RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 SLC51AQ86UW1 340 aa25.81■■□□□ 1.72
CMTM3-206ENST00000563672 ZC3H4Q9UPT8 1303 aaKnown RBP25.81■■□□□ 1.72
CMTM3-206ENST00000563672 PSMD1Q99460 953 aa25.8■■□□□ 1.72
CMTM3-206ENST00000563672 BCL2L13Q9BXK5 485 aa25.8■■□□□ 1.72
CMTM3-206ENST00000563672 CASP7P55210 303 aa25.79■■□□□ 1.72
CMTM3-206ENST00000563672 UBE3BQ7Z3V4 1068 aa25.79■■□□□ 1.72
CMTM3-206ENST00000563672 SP8Q8IXZ3 490 aa25.79■■□□□ 1.72
CMTM3-206ENST00000563672 PTPRCP08575 1304 aa25.79■■□□□ 1.72
CMTM3-206ENST00000563672 ZNF526Q8TF50 670 aaPredicted RBP25.78■■□□□ 1.72
CMTM3-206ENST00000563672 CELF1Q92879 486 aaKnown RBP25.78■■□□□ 1.72
CMTM3-206ENST00000563672 GPBP1L1Q9HC44 474 aaPredicted RBP25.78■■□□□ 1.72
CMTM3-206ENST00000563672 CCDC152Q4G0S7 254 aa25.77■■□□□ 1.72
CMTM3-206ENST00000563672 TMC4Q7Z404 712 aa25.77■■□□□ 1.72
CMTM3-206ENST00000563672 ZNF277Q9NRM2 450 aaPredicted RBP25.77■■□□□ 1.72
CMTM3-206ENST00000563672 SMC4Q9NTJ3 1288 aa25.77■■□□□ 1.72
CMTM3-206ENST00000563672 BRPF1P55201 1214 aaPredicted RBP25.76■■□□□ 1.71
CMTM3-206ENST00000563672 CTSWP56202 376 aa25.76■■□□□ 1.71
CMTM3-206ENST00000563672 PLA2G12BQ9BX93 195 aa25.76■■□□□ 1.71
CMTM3-206ENST00000563672 TMX4Q9H1E5 349 aaPredicted RBP25.76■■□□□ 1.71
CMTM3-206ENST00000563672 SEC31BQ9NQW1 1179 aa25.76■■□□□ 1.71
CMTM3-206ENST00000563672 ZBED9Q6R2W3 1325 aa25.76■■□□□ 1.71
CMTM3-206ENST00000563672 ALDH1L1O75891 902 aa25.75■■□□□ 1.71
CMTM3-206ENST00000563672 RPS8P62241 208 aaKnown RBP25.75■■□□□ 1.71
CMTM3-206ENST00000563672 SLC4A10Q6U841 1118 aa25.75■■□□□ 1.71
CMTM3-206ENST00000563672 TTLL11Q8NHH1 800 aa25.75■■□□□ 1.71
CMTM3-206ENST00000563672 RARSP54136 660 aaKnown RBP25.74■■□□□ 1.71
CMTM3-206ENST00000563672 SRCIN1Q9C0H9 1055 aa25.74■■□□□ 1.71
CMTM3-206ENST00000563672 IARSP41252 1262 aaKnown RBP25.73■■□□□ 1.71
CMTM3-206ENST00000563672 CCDC85AQ96PX6 553 aaPredicted RBP25.73■■□□□ 1.71
CMTM3-206ENST00000563672 COL4A1P02462 1669 aa25.72■■□□□ 1.71
CMTM3-206ENST00000563672 RTFDC1Q9BY42 306 aaPredicted RBP25.72■■□□□ 1.71
CMTM3-206ENST00000563672 KDM2BQ8NHM5 1336 aa25.71■■□□□ 1.71
CMTM3-206ENST00000563672 TAF1P21675 1872 aa25.71■■□□□ 1.71
CMTM3-206ENST00000563672 CCDC88AQ3V6T2 1871 aa25.71■■□□□ 1.71
CMTM3-206ENST00000563672 GLTPD2A6NH11 291 aa25.71■■□□□ 1.71
CMTM3-206ENST00000563672 GRM8O00222 908 aa25.71■■□□□ 1.71
CMTM3-206ENST00000563672 CSF1RP07333 972 aa25.71■■□□□ 1.71
CMTM3-206ENST00000563672 MPNDQ8N594 471 aa25.71■■□□□ 1.71
CMTM3-206ENST00000563672 RTL9Q8NET4 1388 aa25.7■■□□□ 1.71
CMTM3-206ENST00000563672 DPP8Q6V1X1 898 aaPredicted RBP25.7■■□□□ 1.7
CMTM3-206ENST00000563672 GREM2Q9H772 168 aa25.7■■□□□ 1.7
CMTM3-206ENST00000563672 DICER1Q9UPY3 1922 aaKnown RBP25.69■■□□□ 1.7
CMTM3-206ENST00000563672 NMRK2Q9NPI5 230 aa25.69■■□□□ 1.7
CMTM3-206ENST00000563672 NOB1Q9ULX3 412 aaKnown RBP25.69■■□□□ 1.7
CMTM3-206ENST00000563672 KIF3CO14782 793 aa25.68■■□□□ 1.7
CMTM3-206ENST00000563672 SUPT20HQ8NEM7 779 aa25.68■■□□□ 1.7
CMTM3-206ENST00000563672 VPS33BQ9H267 617 aa25.68■■□□□ 1.7
CMTM3-206ENST00000563672 C9orf78Q9NZ63 289 aaPredicted RBP25.68■■□□□ 1.7
CMTM3-206ENST00000563672 FOXO4P98177 505 aa25.67■■□□□ 1.7
CMTM3-206ENST00000563672 DPY19L2Q6NUT2 758 aa25.67■■□□□ 1.7
CMTM3-206ENST00000563672 TIAM2Q8IVF5 1701 aa25.67■■□□□ 1.7
CMTM3-206ENST00000563672 ANKRD18AQ8IVF6 992 aa25.67■■□□□ 1.7
CMTM3-206ENST00000563672 CDC5LQ99459 802 aaKnown RBP25.67■■□□□ 1.7
CMTM3-206ENST00000563672 UTYO14607 1347 aa25.66■■□□□ 1.7
CMTM3-206ENST00000563672 FZD9O00144 591 aa25.66■■□□□ 1.7
CMTM3-206ENST00000563672 LRRC37AA6NMS7 1700 aa25.66■■□□□ 1.7
CMTM3-206ENST00000563672 GPSM2P81274 684 aa25.65■■□□□ 1.7
CMTM3-206ENST00000563672 LARGE2Q8N3Y3 721 aa25.65■■□□□ 1.7
CMTM3-206ENST00000563672 JDP2Q8WYK2 163 aa25.65■■□□□ 1.7
CMTM3-206ENST00000563672 NSFL1CQ9UNZ2 370 aaKnown RBP25.65■■□□□ 1.7
CMTM3-206ENST00000563672 NBPF7P0C2Y1 421 aaPredicted RBP25.64■■□□□ 1.7
CMTM3-206ENST00000563672 EPHA10Q5JZY3 1008 aa25.64■■□□□ 1.7
CMTM3-206ENST00000563672 ARHGAP45Q92619 1136 aa25.64■■□□□ 1.7
CMTM3-206ENST00000563672 API5Q9BZZ5 524 aaKnown RBP25.64■■□□□ 1.7
CMTM3-206ENST00000563672 RRAGCQ9HB90 399 aa25.64■■□□□ 1.7
CMTM3-206ENST00000563672 COL4A5P29400 1685 aa25.64■■□□□ 1.69
CMTM3-206ENST00000563672 KIF16BQ96L93 1317 aa25.63■■□□□ 1.69
CMTM3-206ENST00000563672 PPIP5K2O43314 1243 aa25.63■■□□□ 1.69
CMTM3-206ENST00000563672 ITGA6P23229 1130 aa25.63■■□□□ 1.69
CMTM3-206ENST00000563672 AOC3Q16853 763 aa25.63■■□□□ 1.69
CMTM3-206ENST00000563672 FAM161AQ3B820 660 aa25.63■■□□□ 1.69
CMTM3-206ENST00000563672 BSDC1Q9NW68 430 aaPredicted RBP25.63■■□□□ 1.69
CMTM3-206ENST00000563672 PODXL2Q9NZ53 605 aa25.63■■□□□ 1.69
CMTM3-206ENST00000563672 DUOX1Q9NRD9 1551 aa25.62■■□□□ 1.69
CMTM3-206ENST00000563672 BCAR3O75815 825 aa25.62■■□□□ 1.69
CMTM3-206ENST00000563672 DDNO94850 711 aaPredicted RBP25.62■■□□□ 1.69
CMTM3-206ENST00000563672 KIAA2012Q0VF49 1180 aa25.62■■□□□ 1.69
CMTM3-206ENST00000563672 ZNF541Q9H0D2 1346 aa25.62■■□□□ 1.69
CMTM3-206ENST00000563672 MYH3P11055 1940 aa25.61■■□□□ 1.69
CMTM3-206ENST00000563672 LMBR1LQ6UX01 489 aa25.61■■□□□ 1.69
CMTM3-206ENST00000563672 KAZALD1Q96I82 304 aa25.61■■□□□ 1.69
CMTM3-206ENST00000563672 USP44Q9H0E7 712 aa25.61■■□□□ 1.69
CMTM3-206ENST00000563672 POLLQ9UGP5 575 aa25.61■■□□□ 1.69
CMTM3-206ENST00000563672 POTECB2RU33 542 aa25.6■■□□□ 1.69
CMTM3-206ENST00000563672 CCT4P50991 539 aaKnown RBP25.6■■□□□ 1.69
CMTM3-206ENST00000563672 C1QTNF8P60827 252 aa25.6■■□□□ 1.69
CMTM3-206ENST00000563672 TBC1D16Q8TBP0 767 aa25.6■■□□□ 1.69
CMTM3-206ENST00000563672 SUCLG2Q96I99 432 aa25.6■■□□□ 1.69
CMTM3-206ENST00000563672 IGHMBP2P38935 993 aaKnown RBP25.59■■□□□ 1.69
CMTM3-206ENST00000563672 NIM1KQ8IY84 436 aa25.59■■□□□ 1.69
CMTM3-206ENST00000563672 MINPP1Q9UNW1 487 aa25.59■■□□□ 1.69
CMTM3-206ENST00000563672 ANKRD18BA2A2Z9 1011 aa25.58■■□□□ 1.69
CMTM3-206ENST00000563672 VEGFAP15692 232 aaPredicted RBP25.58■■□□□ 1.69
CMTM3-206ENST00000563672 ANKIB1Q9P2G1 1089 aa25.58■■□□□ 1.69
CMTM3-206ENST00000563672 C6orf229H3BNL8 230 aa25.57■■□□□ 1.68
CMTM3-206ENST00000563672 IPO8O15397 1037 aaKnown RBP25.57■■□□□ 1.68
CMTM3-206ENST00000563672 EIF6P56537 245 aaKnown RBP25.57■■□□□ 1.68
CMTM3-206ENST00000563672 IFIT5Q13325 482 aaKnown RBP25.57■■□□□ 1.68
CMTM3-206ENST00000563672 WASHC4Q2M389 1173 aa25.57■■□□□ 1.68
CMTM3-206ENST00000563672 L3MBTL3Q96JM7 780 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms