RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ATP5J2-PTCD1G3V325 749 aa15.73■□□□□ 0.11
GTF3C1-204ENST00000564664 DDX58O95786 925 aaKnown RBP15.73■□□□□ 0.11
GTF3C1-204ENST00000564664 KIAA2012Q0VF49 1180 aa15.73■□□□□ 0.11
GTF3C1-204ENST00000564664 USP50Q70EL3 339 aaPredicted RBP15.73■□□□□ 0.11
GTF3C1-204ENST00000564664 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
GTF3C1-204ENST00000564664 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
GTF3C1-204ENST00000564664 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
GTF3C1-204ENST00000564664 IRS4O14654 1257 aaPredicted RBP15.72■□□□□ 0.11
GTF3C1-204ENST00000564664 TNIP1Q15025 636 aa15.72■□□□□ 0.11
GTF3C1-204ENST00000564664 AOC3Q16853 763 aa15.72■□□□□ 0.11
GTF3C1-204ENST00000564664 C8orf58Q8NAV2 365 aa15.72■□□□□ 0.11
GTF3C1-204ENST00000564664 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-204ENST00000564664 SCNN1DP51172 638 aa15.71■□□□□ 0.11
GTF3C1-204ENST00000564664 PHAXQ9H814 394 aaKnown RBP15.71■□□□□ 0.11
GTF3C1-204ENST00000564664 IL16Q14005 1332 aa15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 CDHR2Q9BYE9 1310 aa15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 EPS15P42566 896 aa15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 RPS8P62241 208 aaKnown RBP15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 CXCL9Q07325 125 aa15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 METTL22Q9BUU2 404 aaPredicted RBP15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 ADARB2Q9NS39 739 aaKnown RBP15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 COL4A5P29400 1685 aa15.7■□□□□ 0.1
GTF3C1-204ENST00000564664 ANP32CO43423 234 aa15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 PCCAP05165 728 aaPredicted RBP15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 WASHC4Q2M389 1173 aa15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 MAP1SQ66K74 1059 aaPredicted RBP15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 CIAPIN1Q6FI81 312 aa15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 WWC1Q8IX03 1113 aa15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 CWC25Q9NXE8 425 aaPredicted RBP15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 GPRC5DQ9NZD1 345 aa15.69■□□□□ 0.1
GTF3C1-204ENST00000564664 PCNTO95613 3336 aa15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 LAMB2P55268 1798 aa15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 ADAMTSL1Q8N6G6 1762 aa15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 CNTNAP1P78357 1384 aa15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 EYA3Q99504 573 aa15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 MYD88Q99836 296 aa15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 STK31Q9BXU1 1019 aa15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 NSFL1CQ9UNZ2 370 aaKnown RBP15.68■□□□□ 0.1
GTF3C1-204ENST00000564664 ZNF316A6NFI3 1004 aaPredicted RBP15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 PDE8AO60658 829 aa15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 CCDC152Q4G0S7 254 aa15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 CCDC184Q52MB2 194 aa15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 KSR2Q6VAB6 950 aa15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 ZC3H15Q8WU90 426 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 MKRN1Q9UHC7 482 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-204ENST00000564664 HSPA1AP0DMV8 641 aaKnown RBP15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 HSPA1BP0DMV9 641 aaKnown RBP15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 DEFB115Q30KQ5 88 aa15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 SLC51AQ86UW1 340 aa15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 TSPYL6Q8N831 410 aa15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 DPF2Q92785 391 aa15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 PODXL2Q9NZ53 605 aa15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
GTF3C1-204ENST00000564664 RASSF10A6NK89 507 aa15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 GMPSP49915 693 aaPredicted RBP15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 NEXNQ0ZGT2 675 aa15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 TWISTNBQ3B726 338 aaPredicted RBP15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 WDR63Q8IWG1 891 aa15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 MRS2Q9HD23 443 aa15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 DDX60Q8IY21 1712 aaKnown RBP15.65■□□□□ 0.1
GTF3C1-204ENST00000564664 PI4KAP2A4QPH2 592 aa15.64■□□□□ 0.09
GTF3C1-204ENST00000564664 H7C1D1 291 aa15.64■□□□□ 0.09
GTF3C1-204ENST00000564664 RAD17O75943 681 aa15.64■□□□□ 0.09
GTF3C1-204ENST00000564664 GPSM2P81274 684 aa15.64■□□□□ 0.09
GTF3C1-204ENST00000564664 PI4KAP1Q8N8J0 262 aa15.64■□□□□ 0.09
GTF3C1-204ENST00000564664 ZC3H12CQ9C0D7 883 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-204ENST00000564664 POLLQ9UGP5 575 aa15.64■□□□□ 0.09
GTF3C1-204ENST00000564664 YDJCA8MPS7 323 aa15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 RPS12P25398 132 aaKnown RBP15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 VEGFBP49765 207 aa15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 COL13A1Q5TAT6 717 aaPredicted RBP15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 TBC1D16Q8TBP0 767 aa15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 CNOT7Q9UIV1 285 aaKnown RBP15.63■□□□□ 0.09
GTF3C1-204ENST00000564664 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
GTF3C1-204ENST00000564664 ABT1Q9ULW3 272 aaKnown RBP15.62■□□□□ 0.09
GTF3C1-204ENST00000564664 TAF1P21675 1872 aa15.62■□□□□ 0.09
GTF3C1-204ENST00000564664 LRRC37AA6NMS7 1700 aa15.62■□□□□ 0.09
GTF3C1-204ENST00000564664 LTBP1Q14766 1721 aa15.62■□□□□ 0.09
GTF3C1-204ENST00000564664 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
GTF3C1-204ENST00000564664 AIDAQ96BJ3 306 aa15.61■□□□□ 0.09
GTF3C1-204ENST00000564664 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
GTF3C1-204ENST00000564664 SEC31BQ9NQW1 1179 aa15.61■□□□□ 0.09
GTF3C1-204ENST00000564664 ANKIB1Q9P2G1 1089 aa15.61■□□□□ 0.09
GTF3C1-204ENST00000564664 GGA1Q9UJY5 639 aa15.61■□□□□ 0.09
GTF3C1-204ENST00000564664 G3V3G9 751 aa15.6■□□□□ 0.09
GTF3C1-204ENST00000564664 H7C1W4 665 aa15.6■□□□□ 0.09
GTF3C1-204ENST00000564664 PSMD14O00487 310 aa15.6■□□□□ 0.09
GTF3C1-204ENST00000564664 RIMBP2O15034 1052 aa15.6■□□□□ 0.09
GTF3C1-204ENST00000564664 ECE1P42892 770 aa15.6■□□□□ 0.09
GTF3C1-204ENST00000564664 MAP2K1Q02750 393 aaPredicted RBP15.6■□□□□ 0.09
GTF3C1-204ENST00000564664 DCAF8Q5TAQ9 597 aa15.6■□□□□ 0.09
GTF3C1-204ENST00000564664 CDC37L1Q7L3B6 337 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms