RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TSR2Q969E8 191 aaKnown RBP30.77■■■□□ 2.52
RAB40C-209ENST00000565511 EPS15P42566 896 aa30.76■■■□□ 2.51
RAB40C-209ENST00000565511 TRIM28Q13263 835 aaKnown RBP30.76■■■□□ 2.51
RAB40C-209ENST00000565511 MAP1SQ66K74 1059 aaPredicted RBP30.76■■■□□ 2.51
RAB40C-209ENST00000565511 DPP8Q6V1X1 898 aaPredicted RBP30.76■■■□□ 2.51
RAB40C-209ENST00000565511 CELF1Q92879 486 aaKnown RBP30.76■■■□□ 2.51
RAB40C-209ENST00000565511 MKRN1Q9UHC7 482 aaKnown RBP30.76■■■□□ 2.51
RAB40C-209ENST00000565511 CLEC11AQ9Y240 323 aa30.76■■■□□ 2.51
RAB40C-209ENST00000565511 MPNDQ8N594 471 aa30.75■■■□□ 2.51
RAB40C-209ENST00000565511 GOLGA2Q08379 1002 aa30.74■■■□□ 2.51
RAB40C-209ENST00000565511 SF3B3Q15393 1217 aaKnown RBP30.74■■■□□ 2.51
RAB40C-209ENST00000565511 RIC3Q7Z5B4 369 aa30.74■■■□□ 2.51
RAB40C-209ENST00000565511 MYD88Q99836 296 aa30.73■■■□□ 2.51
RAB40C-209ENST00000565511 IRS4O14654 1257 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-209ENST00000565511 CXCL9Q07325 125 aa30.72■■■□□ 2.51
RAB40C-209ENST00000565511 KIAA2012Q0VF49 1180 aa30.72■■■□□ 2.51
RAB40C-209ENST00000565511 PNMA8AQ86V59 439 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-209ENST00000565511 JARID2Q92833 1246 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-209ENST00000565511 TMX4Q9H1E5 349 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-209ENST00000565511 SUPT20HQ8NEM7 779 aa30.71■■■□□ 2.51
RAB40C-209ENST00000565511 ZNRF3Q9ULT6 936 aa30.71■■■□□ 2.51
RAB40C-209ENST00000565511 HSPA1AP0DMV8 641 aaKnown RBP30.7■■■□□ 2.51
RAB40C-209ENST00000565511 HSPA1BP0DMV9 641 aaKnown RBP30.7■■■□□ 2.51
RAB40C-209ENST00000565511 FMR1Q06787 632 aaKnown RBP eCLIP30.7■■■□□ 2.51
RAB40C-209ENST00000565511 WWC1Q8IX03 1113 aa30.7■■■□□ 2.51
RAB40C-209ENST00000565511 CNTROBQ8N137 903 aa30.7■■■□□ 2.51
RAB40C-209ENST00000565511 VPS33BQ9H267 617 aa30.7■■■□□ 2.51
RAB40C-209ENST00000565511 CNTNAP1P78357 1384 aa30.69■■■□□ 2.5
RAB40C-209ENST00000565511 LMOD1P29536 600 aaPredicted RBP30.69■■■□□ 2.5
RAB40C-209ENST00000565511 COL13A1Q5TAT6 717 aaPredicted RBP30.69■■■□□ 2.5
RAB40C-209ENST00000565511 YDJCA8MPS7 323 aa30.68■■■□□ 2.5
RAB40C-209ENST00000565511 CCDC27Q2M243 656 aa30.68■■■□□ 2.5
RAB40C-209ENST00000565511 ZBTB38Q8NAP3 1195 aaPredicted RBP30.68■■■□□ 2.5
RAB40C-209ENST00000565511 CCDC30Q5VVM6 783 aa30.67■■■□□ 2.5
RAB40C-209ENST00000565511 SEC31BQ9NQW1 1179 aa30.67■■■□□ 2.5
RAB40C-209ENST00000565511 TMEM88BA6NKF7 163 aa30.66■■■□□ 2.5
RAB40C-209ENST00000565511 RAD17O75943 681 aa30.66■■■□□ 2.5
RAB40C-209ENST00000565511 GMPSP49915 693 aaPredicted RBP30.66■■■□□ 2.5
RAB40C-209ENST00000565511 GPSM2P81274 684 aa30.66■■■□□ 2.5
RAB40C-209ENST00000565511 MRS2Q9HD23 443 aa30.66■■■□□ 2.5
RAB40C-209ENST00000565511 GPRC5DQ9NZD1 345 aa30.66■■■□□ 2.5
RAB40C-209ENST00000565511 ZEB1P37275 1124 aaPredicted RBP30.65■■■□□ 2.5
RAB40C-209ENST00000565511 TMC4Q7Z404 712 aa30.65■■■□□ 2.5
RAB40C-209ENST00000565511 GPR101Q96P66 508 aaPredicted RBP30.65■■■□□ 2.5
RAB40C-209ENST00000565511 METTL22Q9BUU2 404 aaPredicted RBP30.65■■■□□ 2.5
RAB40C-209ENST00000565511 SHTN1A0MZ66 631 aa30.64■■■□□ 2.5
RAB40C-209ENST00000565511 ZNF316A6NFI3 1004 aaPredicted RBP30.64■■■□□ 2.5
RAB40C-209ENST00000565511 POLLQ9UGP5 575 aa30.64■■■□□ 2.5
RAB40C-209ENST00000565511 MAP3K2Q9Y2U5 619 aa30.64■■■□□ 2.5
RAB40C-209ENST00000565511 TRPM7Q96QT4 1865 aa30.63■■■□□ 2.49
RAB40C-209ENST00000565511 PCCAP05165 728 aaPredicted RBP30.63■■■□□ 2.49
RAB40C-209ENST00000565511 CIAPIN1Q6FI81 312 aa30.63■■■□□ 2.49
RAB40C-209ENST00000565511 G2E3Q7L622 706 aa30.63■■■□□ 2.49
RAB40C-209ENST00000565511 CCDC191Q8NCU4 936 aa30.63■■■□□ 2.49
RAB40C-209ENST00000565511 IGKV5-2P06315 115 aa30.62■■■□□ 2.49
RAB40C-209ENST00000565511 CWC25Q9NXE8 425 aaPredicted RBP30.62■■■□□ 2.49
RAB40C-209ENST00000565511 NSFL1CQ9UNZ2 370 aaKnown RBP30.62■■■□□ 2.49
RAB40C-209ENST00000565511 SCN9AQ15858 1988 aa30.62■■■□□ 2.49
RAB40C-209ENST00000565511 TRAF5O00463 557 aa30.61■■■□□ 2.49
RAB40C-209ENST00000565511 VEGFBP49765 207 aa30.61■■■□□ 2.49
RAB40C-209ENST00000565511 USP50Q70EL3 339 aaPredicted RBP30.61■■■□□ 2.49
RAB40C-209ENST00000565511 CCDC85AQ96PX6 553 aaPredicted RBP30.61■■■□□ 2.49
RAB40C-209ENST00000565511 SPEF2Q9C093 1822 aa30.61■■■□□ 2.49
RAB40C-209ENST00000565511 TWISTNBQ3B726 338 aaPredicted RBP30.6■■■□□ 2.49
RAB40C-209ENST00000565511 DBNDD1Q9H9R9 158 aa30.6■■■□□ 2.49
RAB40C-209ENST00000565511 MYH3P11055 1940 aa30.59■■■□□ 2.49
RAB40C-209ENST00000565511 PI4KAP2A4QPH2 592 aa30.59■■■□□ 2.49
RAB40C-209ENST00000565511 RIMBP2O15034 1052 aa30.59■■■□□ 2.49
RAB40C-209ENST00000565511 RPS8P62241 208 aaKnown RBP30.59■■■□□ 2.49
RAB40C-209ENST00000565511 PI4KAP1Q8N8J0 262 aa30.59■■■□□ 2.49
RAB40C-209ENST00000565511 ADARB2Q9NS39 739 aaKnown RBP30.59■■■□□ 2.49
RAB40C-209ENST00000565511 IL16Q14005 1332 aa30.58■■■□□ 2.49
RAB40C-209ENST00000565511 FANCIQ9NVI1 1328 aa30.58■■■□□ 2.49
RAB40C-209ENST00000565511 KSR2Q6VAB6 950 aa30.58■■■□□ 2.49
RAB40C-209ENST00000565511 TRPM4Q8TD43 1214 aa30.58■■■□□ 2.49
RAB40C-209ENST00000565511 SALL2Q9Y467 1007 aaPredicted RBP30.58■■■□□ 2.49
RAB40C-209ENST00000565511 DDX58O95786 925 aaKnown RBP30.57■■■□□ 2.48
RAB40C-209ENST00000565511 HIRAP54198 1017 aaPredicted RBP30.57■■■□□ 2.48
RAB40C-209ENST00000565511 WASHC4Q2M389 1173 aa30.57■■■□□ 2.48
RAB40C-209ENST00000565511 TBC1D16Q8TBP0 767 aa30.57■■■□□ 2.48
RAB40C-209ENST00000565511 KCNQ5Q9NR82 932 aa30.57■■■□□ 2.48
RAB40C-209ENST00000565511 RTL9Q8NET4 1388 aa30.56■■■□□ 2.48
RAB40C-209ENST00000565511 C6orf229H3BNL8 230 aa30.56■■■□□ 2.48
RAB40C-209ENST00000565511 ANP32CO43423 234 aa30.56■■■□□ 2.48
RAB40C-209ENST00000565511 PDE8AO60658 829 aa30.56■■■□□ 2.48
RAB40C-209ENST00000565511 ZBTB12Q9Y330 459 aaPredicted RBP30.56■■■□□ 2.48
RAB40C-209ENST00000565511 RASSF10A6NK89 507 aa30.55■■■□□ 2.48
RAB40C-209ENST00000565511 DOK7Q18PE1 504 aa30.55■■■□□ 2.48
RAB40C-209ENST00000565511 CWF19L2Q2TBE0 894 aaKnown RBP30.55■■■□□ 2.48
RAB40C-209ENST00000565511 CDHR2Q9BYE9 1310 aa30.54■■■□□ 2.48
RAB40C-209ENST00000565511 PSMD14O00487 310 aa30.54■■■□□ 2.48
RAB40C-209ENST00000565511 TNIP1Q15025 636 aa30.54■■■□□ 2.48
RAB40C-209ENST00000565511 BCL2L13Q9BXK5 485 aa30.54■■■□□ 2.48
RAB40C-209ENST00000565511 STK31Q9BXU1 1019 aa30.54■■■□□ 2.48
RAB40C-209ENST00000565511 ECE2O60344 883 aa30.53■■■□□ 2.48
RAB40C-209ENST00000565511 CCDC152Q4G0S7 254 aa30.53■■■□□ 2.48
RAB40C-209ENST00000565511 CST9Q5W186 159 aa30.53■■■□□ 2.48
RAB40C-209ENST00000565511 SPINK5Q9NQ38 1064 aaPredicted RBP30.53■■■□□ 2.48
RAB40C-209ENST00000565511 SLC4A2P04920 1241 aa30.52■■■□□ 2.48
RAB40C-209ENST00000565511 NCBP3Q53F19 620 aaKnown RBP30.52■■■□□ 2.48
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