RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 CCDC152Q4G0S7 254 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 G2E3Q7L622 706 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 SYNE4Q8N205 404 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
CYLD-204ENST00000562884 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
CYLD-204ENST00000562884 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 ABCC4O15439 1325 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
CYLD-204ENST00000562884 IGKV5-2P06315 115 aa11.31□□□□□ -0.6
CYLD-204ENST00000562884 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
CYLD-204ENST00000562884 RTL5Q5HYW3 569 aaPredicted RBP11.31□□□□□ -0.6
CYLD-204ENST00000562884 C16orf71Q8IYS4 520 aaPredicted RBP11.31□□□□□ -0.6
CYLD-204ENST00000562884 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
CYLD-204ENST00000562884 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
CYLD-204ENST00000562884 ALDH1L2Q3SY69 923 aa11.3□□□□□ -0.6
CYLD-204ENST00000562884 TRMT2AQ8IZ69 625 aaKnown RBP11.3□□□□□ -0.6
CYLD-204ENST00000562884 H7C1W4 665 aa11.29□□□□□ -0.6
CYLD-204ENST00000562884 VEGFAP15692 232 aaPredicted RBP11.29□□□□□ -0.6
CYLD-204ENST00000562884 PRELPP51888 382 aa11.29□□□□□ -0.6
CYLD-204ENST00000562884 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
CYLD-204ENST00000562884 GCKRQ14397 625 aa11.29□□□□□ -0.6
CYLD-204ENST00000562884 DPP8Q6V1X1 898 aaPredicted RBP11.29□□□□□ -0.6
CYLD-204ENST00000562884 MPNDQ8N594 471 aa11.29□□□□□ -0.6
CYLD-204ENST00000562884 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
CYLD-204ENST00000562884 PTPRCP08575 1304 aa11.29□□□□□ -0.6
CYLD-204ENST00000562884 SCN4AP35499 1836 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 KIF3CO14782 793 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 TOMM70O94826 608 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
CYLD-204ENST00000562884 OLFM4Q6UX06 510 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 CDC5LQ99459 802 aaKnown RBP11.28□□□□□ -0.6
CYLD-204ENST00000562884 PLA2G12BQ9BX93 195 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
CYLD-204ENST00000562884 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
CYLD-204ENST00000562884 SNED1Q8TER0 1413 aa11.27□□□□□ -0.6
CYLD-204ENST00000562884 LRRC37AA6NMS7 1700 aa11.27□□□□□ -0.61
CYLD-204ENST00000562884 CTSWP56202 376 aa11.27□□□□□ -0.61
CYLD-204ENST00000562884 EIF6P56537 245 aaKnown RBP11.27□□□□□ -0.61
CYLD-204ENST00000562884 BEND3Q5T5X7 828 aa11.27□□□□□ -0.61
CYLD-204ENST00000562884 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
CYLD-204ENST00000562884 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.61
CYLD-204ENST00000562884 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
CYLD-204ENST00000562884 CDCA7LQ96GN5 454 aa11.27□□□□□ -0.61
CYLD-204ENST00000562884 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.61
CYLD-204ENST00000562884 IQCA1LA6NCM1 817 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 FZD9O00144 591 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 ANKRD18AQ8IVF6 992 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 NIM1KQ8IY84 436 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 TTLL11Q8NHH1 800 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
CYLD-204ENST00000562884 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 CELF1Q92879 486 aaKnown RBP11.26□□□□□ -0.61
CYLD-204ENST00000562884 EYA3Q99504 573 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 SRCIN1Q9C0H9 1055 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 C9orf78Q9NZ63 289 aaPredicted RBP11.26□□□□□ -0.61
CYLD-204ENST00000562884 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
CYLD-204ENST00000562884 F6X3S4 739 aa11.25□□□□□ -0.61
CYLD-204ENST00000562884 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
CYLD-204ENST00000562884 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
CYLD-204ENST00000562884 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
CYLD-204ENST00000562884 SLC4A10Q6U841 1118 aa11.25□□□□□ -0.61
CYLD-204ENST00000562884 GPC2Q8N158 579 aa11.25□□□□□ -0.61
CYLD-204ENST00000562884 JARID2Q92833 1246 aaPredicted RBP11.25□□□□□ -0.61
CYLD-204ENST00000562884 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
CYLD-204ENST00000562884 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
CYLD-204ENST00000562884 GRM8O00222 908 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 CSF1RP07333 972 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
CYLD-204ENST00000562884 KIAA2012Q0VF49 1180 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 FSTL1Q12841 308 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 SEC31BQ9NQW1 1179 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 BSDC1Q9NW68 430 aaPredicted RBP11.24□□□□□ -0.61
CYLD-204ENST00000562884 PODXL2Q9NZ53 605 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
CYLD-204ENST00000562884 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
CYLD-204ENST00000562884 DDNO94850 711 aaPredicted RBP11.23□□□□□ -0.61
CYLD-204ENST00000562884 CASP7P55210 303 aa11.23□□□□□ -0.61
CYLD-204ENST00000562884 TNIP1Q15025 636 aa11.23□□□□□ -0.61
CYLD-204ENST00000562884 WASHC4Q2M389 1173 aa11.23□□□□□ -0.61
CYLD-204ENST00000562884 SMC1BQ8NDV3 1235 aa11.23□□□□□ -0.61
CYLD-204ENST00000562884 SPEF2Q9C093 1822 aa11.23□□□□□ -0.61
CYLD-204ENST00000562884 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
CYLD-204ENST00000562884 XDHP47989 1333 aa11.22□□□□□ -0.61
CYLD-204ENST00000562884 GPSM2P81274 684 aa11.22□□□□□ -0.61
CYLD-204ENST00000562884 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
CYLD-204ENST00000562884 AOC3Q16853 763 aa11.22□□□□□ -0.61
CYLD-204ENST00000562884 CCDC85AQ96PX6 553 aaPredicted RBP11.22□□□□□ -0.61
CYLD-204ENST00000562884 MPHOSPH8Q99549 860 aa11.22□□□□□ -0.61
CYLD-204ENST00000562884 API5Q9BZZ5 524 aaKnown RBP11.22□□□□□ -0.61
CYLD-204ENST00000562884 ZC3H12CQ9C0D7 883 aaKnown RBP11.22□□□□□ -0.61
CYLD-204ENST00000562884 GREM2Q9H772 168 aa11.22□□□□□ -0.61
CYLD-204ENST00000562884 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms