RNA–Protein interactions for RNA: ENST00000563875.1

SNUPN-203, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-203ENST00000563875 DDX46Q7L014 1031 aaKnown RBP14.46□□□□□ -0.09
SNUPN-203ENST00000563875 GRAPLQ8TC17 118 aaPredicted RBP14.46□□□□□ -0.09
SNUPN-203ENST00000563875 CDHR2Q9BYE9 1310 aa14.45□□□□□ -0.1
SNUPN-203ENST00000563875 BBOX1O75936 387 aa14.45□□□□□ -0.1
SNUPN-203ENST00000563875 FKBP5Q13451 457 aaPredicted RBP14.45□□□□□ -0.1
SNUPN-203ENST00000563875 GRIPAP1Q4V328 841 aa14.45□□□□□ -0.1
SNUPN-203ENST00000563875 TRMT2AQ8IZ69 625 aaKnown RBP14.45□□□□□ -0.1
SNUPN-203ENST00000563875 CDCA7LQ96GN5 454 aa14.45□□□□□ -0.1
SNUPN-203ENST00000563875 IARSP41252 1262 aaKnown RBP14.44□□□□□ -0.1
SNUPN-203ENST00000563875 NEXNQ0ZGT2 675 aa14.44□□□□□ -0.1
SNUPN-203ENST00000563875 DNAAF4Q8WXU2 420 aa14.44□□□□□ -0.1
SNUPN-203ENST00000563875 JARID2Q92833 1246 aaPredicted RBP14.44□□□□□ -0.1
SNUPN-203ENST00000563875 CELF1Q92879 486 aaKnown RBP14.44□□□□□ -0.1
SNUPN-203ENST00000563875 PDE8AO60658 829 aa14.43□□□□□ -0.1
SNUPN-203ENST00000563875 SP8Q8IXZ3 490 aa14.43□□□□□ -0.1
SNUPN-203ENST00000563875 RTFDC1Q9BY42 306 aaPredicted RBP14.43□□□□□ -0.1
SNUPN-203ENST00000563875 RRAGCQ9HB90 399 aa14.43□□□□□ -0.1
SNUPN-203ENST00000563875 SPEF2Q9C093 1822 aa14.43□□□□□ -0.1
SNUPN-203ENST00000563875 ZNF541Q9H0D2 1346 aa14.42□□□□□ -0.1
SNUPN-203ENST00000563875 POTECB2RU33 542 aa14.42□□□□□ -0.1
SNUPN-203ENST00000563875 F6X3S4 739 aa14.42□□□□□ -0.1
SNUPN-203ENST00000563875 HSP90B1P14625 803 aaKnown RBP14.42□□□□□ -0.1
SNUPN-203ENST00000563875 CASP7P55210 303 aa14.42□□□□□ -0.1
SNUPN-203ENST00000563875 GCKRQ14397 625 aa14.42□□□□□ -0.1
SNUPN-203ENST00000563875 TMC4Q7Z404 712 aa14.42□□□□□ -0.1
SNUPN-203ENST00000563875 LINS1Q8NG48 757 aa14.42□□□□□ -0.1
SNUPN-203ENST00000563875 SCN4AP35499 1836 aa14.41□□□□□ -0.1
SNUPN-203ENST00000563875 H7C1W4 665 aa14.41□□□□□ -0.1
SNUPN-203ENST00000563875 FZD9O00144 591 aa14.41□□□□□ -0.1
SNUPN-203ENST00000563875 TOMM70O94826 608 aa14.41□□□□□ -0.1
SNUPN-203ENST00000563875 CTSWP56202 376 aa14.41□□□□□ -0.1
SNUPN-203ENST00000563875 SEC31BQ9NQW1 1179 aa14.41□□□□□ -0.1
SNUPN-203ENST00000563875 RTL9Q8NET4 1388 aa14.4□□□□□ -0.1
SNUPN-203ENST00000563875 DDNO94850 711 aaPredicted RBP14.4□□□□□ -0.1
SNUPN-203ENST00000563875 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
SNUPN-203ENST00000563875 BEND3Q5T5X7 828 aa14.4□□□□□ -0.1
SNUPN-203ENST00000563875 DPY19L2Q6NUT2 758 aa14.4□□□□□ -0.1
SNUPN-203ENST00000563875 UBE3BQ7Z3V4 1068 aa14.4□□□□□ -0.1
SNUPN-203ENST00000563875 MRPL50Q8N5N7 158 aaKnown RBP14.4□□□□□ -0.1
SNUPN-203ENST00000563875 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
SNUPN-203ENST00000563875 DPP8Q6V1X1 898 aaPredicted RBP14.39□□□□□ -0.11
SNUPN-203ENST00000563875 MPNDQ8N594 471 aa14.39□□□□□ -0.11
SNUPN-203ENST00000563875 TTLL11Q8NHH1 800 aa14.39□□□□□ -0.11
SNUPN-203ENST00000563875 RBM46Q8TBY0 533 aaKnown RBP14.39□□□□□ -0.11
SNUPN-203ENST00000563875 SSH1Q8WYL5 1049 aa14.39□□□□□ -0.11
SNUPN-203ENST00000563875 L3MBTL3Q96JM7 780 aaPredicted RBP14.39□□□□□ -0.11
SNUPN-203ENST00000563875 PLA2G12BQ9BX93 195 aa14.39□□□□□ -0.11
SNUPN-203ENST00000563875 RPS8P62241 208 aaKnown RBP14.38□□□□□ -0.11
SNUPN-203ENST00000563875 AOC3Q16853 763 aa14.38□□□□□ -0.11
SNUPN-203ENST00000563875 LARGE2Q8N3Y3 721 aa14.38□□□□□ -0.11
SNUPN-203ENST00000563875 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
SNUPN-203ENST00000563875 TMX4Q9H1E5 349 aaPredicted RBP14.38□□□□□ -0.11
SNUPN-203ENST00000563875 VPS33BQ9H267 617 aa14.38□□□□□ -0.11
SNUPN-203ENST00000563875 PPIP5K2O43314 1243 aa14.37□□□□□ -0.11
SNUPN-203ENST00000563875 KIAA2012Q0VF49 1180 aa14.37□□□□□ -0.11
SNUPN-203ENST00000563875 SUPT20HQ8NEM7 779 aa14.37□□□□□ -0.11
SNUPN-203ENST00000563875 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
SNUPN-203ENST00000563875 GREM2Q9H772 168 aa14.37□□□□□ -0.11
SNUPN-203ENST00000563875 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
SNUPN-203ENST00000563875 GPSM2P81274 684 aa14.36□□□□□ -0.11
SNUPN-203ENST00000563875 ALDH1L2Q3SY69 923 aa14.36□□□□□ -0.11
SNUPN-203ENST00000563875 C16orf71Q8IYS4 520 aaPredicted RBP14.36□□□□□ -0.11
SNUPN-203ENST00000563875 BCL2L13Q9BXK5 485 aa14.36□□□□□ -0.11
SNUPN-203ENST00000563875 A0A1B0GUL6 1792 aa14.36□□□□□ -0.11
SNUPN-203ENST00000563875 PTPRCP08575 1304 aa14.36□□□□□ -0.11
SNUPN-203ENST00000563875 CSF1RP07333 972 aa14.35□□□□□ -0.11
SNUPN-203ENST00000563875 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
SNUPN-203ENST00000563875 HSPA6P17066 643 aa14.35□□□□□ -0.11
SNUPN-203ENST00000563875 NIM1KQ8IY84 436 aa14.35□□□□□ -0.11
SNUPN-203ENST00000563875 GPC2Q8N158 579 aa14.35□□□□□ -0.11
SNUPN-203ENST00000563875 PODXL2Q9NZ53 605 aa14.35□□□□□ -0.11
SNUPN-203ENST00000563875 POLLQ9UGP5 575 aa14.35□□□□□ -0.11
SNUPN-203ENST00000563875 GRM8O00222 908 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 ALDH1L1O75891 902 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 FOXO4P98177 505 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 FSTL1Q12841 308 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 ANKRD18AQ8IVF6 992 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 CDC5LQ99459 802 aaKnown RBP14.34□□□□□ -0.11
SNUPN-203ENST00000563875 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
SNUPN-203ENST00000563875 SCN9AQ15858 1988 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 PCNTO95613 3336 aa14.34□□□□□ -0.11
SNUPN-203ENST00000563875 IQCA1LA6NCM1 817 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 POTEJP0CG39 1038 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
SNUPN-203ENST00000563875 TBC1D16Q8TBP0 767 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 SRCIN1Q9C0H9 1055 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 TAF1DQ9H5J8 278 aaPredicted RBP14.33□□□□□ -0.12
SNUPN-203ENST00000563875 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 ZNRF3Q9ULT6 936 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 PSME4Q14997 1843 aa14.33□□□□□ -0.12
SNUPN-203ENST00000563875 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
SNUPN-203ENST00000563875 ITGA6P23229 1130 aa14.32□□□□□ -0.12
SNUPN-203ENST00000563875 SCNN1DP51172 638 aa14.32□□□□□ -0.12
SNUPN-203ENST00000563875 BRPF1P55201 1214 aaPredicted RBP14.32□□□□□ -0.12
SNUPN-203ENST00000563875 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNUPN-203ENST00000563875 EPHA10Q5JZY3 1008 aa14.32□□□□□ -0.12
SNUPN-203ENST00000563875 SMC1BQ8NDV3 1235 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms