RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 VPS33BQ9H267 617 aa18.09■□□□□ 0.49
SMPD3-204ENST00000563396 CDHR2Q9BYE9 1310 aa18.08■□□□□ 0.49
SMPD3-204ENST00000563396 SPEF2Q9C093 1822 aa18.08■□□□□ 0.48
SMPD3-204ENST00000563396 IQCA1LA6NCM1 817 aa18.08■□□□□ 0.48
SMPD3-204ENST00000563396 IRS4O14654 1257 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-204ENST00000563396 KSR2Q6VAB6 950 aa18.08■□□□□ 0.48
SMPD3-204ENST00000563396 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-204ENST00000563396 CWC25Q9NXE8 425 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-204ENST00000563396 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
SMPD3-204ENST00000563396 PI4KAP2A4QPH2 592 aa18.07■□□□□ 0.48
SMPD3-204ENST00000563396 IGKV5-2P06315 115 aa18.07■□□□□ 0.48
SMPD3-204ENST00000563396 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
SMPD3-204ENST00000563396 GPC2Q8N158 579 aa18.07■□□□□ 0.48
SMPD3-204ENST00000563396 PI4KAP1Q8N8J0 262 aa18.07■□□□□ 0.48
SMPD3-204ENST00000563396 JDP2Q8WYK2 163 aa18.07■□□□□ 0.48
SMPD3-204ENST00000563396 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
SMPD3-204ENST00000563396 VAMP4O75379 141 aa18.06■□□□□ 0.48
SMPD3-204ENST00000563396 FLIIQ13045 1269 aa18.06■□□□□ 0.48
SMPD3-204ENST00000563396 G2E3Q7L622 706 aa18.06■□□□□ 0.48
SMPD3-204ENST00000563396 SUPT20HQ8NEM7 779 aa18.06■□□□□ 0.48
SMPD3-204ENST00000563396 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-204ENST00000563396 PSME4Q14997 1843 aa18.05■□□□□ 0.48
SMPD3-204ENST00000563396 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
SMPD3-204ENST00000563396 EXOSC9Q06265 439 aaKnown RBP18.05■□□□□ 0.48
SMPD3-204ENST00000563396 LARGE2Q8N3Y3 721 aa18.05■□□□□ 0.48
SMPD3-204ENST00000563396 CELF1Q92879 486 aaKnown RBP18.05■□□□□ 0.48
SMPD3-204ENST00000563396 MYH16Q9H6N6 1097 aa18.05■□□□□ 0.48
SMPD3-204ENST00000563396 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-204ENST00000563396 PPIP5K2O43314 1243 aa18.04■□□□□ 0.48
SMPD3-204ENST00000563396 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
SMPD3-204ENST00000563396 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
SMPD3-204ENST00000563396 DPP8Q6V1X1 898 aaPredicted RBP18.04■□□□□ 0.48
SMPD3-204ENST00000563396 MPNDQ8N594 471 aa18.04■□□□□ 0.48
SMPD3-204ENST00000563396 TAF1DQ9H5J8 278 aaPredicted RBP18.04■□□□□ 0.48
SMPD3-204ENST00000563396 A0A1B0GUL6 1792 aa18.04■□□□□ 0.48
SMPD3-204ENST00000563396 RTL9Q8NET4 1388 aa18.04■□□□□ 0.48
SMPD3-204ENST00000563396 NEURL1BA8MQ27 555 aa18.03■□□□□ 0.48
SMPD3-204ENST00000563396 PDE8AO60658 829 aa18.03■□□□□ 0.48
SMPD3-204ENST00000563396 EIF6P56537 245 aaKnown RBP18.03■□□□□ 0.48
SMPD3-204ENST00000563396 KIAA2012Q0VF49 1180 aa18.03■□□□□ 0.48
SMPD3-204ENST00000563396 NEXNQ0ZGT2 675 aa18.03■□□□□ 0.48
SMPD3-204ENST00000563396 AOC3Q16853 763 aa18.03■□□□□ 0.48
SMPD3-204ENST00000563396 NIM1KQ8IY84 436 aa18.03■□□□□ 0.48
SMPD3-204ENST00000563396 LDHDQ86WU2 507 aa18.02■□□□□ 0.48
SMPD3-204ENST00000563396 HACL1Q9UJ83 578 aa18.02■□□□□ 0.48
SMPD3-204ENST00000563396 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
SMPD3-204ENST00000563396 POTEJP0CG39 1038 aa18.01■□□□□ 0.47
SMPD3-204ENST00000563396 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
SMPD3-204ENST00000563396 CCDC152Q4G0S7 254 aa18.01■□□□□ 0.47
SMPD3-204ENST00000563396 CHADLQ6NUI6 762 aa18.01■□□□□ 0.47
SMPD3-204ENST00000563396 DNAJC5GQ8N7S2 189 aa18.01■□□□□ 0.47
SMPD3-204ENST00000563396 ZNF646O15015 1829 aaPredicted RBP18■□□□□ 0.47
SMPD3-204ENST00000563396 SCNN1DP51172 638 aa18■□□□□ 0.47
SMPD3-204ENST00000563396 CTSWP56202 376 aa18■□□□□ 0.47
SMPD3-204ENST00000563396 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
SMPD3-204ENST00000563396 DNAAF4Q8WXU2 420 aa18■□□□□ 0.47
SMPD3-204ENST00000563396 SCN9AQ15858 1988 aa17.99■□□□□ 0.47
SMPD3-204ENST00000563396 EPHX2P34913 555 aa17.99■□□□□ 0.47
SMPD3-204ENST00000563396 RPS8P62241 208 aaKnown RBP17.99■□□□□ 0.47
SMPD3-204ENST00000563396 LINS1Q8NG48 757 aa17.99■□□□□ 0.47
SMPD3-204ENST00000563396 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
SMPD3-204ENST00000563396 PODXL2Q9NZ53 605 aa17.99■□□□□ 0.47
SMPD3-204ENST00000563396 ZNRF3Q9ULT6 936 aa17.99■□□□□ 0.47
SMPD3-204ENST00000563396 H7C1W4 665 aa17.98■□□□□ 0.47
SMPD3-204ENST00000563396 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
SMPD3-204ENST00000563396 CASP7P55210 303 aa17.98■□□□□ 0.47
SMPD3-204ENST00000563396 PLA2G12BQ9BX93 195 aa17.98■□□□□ 0.47
SMPD3-204ENST00000563396 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
SMPD3-204ENST00000563396 GPSM2P81274 684 aa17.97■□□□□ 0.47
SMPD3-204ENST00000563396 GCKRQ14397 625 aa17.97■□□□□ 0.47
SMPD3-204ENST00000563396 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-204ENST00000563396 JARID2Q92833 1246 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-204ENST00000563396 ZNF609O15014 1411 aa17.97■□□□□ 0.47
SMPD3-204ENST00000563396 HTRA3P83110 453 aa17.96■□□□□ 0.47
SMPD3-204ENST00000563396 CXCL9Q07325 125 aa17.96■□□□□ 0.47
SMPD3-204ENST00000563396 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
SMPD3-204ENST00000563396 TTLL11Q8NHH1 800 aa17.96■□□□□ 0.47
SMPD3-204ENST00000563396 POLLQ9UGP5 575 aa17.96■□□□□ 0.47
SMPD3-204ENST00000563396 GJA3Q9Y6H8 435 aa17.96■□□□□ 0.47
SMPD3-204ENST00000563396 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
SMPD3-204ENST00000563396 YDJCA8MPS7 323 aa17.95■□□□□ 0.46
SMPD3-204ENST00000563396 E9PSI1 815 aa17.95■□□□□ 0.46
SMPD3-204ENST00000563396 LMOD1P29536 600 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-204ENST00000563396 TBC1D16Q8TBP0 767 aa17.95■□□□□ 0.46
SMPD3-204ENST00000563396 KLRG1Q96E93 195 aa17.95■□□□□ 0.46
SMPD3-204ENST00000563396 NSFL1CQ9UNZ2 370 aaKnown RBP17.95■□□□□ 0.46
SMPD3-204ENST00000563396 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
SMPD3-204ENST00000563396 BEND3Q5T5X7 828 aa17.94■□□□□ 0.46
SMPD3-204ENST00000563396 CIAPIN1Q6FI81 312 aa17.94■□□□□ 0.46
SMPD3-204ENST00000563396 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
SMPD3-204ENST00000563396 GREM2Q9H772 168 aa17.94■□□□□ 0.46
SMPD3-204ENST00000563396 GPRC5DQ9NZD1 345 aa17.94■□□□□ 0.46
SMPD3-204ENST00000563396 ITGBL1O95965 494 aaPredicted RBP17.93■□□□□ 0.46
SMPD3-204ENST00000563396 EAPPQ56P03 285 aaPredicted RBP17.93■□□□□ 0.46
SMPD3-204ENST00000563396 ANKRD18AQ8IVF6 992 aa17.93■□□□□ 0.46
SMPD3-204ENST00000563396 JMYQ8N9B5 988 aa17.93■□□□□ 0.46
SMPD3-204ENST00000563396 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
SMPD3-204ENST00000563396 EYA3Q99504 573 aa17.93■□□□□ 0.46
SMPD3-204ENST00000563396 XDHP47989 1333 aa17.93■□□□□ 0.46
SMPD3-204ENST00000563396 THSD7BQ9C0I4 1608 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms