RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 SAPCD2Q86UD0 394 aa9.55□□□□□ -0.88
CNEP1R1-204ENST00000562576 SCNN1DP51172 638 aa9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 PLEKHO1Q53GL0 409 aaPredicted RBP9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 HABP4Q5JVS0 413 aaKnown RBP9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 STYK1Q6J9G0 422 aa9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 PNMA8AQ86V59 439 aaPredicted RBP9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 SYNE4Q8N205 404 aa9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 CNKSR1Q969H4 720 aa9.54□□□□□ -0.88
CNEP1R1-204ENST00000562576 CELF2O95319 508 aaKnown RBP9.53□□□□□ -0.88
CNEP1R1-204ENST00000562576 EIF5P55010 431 aaKnown RBP9.53□□□□□ -0.88
CNEP1R1-204ENST00000562576 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
CNEP1R1-204ENST00000562576 GLIS2Q9BZE0 524 aaPredicted RBP9.53□□□□□ -0.88
CNEP1R1-204ENST00000562576 KIF20BQ96Q89 1820 aa9.53□□□□□ -0.88
CNEP1R1-204ENST00000562576 HSP90AB1P08238 724 aaKnown RBP9.52□□□□□ -0.89
CNEP1R1-204ENST00000562576 IARSP41252 1262 aaKnown RBP9.52□□□□□ -0.89
CNEP1R1-204ENST00000562576 BRPF1P55201 1214 aaPredicted RBP9.52□□□□□ -0.89
CNEP1R1-204ENST00000562576 GPC2Q8N158 579 aa9.52□□□□□ -0.89
CNEP1R1-204ENST00000562576 MASTLQ96GX5 879 aa9.52□□□□□ -0.89
CNEP1R1-204ENST00000562576 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
CNEP1R1-204ENST00000562576 ZNF330Q9Y3S2 320 aaPredicted RBP9.52□□□□□ -0.89
CNEP1R1-204ENST00000562576 PIP4K2AP48426 406 aaPredicted RBP9.51□□□□□ -0.89
CNEP1R1-204ENST00000562576 CCDC93Q567U6 631 aa9.51□□□□□ -0.89
CNEP1R1-204ENST00000562576 SLC4A5Q9BY07 1137 aa9.51□□□□□ -0.89
CNEP1R1-204ENST00000562576 CRISPLD2Q9H0B8 497 aa9.51□□□□□ -0.89
CNEP1R1-204ENST00000562576 SHTN1A0MZ66 631 aa9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 TRPA1O75762 1119 aa9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 PDE4AP27815 886 aa9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 CNBD1Q8NA66 436 aa9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 KCNK17Q96T54 332 aa9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 HPS5Q9UPZ3 1129 aa9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 ANKRD26Q9UPS8 1709 aa9.5□□□□□ -0.89
CNEP1R1-204ENST00000562576 TRPM7Q96QT4 1865 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 FAM177BA6PVY3 158 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 FAM155AB1AL88 458 aaPredicted RBP9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 CA12O43570 354 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 CAMTA2O94983 1202 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 A1BGP04217 495 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 FXR1P51114 621 aaKnown RBP eCLIP9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 C1orf141Q5JVX7 400 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 SLC52A2Q9HAB3 445 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 RNF186Q9NXI6 227 aa9.49□□□□□ -0.89
CNEP1R1-204ENST00000562576 SNED1Q8TER0 1413 aa9.48□□□□□ -0.89
CNEP1R1-204ENST00000562576 A0A0C4DFX4 3053 aa9.48□□□□□ -0.89
CNEP1R1-204ENST00000562576 KIF23Q02241 960 aaPredicted RBP9.48□□□□□ -0.89
CNEP1R1-204ENST00000562576 PPP1R15BQ5SWA1 713 aa9.48□□□□□ -0.89
CNEP1R1-204ENST00000562576 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
CNEP1R1-204ENST00000562576 ZNF454Q8N9F8 522 aa9.48□□□□□ -0.89
CNEP1R1-204ENST00000562576 SETDB2Q96T68 719 aa9.48□□□□□ -0.89
CNEP1R1-204ENST00000562576 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 TCERG1O14776 1098 aaKnown RBP9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 RNMTO43148 476 aaKnown RBP9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 AMOTQ4VCS5 1084 aa9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 SOGA3Q5TF21 947 aa9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 PDZRN3Q9UPQ7 1066 aa9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 VPS9D1Q9Y2B5 631 aa9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 MKI67P46013 3256 aaKnown RBP9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 SCN11AQ9UI33 1791 aa9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
CNEP1R1-204ENST00000562576 DLL1O00548 723 aa9.46□□□□□ -0.9
CNEP1R1-204ENST00000562576 NPHP1O15259 732 aa9.46□□□□□ -0.9
CNEP1R1-204ENST00000562576 NPR1P16066 1061 aa9.46□□□□□ -0.9
CNEP1R1-204ENST00000562576 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
CNEP1R1-204ENST00000562576 USP50Q70EL3 339 aaPredicted RBP9.46□□□□□ -0.9
CNEP1R1-204ENST00000562576 USP48Q86UV5 1035 aa9.46□□□□□ -0.9
CNEP1R1-204ENST00000562576 ZNF496Q96IT1 587 aaPredicted RBP9.46□□□□□ -0.9
CNEP1R1-204ENST00000562576 PRAMEF22A3QJZ6 481 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 KLRG2A4D1S0 409 aaPredicted RBP9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 KCNQ3O43525 872 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 PTPREP23469 700 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 FOSBP53539 338 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 EIF6P56537 245 aaKnown RBP9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 HUNKP57058 714 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 ST5P78524 1137 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 CTU1Q7Z7A3 348 aaKnown RBP9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 RTKN2Q8IZC4 609 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 TRPM4Q8TD43 1214 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 GPRC5DQ9NZD1 345 aa9.45□□□□□ -0.9
CNEP1R1-204ENST00000562576 A0A087WZG4 1122 aa9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 GMPSP49915 693 aaPredicted RBP9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 NBPF5PQ86XG9 351 aaPredicted RBP9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 NBPF15Q8N660 670 aa9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 JDP2Q8WYK2 163 aa9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 HHIPL1Q96JK4 782 aa9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 CSRNP1Q96S65 589 aa9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 PGAP2Q9UHJ9 254 aa9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 SCN7AQ01118 1682 aa9.44□□□□□ -0.9
CNEP1R1-204ENST00000562576 EGFRP00533 1210 aa9.43□□□□□ -0.9
CNEP1R1-204ENST00000562576 CXCL9Q07325 125 aa9.43□□□□□ -0.9
CNEP1R1-204ENST00000562576 NOGQ13253 232 aa9.43□□□□□ -0.9
CNEP1R1-204ENST00000562576 AKAP4Q5JQC9 854 aa9.43□□□□□ -0.9
CNEP1R1-204ENST00000562576 LARGE2Q8N3Y3 721 aa9.43□□□□□ -0.9
CNEP1R1-204ENST00000562576 ADARB2Q9NS39 739 aaKnown RBP9.43□□□□□ -0.9
CNEP1R1-204ENST00000562576 BCORQ6W2J9 1755 aa9.42□□□□□ -0.9
CNEP1R1-204ENST00000562576 TBC1D8O95759 1140 aa9.42□□□□□ -0.9
CNEP1R1-204ENST00000562576 STARD3NLO95772 234 aa9.42□□□□□ -0.9
CNEP1R1-204ENST00000562576 MTHFSDQ2M296 383 aaKnown RBP9.42□□□□□ -0.9
CNEP1R1-204ENST00000562576 RGMBQ6NW40 437 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms