RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 MYD88Q99836 296 aa14.31□□□□□ -0.12
KLHDC4-209ENST00000562872 RTFDC1Q9BY42 306 aaPredicted RBP14.31□□□□□ -0.12
KLHDC4-209ENST00000562872 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
KLHDC4-209ENST00000562872 BBOX1O75936 387 aa14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 ITGBL1O95965 494 aaPredicted RBP14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 ZEB1P37275 1124 aaPredicted RBP14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 EPS15P42566 896 aa14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 EIF6P56537 245 aaKnown RBP14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 TRIM28Q13263 835 aaKnown RBP14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 MAP1SQ66K74 1059 aaPredicted RBP14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 DPP8Q6V1X1 898 aaPredicted RBP14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 RIC3Q7Z5B4 369 aa14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 SP8Q8IXZ3 490 aa14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 NIM1KQ8IY84 436 aa14.3□□□□□ -0.12
KLHDC4-209ENST00000562872 IRS4O14654 1257 aaPredicted RBP14.29□□□□□ -0.12
KLHDC4-209ENST00000562872 FMR1Q06787 632 aaKnown RBP eCLIP14.29□□□□□ -0.12
KLHDC4-209ENST00000562872 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
KLHDC4-209ENST00000562872 GRIPAP1Q4V328 841 aa14.29□□□□□ -0.12
KLHDC4-209ENST00000562872 MPNDQ8N594 471 aa14.29□□□□□ -0.12
KLHDC4-209ENST00000562872 YDJCA8MPS7 323 aa14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 CXCL9Q07325 125 aa14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 CCDC27Q2M243 656 aa14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 G2E3Q7L622 706 aa14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 GPR101Q96P66 508 aaPredicted RBP14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 SEC31BQ9NQW1 1179 aa14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 MKRN1Q9UHC7 482 aaKnown RBP14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
KLHDC4-209ENST00000562872 GPSM2P81274 684 aa14.27□□□□□ -0.13
KLHDC4-209ENST00000562872 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
KLHDC4-209ENST00000562872 ZBTB38Q8NAP3 1195 aaPredicted RBP14.27□□□□□ -0.13
KLHDC4-209ENST00000562872 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
KLHDC4-209ENST00000562872 MAP3K2Q9Y2U5 619 aa14.27□□□□□ -0.13
KLHDC4-209ENST00000562872 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 SHTN1A0MZ66 631 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 RAD17O75943 681 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 METTL22Q9BUU2 404 aaPredicted RBP14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 POLLQ9UGP5 575 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 ZNRF3Q9ULT6 936 aa14.26□□□□□ -0.13
KLHDC4-209ENST00000562872 PI4KAP2A4QPH2 592 aa14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 ANP32CO43423 234 aa14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 PCCAP05165 728 aaPredicted RBP14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 GMPSP49915 693 aaPredicted RBP14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 TWISTNBQ3B726 338 aaPredicted RBP14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 PNMA8AQ86V59 439 aaPredicted RBP14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 PI4KAP1Q8N8J0 262 aa14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 SUPT20HQ8NEM7 779 aa14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 NSFL1CQ9UNZ2 370 aaKnown RBP14.25□□□□□ -0.13
KLHDC4-209ENST00000562872 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 RIMBP2O15034 1052 aa14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 HSPA1AP0DMV8 641 aaKnown RBP14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 HSPA1BP0DMV9 641 aaKnown RBP14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 COL13A1Q5TAT6 717 aaPredicted RBP14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 VPS33BQ9H267 617 aa14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 DBNDD1Q9H9R9 158 aa14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 KCNQ5Q9NR82 932 aa14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 CWC25Q9NXE8 425 aaPredicted RBP14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 GPRC5DQ9NZD1 345 aa14.24□□□□□ -0.13
KLHDC4-209ENST00000562872 IL16Q14005 1332 aa14.23□□□□□ -0.13
KLHDC4-209ENST00000562872 TRAF5O00463 557 aa14.23□□□□□ -0.13
KLHDC4-209ENST00000562872 RPS8P62241 208 aaKnown RBP14.23□□□□□ -0.13
KLHDC4-209ENST00000562872 CIAPIN1Q6FI81 312 aa14.23□□□□□ -0.13
KLHDC4-209ENST00000562872 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
KLHDC4-209ENST00000562872 TMC4Q7Z404 712 aa14.23□□□□□ -0.13
KLHDC4-209ENST00000562872 TRPM4Q8TD43 1214 aa14.23□□□□□ -0.13
KLHDC4-209ENST00000562872 TMEM88BA6NKF7 163 aa14.22□□□□□ -0.13
KLHDC4-209ENST00000562872 DDX58O95786 925 aaKnown RBP14.22□□□□□ -0.13
KLHDC4-209ENST00000562872 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
KLHDC4-209ENST00000562872 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
KLHDC4-209ENST00000562872 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
KLHDC4-209ENST00000562872 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
KLHDC4-209ENST00000562872 WTIPA6NIX2 430 aaPredicted RBP14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 C6orf229H3BNL8 230 aa14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 PDE8AO60658 829 aa14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 VEGFBP49765 207 aa14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 HIRAP54198 1017 aaPredicted RBP14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 EXOSC9Q06265 439 aaKnown RBP14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 WASHC4Q2M389 1173 aa14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 USP50Q70EL3 339 aaPredicted RBP14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 TBC1D16Q8TBP0 767 aa14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 ADARB2Q9NS39 739 aaKnown RBP14.21□□□□□ -0.13
KLHDC4-209ENST00000562872 CDHR2Q9BYE9 1310 aa14.2□□□□□ -0.14
KLHDC4-209ENST00000562872 NEURL1BA8MQ27 555 aa14.2□□□□□ -0.14
KLHDC4-209ENST00000562872 PSMD14O00487 310 aa14.2□□□□□ -0.14
KLHDC4-209ENST00000562872 ECE2O60344 883 aa14.2□□□□□ -0.14
KLHDC4-209ENST00000562872 EGFRP00533 1210 aa14.2□□□□□ -0.14
KLHDC4-209ENST00000562872 CTSWP56202 376 aa14.2□□□□□ -0.14
KLHDC4-209ENST00000562872 FLIIQ13045 1269 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms