RNA–Protein interactions for RNA: ENST00000561631.1

RPAP1-203, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-203ENST00000561631 PTPRCP08575 1304 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 F6X3S4 739 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 BBOX1O75936 387 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 SF3B3Q15393 1217 aaKnown RBP16.78■□□□□ 0.28
RPAP1-203ENST00000561631 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 SLC4A10Q6U841 1118 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 OLFM4Q6UX06 510 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 BCL2L13Q9BXK5 485 aa16.78■□□□□ 0.28
RPAP1-203ENST00000561631 CTSWP56202 376 aa16.77■□□□□ 0.28
RPAP1-203ENST00000561631 GCKRQ14397 625 aa16.77■□□□□ 0.28
RPAP1-203ENST00000561631 PSMD1Q99460 953 aa16.77■□□□□ 0.28
RPAP1-203ENST00000561631 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
RPAP1-203ENST00000561631 SNED1Q8TER0 1413 aa16.77■□□□□ 0.27
RPAP1-203ENST00000561631 IARSP41252 1262 aaKnown RBP16.76■□□□□ 0.27
RPAP1-203ENST00000561631 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
RPAP1-203ENST00000561631 JARID2Q92833 1246 aaPredicted RBP16.76■□□□□ 0.27
RPAP1-203ENST00000561631 ZNF277Q9NRM2 450 aaPredicted RBP16.76■□□□□ 0.27
RPAP1-203ENST00000561631 ZBED9Q6R2W3 1325 aa16.75■□□□□ 0.27
RPAP1-203ENST00000561631 DPY19L2Q6NUT2 758 aa16.75■□□□□ 0.27
RPAP1-203ENST00000561631 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
RPAP1-203ENST00000561631 TRMT2AQ8IZ69 625 aaKnown RBP16.75■□□□□ 0.27
RPAP1-203ENST00000561631 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
RPAP1-203ENST00000561631 JDP2Q8WYK2 163 aa16.75■□□□□ 0.27
RPAP1-203ENST00000561631 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
RPAP1-203ENST00000561631 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
RPAP1-203ENST00000561631 SRCIN1Q9C0H9 1055 aa16.75■□□□□ 0.27
RPAP1-203ENST00000561631 KIF16BQ96L93 1317 aa16.74■□□□□ 0.27
RPAP1-203ENST00000561631 WDR90Q96KV7 1748 aa16.74■□□□□ 0.27
RPAP1-203ENST00000561631 PRELPP51888 382 aa16.74■□□□□ 0.27
RPAP1-203ENST00000561631 SP8Q8IXZ3 490 aa16.74■□□□□ 0.27
RPAP1-203ENST00000561631 C16orf71Q8IYS4 520 aaPredicted RBP16.74■□□□□ 0.27
RPAP1-203ENST00000561631 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
RPAP1-203ENST00000561631 COL4A1P02462 1669 aa16.73■□□□□ 0.27
RPAP1-203ENST00000561631 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
RPAP1-203ENST00000561631 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
RPAP1-203ENST00000561631 LARGE2Q8N3Y3 721 aa16.73■□□□□ 0.27
RPAP1-203ENST00000561631 MPNDQ8N594 471 aa16.73■□□□□ 0.27
RPAP1-203ENST00000561631 CELF1Q92879 486 aaKnown RBP16.73■□□□□ 0.27
RPAP1-203ENST00000561631 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
RPAP1-203ENST00000561631 LTBP1Q14766 1721 aa16.73■□□□□ 0.27
RPAP1-203ENST00000561631 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
RPAP1-203ENST00000561631 GLTPD2A6NH11 291 aa16.72■□□□□ 0.27
RPAP1-203ENST00000561631 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
RPAP1-203ENST00000561631 ALDH1L1O75891 902 aa16.72■□□□□ 0.27
RPAP1-203ENST00000561631 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
RPAP1-203ENST00000561631 RTL9Q8NET4 1388 aa16.72■□□□□ 0.27
RPAP1-203ENST00000561631 H7C1W4 665 aa16.71■□□□□ 0.27
RPAP1-203ENST00000561631 GRM8O00222 908 aa16.71■□□□□ 0.27
RPAP1-203ENST00000561631 RPS8P62241 208 aaKnown RBP16.71■□□□□ 0.27
RPAP1-203ENST00000561631 NMRK2Q9NPI5 230 aa16.71■□□□□ 0.27
RPAP1-203ENST00000561631 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.27
RPAP1-203ENST00000561631 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
RPAP1-203ENST00000561631 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
RPAP1-203ENST00000561631 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
RPAP1-203ENST00000561631 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
RPAP1-203ENST00000561631 SCN4AP35499 1836 aa16.7■□□□□ 0.26
RPAP1-203ENST00000561631 IGHMBP2P38935 993 aaKnown RBP16.69■□□□□ 0.26
RPAP1-203ENST00000561631 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
RPAP1-203ENST00000561631 AOC3Q16853 763 aa16.69■□□□□ 0.26
RPAP1-203ENST00000561631 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
RPAP1-203ENST00000561631 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
RPAP1-203ENST00000561631 VPS33BQ9H267 617 aa16.69■□□□□ 0.26
RPAP1-203ENST00000561631 GREM2Q9H772 168 aa16.69■□□□□ 0.26
RPAP1-203ENST00000561631 ANKIB1Q9P2G1 1089 aa16.69■□□□□ 0.26
RPAP1-203ENST00000561631 EYA3Q99504 573 aa16.68■□□□□ 0.26
RPAP1-203ENST00000561631 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
RPAP1-203ENST00000561631 A0A1B0GUL6 1792 aa16.68■□□□□ 0.26
RPAP1-203ENST00000561631 COL4A5P29400 1685 aa16.68■□□□□ 0.26
RPAP1-203ENST00000561631 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
RPAP1-203ENST00000561631 C6orf229H3BNL8 230 aa16.67■□□□□ 0.26
RPAP1-203ENST00000561631 KIF3CO14782 793 aa16.67■□□□□ 0.26
RPAP1-203ENST00000561631 ITGA6P23229 1130 aa16.67■□□□□ 0.26
RPAP1-203ENST00000561631 RARSP54136 660 aaKnown RBP16.67■□□□□ 0.26
RPAP1-203ENST00000561631 CASP7P55210 303 aa16.67■□□□□ 0.26
RPAP1-203ENST00000561631 C1QTNF8P60827 252 aa16.67■□□□□ 0.26
RPAP1-203ENST00000561631 TAF7LQ5H9L4 462 aa16.67■□□□□ 0.26
RPAP1-203ENST00000561631 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
RPAP1-203ENST00000561631 RTFDC1Q9BY42 306 aaPredicted RBP16.67■□□□□ 0.26
RPAP1-203ENST00000561631 ANKRD18BA2A2Z9 1011 aa16.66■□□□□ 0.26
RPAP1-203ENST00000561631 IQCA1LA6NCM1 817 aa16.66■□□□□ 0.26
RPAP1-203ENST00000561631 UFL1O94874 794 aa16.66■□□□□ 0.26
RPAP1-203ENST00000561631 VEGFAP15692 232 aaPredicted RBP16.66■□□□□ 0.26
RPAP1-203ENST00000561631 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
RPAP1-203ENST00000561631 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
RPAP1-203ENST00000561631 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
RPAP1-203ENST00000561631 RRAGCQ9HB90 399 aa16.66■□□□□ 0.26
RPAP1-203ENST00000561631 GGA1Q9UJY5 639 aa16.66■□□□□ 0.26
RPAP1-203ENST00000561631 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
RPAP1-203ENST00000561631 XDHP47989 1333 aa16.66■□□□□ 0.26
RPAP1-203ENST00000561631 G3V3G9 751 aa16.65■□□□□ 0.26
RPAP1-203ENST00000561631 FZD9O00144 591 aa16.65■□□□□ 0.26
RPAP1-203ENST00000561631 DDNO94850 711 aaPredicted RBP16.65■□□□□ 0.26
RPAP1-203ENST00000561631 GPSM2P81274 684 aa16.65■□□□□ 0.26
RPAP1-203ENST00000561631 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
RPAP1-203ENST00000561631 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
RPAP1-203ENST00000561631 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
RPAP1-203ENST00000561631 TOMM70O94826 608 aa16.64■□□□□ 0.25
RPAP1-203ENST00000561631 BRPF1P55201 1214 aaPredicted RBP16.64■□□□□ 0.25
RPAP1-203ENST00000561631 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms