1019 aa35.63■■■■□ 3.29
UBFD1-206ENST00000566669 PGAP2Q9UHJ9 254 aa35.63■■■■□ 3.29
UBFD1-206ENST00000566669 DPF2Q92785 391 aa35.62■■■■□ 3.29
UBFD1-206ENST00000566669 DUOX1Q9NRD9 1551 aa35.62■■■■□ 3.29
UBFD1-206ENST00000566669 C6orf229H3BNL8 230 aa35.61■■■■□ 3.29
UBFD1-206ENST00000566669 H7C1D1 291 aa35.61■■■■□ 3.29
UBFD1-206ENST00000566669 PDE8AO60658 829 aa35.61■■■■□ 3.29
UBFD1-206ENST00000566669 ECE1P42892 770 aa35.61■■■■□ 3.29
UBFD1-206ENST00000566669 MAP2K1Q02750 393 aaPredicted RBP35.6■■■■□ 3.29
UBFD1-206ENST00000566669 ZNF428Q96B54 188 aa35.6■■■■□ 3.29
UBFD1-206ENST00000566669 PODXL2Q9NZ53 605 aa35.6■■■■□ 3.29
UBFD1-206ENST00000566669 IL16Q14005 1332 aa35.59■■■■□ 3.29
UBFD1-206ENST00000566669 RPS12P25398 132 aaKnown RBP35.59■■■■□ 3.29
UBFD1-206ENST00000566669 CTCFP49711 727 aaPredicted RBP35.59■■■■□ 3.29
UBFD1-206ENST00000566669 PRDM10Q9NQV6 1147 aa35.59■■■■□ 3.29
UBFD1-206ENST00000566669 YDJCA8MPS7 323 aa35.58■■■■□ 3.29
UBFD1-206ENST00000566669 GPSM2P81274 684 aa35.58■■■■□ 3.29
UBFD1-206ENST00000566669 NEXNQ0ZGT2 675 aa35.58■■■■□ 3.29
UBFD1-206ENST00000566669 CNOT7Q9UIV1 285 aaKnown RBP35.58■■■■□ 3.29
UBFD1-206ENST00000566669 WDR33Q9C0J8 1336 aaKnown RBP35.57■■■■□ 3.29
UBFD1-206ENST00000566669 KSR2Q6VAB6 950 aa35.57■■■■□ 3.28
UBFD1-206ENST00000566669 WWC1Q8IX03 1113 aa35.57■■■■□ 3.28
UBFD1-206ENST00000566669 WBP1LQ9NX94 342 aa35.57■■■■□ 3.28
UBFD1-206ENST00000566669 POLLQ9UGP5 575 aa35.57■■■■□ 3.28
UBFD1-206ENST00000566669 ZC3H12CQ9C0D7 883 aaKnown RBP35.56■■■■□ 3.28
UBFD1-206ENST00000566669 TAF1P21675 1872 aa35.55■■■■□ 3.28
UBFD1-206ENST00000566669 TBC1D16Q8TBP0 767 aa35.55■■■■□ 3.28
UBFD1-206ENST00000566669 MAP3K2Q9Y2U5 619 aa35.55■■■■□ 3.28
UBFD1-206ENST00000566669 FOXN1O15353 648 aa35.54■■■■□ 3.28
UBFD1-206ENST00000566669 CDC37L1Q7L3B6 337 aa35.54■■■■□ 3.28
UBFD1-206ENST00000566669 TLL2Q9Y6L7 1015 aa35.54■■■■□ 3.28
UBFD1-206ENST00000566669 TSPYL6Q8N831 410 aa35.53■■■■□ 3.28
UBFD1-206ENST00000566669 ANKIB1Q9P2G1 1089 aa35.53■■■■□ 3.28
UBFD1-206ENST00000566669 TWISTNBQ3B726 338 aaPredicted RBP35.52■■■■□ 3.28
UBFD1-206ENST00000566669 CST9Q5W186 159 aa35.52■■■■□ 3.28
UBFD1-206ENST00000566669 MICALL2Q8IY33 904 aa35.52■■■■□ 3.28
UBFD1-206ENST00000566669 HHIPL1Q96JK4 782 aa35.52■■■■□ 3.28
UBFD1-206ENST00000566669 DBNDD1Q9H9R9 158 aa35.52■■■■□ 3.28
UBFD1-206ENST00000566669 GGA1Q9UJY5 639 aa35.52■■■■□ 3.28
UBFD1-206ENST00000566669 PI4KAP2A4QPH2 592 aa35.51■■■■□ 3.28
UBFD1-206ENST00000566669 TRAF5O00463 557 aa35.51■■■■□ 3.28
UBFD1-206ENST00000566669 PSMD14O00487 310 aa35.51■■■■□ 3.28
UBFD1-206ENST00000566669 RIMBP2O15034 1052 aa35.51■■■■□ 3.28
UBFD1-206ENST00000566669 ECE2O60344 883 aa35.51■■■■□ 3.28
UBFD1-206ENST00000566669 ANKRD18AQ8IVF6 992 aa35.51■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms