RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
UBR1-206ENST00000566493 HSPA1AP0DMV8 641 aaKnown RBP15.5■□□□□ 0.07
UBR1-206ENST00000566493 HSPA1BP0DMV9 641 aaKnown RBP15.5■□□□□ 0.07
UBR1-206ENST00000566493 CALD1Q05682 793 aaKnown RBP15.5■□□□□ 0.07
UBR1-206ENST00000566493 DUSP27Q5VZP5 1158 aa15.5■□□□□ 0.07
UBR1-206ENST00000566493 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
UBR1-206ENST00000566493 HYPKQ9NX55 129 aa15.5■□□□□ 0.07
UBR1-206ENST00000566493 AOC3Q16853 763 aa15.49■□□□□ 0.07
UBR1-206ENST00000566493 COL13A1Q5TAT6 717 aaPredicted RBP15.49■□□□□ 0.07
UBR1-206ENST00000566493 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
UBR1-206ENST00000566493 MPNDQ8N594 471 aa15.49■□□□□ 0.07
UBR1-206ENST00000566493 COL4A5P29400 1685 aa15.48■□□□□ 0.07
UBR1-206ENST00000566493 APAF1O14727 1248 aa15.48■□□□□ 0.07
UBR1-206ENST00000566493 GNAI1P63096 354 aa15.48■□□□□ 0.07
UBR1-206ENST00000566493 GRAPQ13588 217 aa15.48■□□□□ 0.07
UBR1-206ENST00000566493 MAP1SQ66K74 1059 aaPredicted RBP15.48■□□□□ 0.07
UBR1-206ENST00000566493 TMC4Q7Z404 712 aa15.48■□□□□ 0.07
UBR1-206ENST00000566493 SLC51AQ86UW1 340 aa15.48■□□□□ 0.07
UBR1-206ENST00000566493 GRAPLQ8TC17 118 aaPredicted RBP15.48■□□□□ 0.07
UBR1-206ENST00000566493 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
UBR1-206ENST00000566493 ADAMTSL1Q8N6G6 1762 aa15.47■□□□□ 0.07
UBR1-206ENST00000566493 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
UBR1-206ENST00000566493 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
UBR1-206ENST00000566493 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
UBR1-206ENST00000566493 ZNRF3Q9ULT6 936 aa15.47■□□□□ 0.07
UBR1-206ENST00000566493 CNTNAP1P78357 1384 aa15.47■□□□□ 0.07
UBR1-206ENST00000566493 PCNTO95613 3336 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 ATP5J2-PTCD1G3V325 749 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 EPS15P42566 896 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 SCNN1DP51172 638 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 USP50Q70EL3 339 aaPredicted RBP15.46■□□□□ 0.07
UBR1-206ENST00000566493 RIC3Q7Z5B4 369 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 FAM89AQ96GI7 184 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
UBR1-206ENST00000566493 ZNF853P0CG23 659 aa15.45■□□□□ 0.06
UBR1-206ENST00000566493 TNS4Q8IZW8 715 aa15.45■□□□□ 0.06
UBR1-206ENST00000566493 CHMP4AQ9BY43 222 aa15.45■□□□□ 0.06
UBR1-206ENST00000566493 ELL2O00472 640 aaPredicted RBP15.44■□□□□ 0.06
UBR1-206ENST00000566493 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
UBR1-206ENST00000566493 CXCL9Q07325 125 aa15.44■□□□□ 0.06
UBR1-206ENST00000566493 KIAA2012Q0VF49 1180 aa15.44■□□□□ 0.06
UBR1-206ENST00000566493 TNIP1Q15025 636 aa15.44■□□□□ 0.06
UBR1-206ENST00000566493 TAF1P21675 1872 aa15.44■□□□□ 0.06
UBR1-206ENST00000566493 LTBP1Q14766 1721 aa15.43■□□□□ 0.06
UBR1-206ENST00000566493 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
UBR1-206ENST00000566493 VEGFBP49765 207 aa15.43■□□□□ 0.06
UBR1-206ENST00000566493 TRIM28Q13263 835 aaKnown RBP15.43■□□□□ 0.06
UBR1-206ENST00000566493 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
UBR1-206ENST00000566493 SF3B3Q15393 1217 aaKnown RBP15.43■□□□□ 0.06
UBR1-206ENST00000566493 DEFB115Q30KQ5 88 aa15.43■□□□□ 0.06
UBR1-206ENST00000566493 RTL5Q5HYW3 569 aaPredicted RBP15.43■□□□□ 0.06
UBR1-206ENST00000566493 CIAPIN1Q6FI81 312 aa15.43■□□□□ 0.06
UBR1-206ENST00000566493 BCL2L13Q9BXK5 485 aa15.43■□□□□ 0.06
UBR1-206ENST00000566493 ADARB2Q9NS39 739 aaKnown RBP15.43■□□□□ 0.06
UBR1-206ENST00000566493 GPRC5DQ9NZD1 345 aa15.43■□□□□ 0.06
UBR1-206ENST00000566493 ABT1Q9ULW3 272 aaKnown RBP15.43■□□□□ 0.06
UBR1-206ENST00000566493 IRS4O14654 1257 aaPredicted RBP15.42■□□□□ 0.06
UBR1-206ENST00000566493 AIDAQ96BJ3 306 aa15.42■□□□□ 0.06
UBR1-206ENST00000566493 RAD17O75943 681 aa15.41■□□□□ 0.06
UBR1-206ENST00000566493 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
UBR1-206ENST00000566493 GMPSP49915 693 aaPredicted RBP15.41■□□□□ 0.06
UBR1-206ENST00000566493 CELF1Q92879 486 aaKnown RBP15.41■□□□□ 0.06
UBR1-206ENST00000566493 PHAXQ9H814 394 aaKnown RBP15.41■□□□□ 0.06
UBR1-206ENST00000566493 NSFL1CQ9UNZ2 370 aaKnown RBP15.41■□□□□ 0.06
UBR1-206ENST00000566493 RASSF10A6NK89 507 aa15.4■□□□□ 0.06
UBR1-206ENST00000566493 C6orf229H3BNL8 230 aa15.4■□□□□ 0.06
UBR1-206ENST00000566493 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
UBR1-206ENST00000566493 CCDC30Q5VVM6 783 aa15.4■□□□□ 0.06
UBR1-206ENST00000566493 ZBTB38Q8NAP3 1195 aaPredicted RBP15.4■□□□□ 0.06
UBR1-206ENST00000566493 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
UBR1-206ENST00000566493 MYD88Q99836 296 aa15.4■□□□□ 0.06
UBR1-206ENST00000566493 CDHR2Q9BYE9 1310 aa15.4■□□□□ 0.06
UBR1-206ENST00000566493 RPS8P62241 208 aaKnown RBP15.39■□□□□ 0.05
UBR1-206ENST00000566493 CCDC191Q8NCU4 936 aa15.39■□□□□ 0.05
UBR1-206ENST00000566493 EYA3Q99504 573 aa15.39■□□□□ 0.05
UBR1-206ENST00000566493 LRRC37AA6NMS7 1700 aa15.39■□□□□ 0.05
UBR1-206ENST00000566493 TRPM7Q96QT4 1865 aa15.38■□□□□ 0.05
UBR1-206ENST00000566493 H7C1D1 291 aa15.38■□□□□ 0.05
UBR1-206ENST00000566493 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
UBR1-206ENST00000566493 FOXN1O15353 648 aa15.38■□□□□ 0.05
UBR1-206ENST00000566493 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
UBR1-206ENST00000566493 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
UBR1-206ENST00000566493 WDR33Q9C0J8 1336 aaKnown RBP15.38■□□□□ 0.05
UBR1-206ENST00000566493 TRAF5O00463 557 aa15.37■□□□□ 0.05
UBR1-206ENST00000566493 ECE1P42892 770 aa15.37■□□□□ 0.05
UBR1-206ENST00000566493 CTCFP49711 727 aaPredicted RBP15.37■□□□□ 0.05
UBR1-206ENST00000566493 GPSM2P81274 684 aa15.37■□□□□ 0.05
UBR1-206ENST00000566493 CCDC152Q4G0S7 254 aa15.37■□□□□ 0.05
UBR1-206ENST00000566493 CNOT7Q9UIV1 285 aaKnown RBP15.37■□□□□ 0.05
UBR1-206ENST00000566493 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 YDJCA8MPS7 323 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 G3V3G9 751 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 PDE8AO60658 829 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
UBR1-206ENST00000566493 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
UBR1-206ENST00000566493 FMR1Q06787 632 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBR1-206ENST00000566493 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 ZC3H15Q8WU90 426 aaKnown RBP15.36■□□□□ 0.05
UBR1-206ENST00000566493 METTL22Q9BUU2 404 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms