RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 ISCA1Q9BUE6 129 aa22.43■■□□□ 1.18
TSC2-219ENST00000563346 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
TSC2-219ENST00000563346 RTFDC1Q9BY42 306 aaPredicted RBP22.42■■□□□ 1.18
TSC2-219ENST00000563346 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
TSC2-219ENST00000563346 SCNN1DP51172 638 aa22.41■■□□□ 1.18
TSC2-219ENST00000563346 GOLGA2Q08379 1002 aa22.41■■□□□ 1.18
TSC2-219ENST00000563346 TMC4Q7Z404 712 aa22.41■■□□□ 1.18
TSC2-219ENST00000563346 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
TSC2-219ENST00000563346 FAM89AQ96GI7 184 aa22.41■■□□□ 1.18
TSC2-219ENST00000563346 ZNRF3Q9ULT6 936 aa22.41■■□□□ 1.18
TSC2-219ENST00000563346 LTBP1Q14766 1721 aa22.4■■□□□ 1.18
TSC2-219ENST00000563346 DDX60Q8IY21 1712 aaKnown RBP22.4■■□□□ 1.18
TSC2-219ENST00000563346 CNTNAP1P78357 1384 aa22.4■■□□□ 1.18
TSC2-219ENST00000563346 FOXN1O15353 648 aa22.4■■□□□ 1.18
TSC2-219ENST00000563346 EPS15P42566 896 aa22.4■■□□□ 1.18
TSC2-219ENST00000563346 RTL5Q5HYW3 569 aaPredicted RBP22.39■■□□□ 1.17
TSC2-219ENST00000563346 TAF1P21675 1872 aa22.39■■□□□ 1.17
TSC2-219ENST00000563346 CXCL9Q07325 125 aa22.38■■□□□ 1.17
TSC2-219ENST00000563346 USP50Q70EL3 339 aaPredicted RBP22.38■■□□□ 1.17
TSC2-219ENST00000563346 KIAA2012Q0VF49 1180 aa22.37■■□□□ 1.17
TSC2-219ENST00000563346 SF3B3Q15393 1217 aaKnown RBP22.37■■□□□ 1.17
TSC2-219ENST00000563346 PHAXQ9H814 394 aaKnown RBP22.37■■□□□ 1.17
TSC2-219ENST00000563346 IRS4O14654 1257 aaPredicted RBP22.36■■□□□ 1.17
TSC2-219ENST00000563346 TRIM28Q13263 835 aaKnown RBP22.36■■□□□ 1.17
TSC2-219ENST00000563346 CIAPIN1Q6FI81 312 aa22.36■■□□□ 1.17
TSC2-219ENST00000563346 CHMP4AQ9BY43 222 aa22.36■■□□□ 1.17
TSC2-219ENST00000563346 GPRC5DQ9NZD1 345 aa22.36■■□□□ 1.17
TSC2-219ENST00000563346 C8orf58Q8NAV2 365 aa22.35■■□□□ 1.17
TSC2-219ENST00000563346 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
TSC2-219ENST00000563346 BCL2L13Q9BXK5 485 aa22.35■■□□□ 1.17
TSC2-219ENST00000563346 ADARB2Q9NS39 739 aaKnown RBP22.35■■□□□ 1.17
TSC2-219ENST00000563346 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
TSC2-219ENST00000563346 HSP90B1P14625 803 aaKnown RBP22.34■■□□□ 1.17
TSC2-219ENST00000563346 VEGFBP49765 207 aa22.34■■□□□ 1.17
TSC2-219ENST00000563346 GMPSP49915 693 aaPredicted RBP22.34■■□□□ 1.17
TSC2-219ENST00000563346 TNIP1Q15025 636 aa22.34■■□□□ 1.17
TSC2-219ENST00000563346 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
TSC2-219ENST00000563346 MYD88Q99836 296 aa22.34■■□□□ 1.17
TSC2-219ENST00000563346 ABT1Q9ULW3 272 aaKnown RBP22.34■■□□□ 1.17
TSC2-219ENST00000563346 LRRC37AA6NMS7 1700 aa22.34■■□□□ 1.17
TSC2-219ENST00000563346 RAD17O75943 681 aa22.33■■□□□ 1.17
TSC2-219ENST00000563346 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.17
TSC2-219ENST00000563346 ZBTB38Q8NAP3 1195 aaPredicted RBP22.33■■□□□ 1.17
TSC2-219ENST00000563346 DEFB115Q30KQ5 88 aa22.32■■□□□ 1.16
TSC2-219ENST00000563346 AIDAQ96BJ3 306 aa22.32■■□□□ 1.16
TSC2-219ENST00000563346 DUOX1Q9NRD9 1551 aa22.31■■□□□ 1.16
TSC2-219ENST00000563346 RASSF10A6NK89 507 aa22.31■■□□□ 1.16
TSC2-219ENST00000563346 C6orf229H3BNL8 230 aa22.31■■□□□ 1.16
TSC2-219ENST00000563346 WASHC4Q2M389 1173 aa22.31■■□□□ 1.16
TSC2-219ENST00000563346 CDHR2Q9BYE9 1310 aa22.31■■□□□ 1.16
TSC2-219ENST00000563346 RPS8P62241 208 aaKnown RBP22.3■■□□□ 1.16
TSC2-219ENST00000563346 CCDC184Q52MB2 194 aa22.3■■□□□ 1.16
TSC2-219ENST00000563346 CCDC191Q8NCU4 936 aa22.3■■□□□ 1.16
TSC2-219ENST00000563346 CWC25Q9NXE8 425 aaPredicted RBP22.3■■□□□ 1.16
TSC2-219ENST00000563346 YDJCA8MPS7 323 aa22.29■■□□□ 1.16
TSC2-219ENST00000563346 RIMBP2O15034 1052 aa22.29■■□□□ 1.16
TSC2-219ENST00000563346 GPSM2P81274 684 aa22.29■■□□□ 1.16
TSC2-219ENST00000563346 EYA3Q99504 573 aa22.29■■□□□ 1.16
TSC2-219ENST00000563346 PCCAP05165 728 aaPredicted RBP22.28■■□□□ 1.16
TSC2-219ENST00000563346 LBX1P52954 281 aa22.28■■□□□ 1.16
TSC2-219ENST00000563346 FMR1Q06787 632 aaKnown RBP eCLIP22.28■■□□□ 1.16
TSC2-219ENST00000563346 TSPYL6Q8N831 410 aa22.28■■□□□ 1.16
TSC2-219ENST00000563346 TSR2Q969E8 191 aaKnown RBP22.28■■□□□ 1.16
TSC2-219ENST00000563346 METTL22Q9BUU2 404 aaPredicted RBP22.28■■□□□ 1.16
TSC2-219ENST00000563346 TRAF5O00463 557 aa22.27■■□□□ 1.16
TSC2-219ENST00000563346 CTCFP49711 727 aaPredicted RBP22.27■■□□□ 1.16
TSC2-219ENST00000563346 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
TSC2-219ENST00000563346 PAXIP1Q6ZW49 1069 aaPredicted RBP22.27■■□□□ 1.16
TSC2-219ENST00000563346 STK31Q9BXU1 1019 aa22.27■■□□□ 1.16
TSC2-219ENST00000563346 DBNDD1Q9H9R9 158 aa22.27■■□□□ 1.16
TSC2-219ENST00000563346 POLLQ9UGP5 575 aa22.27■■□□□ 1.16
TSC2-219ENST00000563346 MAP3K2Q9Y2U5 619 aa22.27■■□□□ 1.16
TSC2-219ENST00000563346 TRPM7Q96QT4 1865 aa22.26■■□□□ 1.15
TSC2-219ENST00000563346 H7C1D1 291 aa22.26■■□□□ 1.15
TSC2-219ENST00000563346 PDE8AO60658 829 aa22.26■■□□□ 1.15
TSC2-219ENST00000563346 CCDC27Q2M243 656 aa22.26■■□□□ 1.15
TSC2-219ENST00000563346 JARID2Q92833 1246 aaPredicted RBP22.26■■□□□ 1.15
TSC2-219ENST00000563346 SEC31BQ9NQW1 1179 aa22.26■■□□□ 1.15
TSC2-219ENST00000563346 CNOT7Q9UIV1 285 aaKnown RBP22.26■■□□□ 1.15
TSC2-219ENST00000563346 COL4A1P02462 1669 aa22.26■■□□□ 1.15
TSC2-219ENST00000563346 WDR33Q9C0J8 1336 aaKnown RBP22.26■■□□□ 1.15
TSC2-219ENST00000563346 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
TSC2-219ENST00000563346 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
TSC2-219ENST00000563346 PRDM10Q9NQV6 1147 aa22.25■■□□□ 1.15
TSC2-219ENST00000563346 ANKIB1Q9P2G1 1089 aa22.25■■□□□ 1.15
TSC2-219ENST00000563346 DOK7Q18PE1 504 aa22.24■■□□□ 1.15
TSC2-219ENST00000563346 KSR2Q6VAB6 950 aa22.24■■□□□ 1.15
TSC2-219ENST00000563346 MICALL2Q8IY33 904 aa22.24■■□□□ 1.15
TSC2-219ENST00000563346 TBC1D16Q8TBP0 767 aa22.24■■□□□ 1.15
TSC2-219ENST00000563346 ZC3H15Q8WU90 426 aaKnown RBP22.24■■□□□ 1.15
TSC2-219ENST00000563346 CCDC85AQ96PX6 553 aaPredicted RBP22.24■■□□□ 1.15
TSC2-219ENST00000563346 ZC3H12CQ9C0D7 883 aaKnown RBP22.24■■□□□ 1.15
TSC2-219ENST00000563346 MRS2Q9HD23 443 aa22.24■■□□□ 1.15
TSC2-219ENST00000563346 ZBTB12Q9Y330 459 aaPredicted RBP22.24■■□□□ 1.15
TSC2-219ENST00000563346 G3V3G9 751 aa22.23■■□□□ 1.15
TSC2-219ENST00000563346 PSMD14O00487 310 aa22.23■■□□□ 1.15
TSC2-219ENST00000563346 ECE2O60344 883 aa22.23■■□□□ 1.15
TSC2-219ENST00000563346 ECE1P42892 770 aa22.23■■□□□ 1.15
TSC2-219ENST00000563346 NEXNQ0ZGT2 675 aa22.23■■□□□ 1.15
TSC2-219ENST00000563346 GRM1Q13255 1194 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms