RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 KAZALD1Q96I82 304 aa23.69■■□□□ 1.38
CSPG4P13-201ENST00000565545 RNF181Q9P0P0 153 aa23.69■■□□□ 1.38
CSPG4P13-201ENST00000565545 KIAA1551Q9HCM1 1747 aa23.68■■□□□ 1.38
CSPG4P13-201ENST00000565545 CDHR2Q9BYE9 1310 aa23.68■■□□□ 1.38
CSPG4P13-201ENST00000565545 RABL6Q3YEC7 729 aaPredicted RBP23.68■■□□□ 1.38
CSPG4P13-201ENST00000565545 BICC1Q9H694 974 aaKnown RBP23.68■■□□□ 1.38
CSPG4P13-201ENST00000565545 USPL1Q5W0Q7 1092 aa23.67■■□□□ 1.38
CSPG4P13-201ENST00000565545 CHD1LQ86WJ1 897 aa23.67■■□□□ 1.38
CSPG4P13-201ENST00000565545 RBM46Q8TBY0 533 aaKnown RBP23.67■■□□□ 1.38
CSPG4P13-201ENST00000565545 ZBTB47Q9UFB7 747 aaPredicted RBP23.67■■□□□ 1.38
CSPG4P13-201ENST00000565545 POLRMTO00411 1230 aaKnown RBP23.66■■□□□ 1.38
CSPG4P13-201ENST00000565545 TM4SF1P30408 202 aa23.66■■□□□ 1.38
CSPG4P13-201ENST00000565545 HSP90AB4PQ58FF6 505 aa23.66■■□□□ 1.38
CSPG4P13-201ENST00000565545 ANKRD45Q5TZF3 282 aa23.66■■□□□ 1.38
CSPG4P13-201ENST00000565545 DNAJC5GQ8N7S2 189 aa23.66■■□□□ 1.38
CSPG4P13-201ENST00000565545 PLA2G12BQ9BX93 195 aa23.66■■□□□ 1.38
CSPG4P13-201ENST00000565545 GPTP24298 496 aa23.65■■□□□ 1.38
CSPG4P13-201ENST00000565545 RAB11FIP3O75154 756 aa23.64■■□□□ 1.37
CSPG4P13-201ENST00000565545 NOP58Q9Y2X3 529 aaKnown RBP23.64■■□□□ 1.37
CSPG4P13-201ENST00000565545 HSP90B1P14625 803 aaKnown RBP23.63■■□□□ 1.37
CSPG4P13-201ENST00000565545 EPHA10Q5JZY3 1008 aa23.63■■□□□ 1.37
CSPG4P13-201ENST00000565545 RRAGCQ9HB90 399 aa23.63■■□□□ 1.37
CSPG4P13-201ENST00000565545 TRMT112Q9UI30 125 aaKnown RBP23.63■■□□□ 1.37
CSPG4P13-201ENST00000565545 UBN2Q6ZU65 1347 aa23.62■■□□□ 1.37
CSPG4P13-201ENST00000565545 FOXO4P98177 505 aa23.62■■□□□ 1.37
CSPG4P13-201ENST00000565545 JARID2Q92833 1246 aaPredicted RBP23.62■■□□□ 1.37
CSPG4P13-201ENST00000565545 UTP14AQ9BVJ6 771 aaKnown RBP23.62■■□□□ 1.37
CSPG4P13-201ENST00000565545 NIP7Q9Y221 180 aaKnown RBP eCLIP23.62■■□□□ 1.37
CSPG4P13-201ENST00000565545 SURF6O75683 361 aaKnown RBP23.61■■□□□ 1.37
CSPG4P13-201ENST00000565545 FSTL1Q12841 308 aa23.61■■□□□ 1.37
CSPG4P13-201ENST00000565545 NFIXQ14938 502 aa23.61■■□□□ 1.37
CSPG4P13-201ENST00000565545 RGS3P49796 1198 aa23.6■■□□□ 1.37
CSPG4P13-201ENST00000565545 FAM89AQ96GI7 184 aa23.6■■□□□ 1.37
CSPG4P13-201ENST00000565545 BCL2L12Q9HB09 334 aa23.6■■□□□ 1.37
CSPG4P13-201ENST00000565545 MYH3P11055 1940 aa23.6■■□□□ 1.37
CSPG4P13-201ENST00000565545 SUSD4Q5VX71 490 aa23.59■■□□□ 1.37
CSPG4P13-201ENST00000565545 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
CSPG4P13-201ENST00000565545 ERC1Q8IUD2 1116 aa23.59■■□□□ 1.37
CSPG4P13-201ENST00000565545 LRRCC1Q9C099 1032 aa23.59■■□□□ 1.37
CSPG4P13-201ENST00000565545 LNPKQ9C0E8 428 aa23.59■■□□□ 1.37
CSPG4P13-201ENST00000565545 EXOC6BQ9Y2D4 811 aa23.59■■□□□ 1.37
CSPG4P13-201ENST00000565545 SH3TC1Q8TE82 1336 aa23.59■■□□□ 1.37
CSPG4P13-201ENST00000565545 SERPINB2P05120 415 aa23.58■■□□□ 1.37
CSPG4P13-201ENST00000565545 HTRA3P83110 453 aa23.58■■□□□ 1.37
CSPG4P13-201ENST00000565545 COPRSQ9NQ92 184 aa23.58■■□□□ 1.37
CSPG4P13-201ENST00000565545 IRS4O14654 1257 aaPredicted RBP23.57■■□□□ 1.36
CSPG4P13-201ENST00000565545 PDE8AO60658 829 aa23.57■■□□□ 1.36
CSPG4P13-201ENST00000565545 PDE4AP27815 886 aa23.57■■□□□ 1.36
CSPG4P13-201ENST00000565545 RTL5Q5HYW3 569 aaPredicted RBP23.57■■□□□ 1.36
CSPG4P13-201ENST00000565545 SKAP1Q86WV1 359 aa23.57■■□□□ 1.36
CSPG4P13-201ENST00000565545 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
CSPG4P13-201ENST00000565545 LAMB2P55268 1798 aa23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 NTSR2O95665 410 aa23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 CSF1RP07333 972 aa23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 RFX5P48382 616 aaPredicted RBP23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 RASSF7Q02833 373 aa23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 SETDB2Q96T68 719 aa23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 NYXQ9GZU5 481 aa23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 BRCA1P38398 1863 aaKnown RBP23.56■■□□□ 1.36
CSPG4P13-201ENST00000565545 G3BP1Q13283 466 aaKnown RBP eCLIP23.55■■□□□ 1.36
CSPG4P13-201ENST00000565545 TBC1D9BQ66K14 1250 aa23.55■■□□□ 1.36
CSPG4P13-201ENST00000565545 BICDL1Q6ZP65 573 aa23.55■■□□□ 1.36
CSPG4P13-201ENST00000565545 C2CD5Q86YS7 1000 aa23.55■■□□□ 1.36
CSPG4P13-201ENST00000565545 KLRG1Q96E93 195 aa23.55■■□□□ 1.36
CSPG4P13-201ENST00000565545 H0YIN7 160 aa23.54■■□□□ 1.36
CSPG4P13-201ENST00000565545 LMNB1P20700 586 aa23.54■■□□□ 1.36
CSPG4P13-201ENST00000565545 OS9Q13438 667 aaPredicted RBP23.54■■□□□ 1.36
CSPG4P13-201ENST00000565545 TTLL6Q8N841 843 aa23.54■■□□□ 1.36
CSPG4P13-201ENST00000565545 SMC1BQ8NDV3 1235 aa23.54■■□□□ 1.36
CSPG4P13-201ENST00000565545 RHPN1Q8TCX5 695 aa23.54■■□□□ 1.36
CSPG4P13-201ENST00000565545 ARFGEF1Q9Y6D6 1849 aa23.54■■□□□ 1.36
CSPG4P13-201ENST00000565545 FBXO3Q9UK99 471 aa23.53■■□□□ 1.36
CSPG4P13-201ENST00000565545 CHMP3Q9Y3E7 222 aa23.53■■□□□ 1.36
CSPG4P13-201ENST00000565545 APBB1O00213 710 aa23.52■■□□□ 1.36
CSPG4P13-201ENST00000565545 CTSWP56202 376 aa23.52■■□□□ 1.36
CSPG4P13-201ENST00000565545 PTPN12Q05209 780 aaKnown RBP23.52■■□□□ 1.36
CSPG4P13-201ENST00000565545 DDX60Q8IY21 1712 aaKnown RBP23.51■■□□□ 1.35
CSPG4P13-201ENST00000565545 CCDC57Q2TAC2 916 aa23.51■■□□□ 1.35
CSPG4P13-201ENST00000565545 SLC10A5Q5PT55 438 aa23.51■■□□□ 1.35
CSPG4P13-201ENST00000565545 SYNE4Q8N205 404 aa23.51■■□□□ 1.35
CSPG4P13-201ENST00000565545 TTLL11Q8NHH1 800 aa23.51■■□□□ 1.35
CSPG4P13-201ENST00000565545 PA2G4Q9UQ80 394 aaKnown RBP23.51■■□□□ 1.35
CSPG4P13-201ENST00000565545 ZC3H4Q9UPT8 1303 aaKnown RBP23.51■■□□□ 1.35
CSPG4P13-201ENST00000565545 SMARCA5O60264 1052 aaPredicted RBP23.5■■□□□ 1.35
CSPG4P13-201ENST00000565545 VEGFAP15692 232 aaPredicted RBP23.5■■□□□ 1.35
CSPG4P13-201ENST00000565545 TPTE2Q6XPS3 522 aa23.5■■□□□ 1.35
CSPG4P13-201ENST00000565545 CARMIL3Q8ND23 1372 aa23.5■■□□□ 1.35
CSPG4P13-201ENST00000565545 IFIT5Q13325 482 aaKnown RBP23.49■■□□□ 1.35
CSPG4P13-201ENST00000565545 GLTPD2A6NH11 291 aa23.48■■□□□ 1.35
CSPG4P13-201ENST00000565545 FAM177BA6PVY3 158 aa23.48■■□□□ 1.35
CSPG4P13-201ENST00000565545 CIAO1O76071 339 aa23.48■■□□□ 1.35
CSPG4P13-201ENST00000565545 NBPF5PQ86XG9 351 aaPredicted RBP23.48■■□□□ 1.35
CSPG4P13-201ENST00000565545 PLEKHM2Q8IWE5 1019 aa23.48■■□□□ 1.35
CSPG4P13-201ENST00000565545 ZNF622Q969S3 477 aaKnown RBP eCLIP23.48■■□□□ 1.35
CSPG4P13-201ENST00000565545 RTL9Q8NET4 1388 aa23.48■■□□□ 1.35
CSPG4P13-201ENST00000565545 ANKRD18BA2A2Z9 1011 aa23.47■■□□□ 1.35
CSPG4P13-201ENST00000565545 GTF2E1P29083 439 aaPredicted RBP23.47■■□□□ 1.35
CSPG4P13-201ENST00000565545 CLASRPQ8N2M8 674 aaKnown RBP23.47■■□□□ 1.35
CSPG4P13-201ENST00000565545 JMYQ8N9B5 988 aa23.47■■□□□ 1.35
CSPG4P13-201ENST00000565545 OSBPL3Q9H4L5 887 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms