RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 LINS1Q8NG48 757 aa17.6■□□□□ 0.41
HERPUD1-210ENST00000565966 GRAPLQ8TC17 118 aaPredicted RBP17.6■□□□□ 0.41
HERPUD1-210ENST00000565966 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
HERPUD1-210ENST00000565966 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
HERPUD1-210ENST00000565966 JARID2Q92833 1246 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-210ENST00000565966 PSMD1Q99460 953 aa17.59■□□□□ 0.41
HERPUD1-210ENST00000565966 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
HERPUD1-210ENST00000565966 SNED1Q8TER0 1413 aa17.58■□□□□ 0.41
HERPUD1-210ENST00000565966 F6X3S4 739 aa17.58■□□□□ 0.4
HERPUD1-210ENST00000565966 H7C1W4 665 aa17.58■□□□□ 0.4
HERPUD1-210ENST00000565966 GCKRQ14397 625 aa17.58■□□□□ 0.4
HERPUD1-210ENST00000565966 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
HERPUD1-210ENST00000565966 SP8Q8IXZ3 490 aa17.58■□□□□ 0.4
HERPUD1-210ENST00000565966 RARSP54136 660 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-210ENST00000565966 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
HERPUD1-210ENST00000565966 KDM2BQ8NHM5 1336 aa17.56■□□□□ 0.4
HERPUD1-210ENST00000565966 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
HERPUD1-210ENST00000565966 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
HERPUD1-210ENST00000565966 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-210ENST00000565966 PTPRCP08575 1304 aa17.55■□□□□ 0.4
HERPUD1-210ENST00000565966 GLTPD2A6NH11 291 aa17.55■□□□□ 0.4
HERPUD1-210ENST00000565966 IARSP41252 1262 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-210ENST00000565966 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
HERPUD1-210ENST00000565966 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
HERPUD1-210ENST00000565966 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-210ENST00000565966 BRPF1P55201 1214 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-210ENST00000565966 RPS8P62241 208 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-210ENST00000565966 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
HERPUD1-210ENST00000565966 LRRC37AA6NMS7 1700 aa17.54■□□□□ 0.4
HERPUD1-210ENST00000565966 CASP7P55210 303 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 CTSWP56202 376 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 MPNDQ8N594 471 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 PLA2G12BQ9BX93 195 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
HERPUD1-210ENST00000565966 KIF3CO14782 793 aa17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 ALDH1L1O75891 902 aa17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 DPP8Q6V1X1 898 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 NMRK2Q9NPI5 230 aa17.52■□□□□ 0.4
HERPUD1-210ENST00000565966 COL4A1P02462 1669 aa17.52■□□□□ 0.39
HERPUD1-210ENST00000565966 JDP2Q8WYK2 163 aa17.51■□□□□ 0.39
HERPUD1-210ENST00000565966 RRAGCQ9HB90 399 aa17.51■□□□□ 0.39
HERPUD1-210ENST00000565966 NOB1Q9ULX3 412 aaKnown RBP17.51■□□□□ 0.39
HERPUD1-210ENST00000565966 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
HERPUD1-210ENST00000565966 C1QTNF8P60827 252 aa17.5■□□□□ 0.39
HERPUD1-210ENST00000565966 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
HERPUD1-210ENST00000565966 C9orf78Q9NZ63 289 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-210ENST00000565966 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
HERPUD1-210ENST00000565966 FZD9O00144 591 aa17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 GRM8O00222 908 aa17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 BCAR3O75815 825 aa17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 CSF1RP07333 972 aa17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 ANKRD18AQ8IVF6 992 aa17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 CDC5LQ99459 802 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 GREM2Q9H772 168 aa17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
HERPUD1-210ENST00000565966 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
HERPUD1-210ENST00000565966 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
HERPUD1-210ENST00000565966 SCN4AP35499 1836 aa17.47■□□□□ 0.39
HERPUD1-210ENST00000565966 DDNO94850 711 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-210ENST00000565966 VEGFAP15692 232 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-210ENST00000565966 AOC3Q16853 763 aa17.47■□□□□ 0.39
HERPUD1-210ENST00000565966 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-210ENST00000565966 LTBP1Q14766 1721 aa17.47■□□□□ 0.39
HERPUD1-210ENST00000565966 COL4A5P29400 1685 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 TOMM70O94826 608 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 GPSM2P81274 684 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 FOXO4P98177 505 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 C16orf71Q8IYS4 520 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 ARHGAP45Q92619 1136 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 BSDC1Q9NW68 430 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.39
HERPUD1-210ENST00000565966 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 POTECB2RU33 542 aa17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 ITGA6P23229 1130 aa17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 POLLQ9UGP5 575 aa17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 UTYO14607 1347 aa17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
HERPUD1-210ENST00000565966 C6orf229H3BNL8 230 aa17.44■□□□□ 0.38
HERPUD1-210ENST00000565966 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-210ENST00000565966 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
HERPUD1-210ENST00000565966 FAM161AQ3B820 660 aa17.44■□□□□ 0.38
HERPUD1-210ENST00000565966 EYA3Q99504 573 aa17.44■□□□□ 0.38
HERPUD1-210ENST00000565966 ANKRD18BA2A2Z9 1011 aa17.43■□□□□ 0.38
HERPUD1-210ENST00000565966 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-210ENST00000565966 NBPF7P0C2Y1 421 aaPredicted RBP17.43■□□□□ 0.38
HERPUD1-210ENST00000565966 LMBR1LQ6UX01 489 aa17.43■□□□□ 0.38
HERPUD1-210ENST00000565966 GPC2Q8N158 579 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms