RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 SOGA3Q5TF21 947 aa9.02□□□□□ -0.97
ZEB1-221ENST00000561061 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
ZEB1-221ENST00000561061 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
ZEB1-221ENST00000561061 CNKSR1Q969H4 720 aa9.02□□□□□ -0.97
ZEB1-221ENST00000561061 ZNF330Q9Y3S2 320 aaPredicted RBP9.02□□□□□ -0.97
ZEB1-221ENST00000561061 ZNF541Q9H0D2 1346 aa9.02□□□□□ -0.97
ZEB1-221ENST00000561061 COL4A5P29400 1685 aa9.01□□□□□ -0.97
ZEB1-221ENST00000561061 IQCA1LA6NCM1 817 aa9.01□□□□□ -0.97
ZEB1-221ENST00000561061 VEGFBP49765 207 aa9.01□□□□□ -0.97
ZEB1-221ENST00000561061 ST5P78524 1137 aa9.01□□□□□ -0.97
ZEB1-221ENST00000561061 ZNF790Q6PG37 636 aa9.01□□□□□ -0.97
ZEB1-221ENST00000561061 MASTLQ96GX5 879 aa9.01□□□□□ -0.97
ZEB1-221ENST00000561061 TAF1DQ9H5J8 278 aaPredicted RBP9.01□□□□□ -0.97
ZEB1-221ENST00000561061 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
ZEB1-221ENST00000561061 CEMIPQ8WUJ3 1361 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 SNED1Q8TER0 1413 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 TMEM88BA6NKF7 163 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 DIAPH1O60610 1272 aaKnown RBP9□□□□□ -0.97
ZEB1-221ENST00000561061 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
ZEB1-221ENST00000561061 CTCFP49711 727 aaPredicted RBP9□□□□□ -0.97
ZEB1-221ENST00000561061 TEFQ10587 303 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 ZNF454Q8N9F8 522 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 C7orf43Q8WVR3 580 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 AIDAQ96BJ3 306 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 SETDB2Q96T68 719 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 TEX13AQ9BXU3 409 aaPredicted RBP9□□□□□ -0.97
ZEB1-221ENST00000561061 WDR70Q9NW82 654 aa9□□□□□ -0.97
ZEB1-221ENST00000561061 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 NPHP1O15259 732 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 A1BGP04217 495 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 FOSBP53539 338 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 E2F4Q16254 413 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 CCDC93Q567U6 631 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 EAPPQ56P03 285 aaPredicted RBP8.99□□□□□ -0.97
ZEB1-221ENST00000561061 PPP4R3BQ5MIZ7 849 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
ZEB1-221ENST00000561061 IL17REQ8NFR9 667 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 FMNL2Q96PY5 1086 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 WBP1LQ9NX94 342 aa8.99□□□□□ -0.97
ZEB1-221ENST00000561061 HSPA8P11142 646 aaKnown RBP8.98□□□□□ -0.97
ZEB1-221ENST00000561061 NPR1P16066 1061 aa8.98□□□□□ -0.97
ZEB1-221ENST00000561061 PIP4K2AP48426 406 aaPredicted RBP8.98□□□□□ -0.97
ZEB1-221ENST00000561061 LBX1P52954 281 aa8.98□□□□□ -0.97
ZEB1-221ENST00000561061 FKBP4Q02790 459 aaKnown RBP eCLIP8.98□□□□□ -0.97
ZEB1-221ENST00000561061 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
ZEB1-221ENST00000561061 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
ZEB1-221ENST00000561061 ZNF277Q9NRM2 450 aaPredicted RBP8.98□□□□□ -0.97
ZEB1-221ENST00000561061 HACL1Q9UJ83 578 aa8.98□□□□□ -0.97
ZEB1-221ENST00000561061 DDX60Q8IY21 1712 aaKnown RBP8.97□□□□□ -0.97
ZEB1-221ENST00000561061 PSME4Q14997 1843 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 KLRG2A4D1S0 409 aaPredicted RBP8.97□□□□□ -0.97
ZEB1-221ENST00000561061 RASSF10A6NK89 507 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 KCNQ3O43525 872 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 EPHX2P34913 555 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 PBX2P40425 430 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 LSM11P83369 360 aaKnown RBP eCLIP8.97□□□□□ -0.97
ZEB1-221ENST00000561061 OLFM4Q6UX06 510 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 NPM2Q86SE8 214 aaKnown RBP8.97□□□□□ -0.97
ZEB1-221ENST00000561061 NBPF5PQ86XG9 351 aaPredicted RBP8.97□□□□□ -0.97
ZEB1-221ENST00000561061 KIF7Q2M1P5 1343 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 RNF123Q5XPI4 1314 aa8.97□□□□□ -0.97
ZEB1-221ENST00000561061 PSEN2P49810 448 aa8.96□□□□□ -0.98
ZEB1-221ENST00000561061 MAP1SQ66K74 1059 aaPredicted RBP8.96□□□□□ -0.98
ZEB1-221ENST00000561061 CLEC4GQ6UXB4 293 aa8.96□□□□□ -0.98
ZEB1-221ENST00000561061 USP16Q9Y5T5 823 aa8.96□□□□□ -0.98
ZEB1-221ENST00000561061 LRRC37AA6NMS7 1700 aa8.96□□□□□ -0.98
ZEB1-221ENST00000561061 PRAMEF22A3QJZ6 481 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 BTBD11A6QL63 1104 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 FZD9O00144 591 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 U2SURPO15042 1029 aaKnown RBP8.95□□□□□ -0.98
ZEB1-221ENST00000561061 PER1O15534 1290 aaPredicted RBP8.95□□□□□ -0.98
ZEB1-221ENST00000561061 IARSP41252 1262 aaKnown RBP8.95□□□□□ -0.98
ZEB1-221ENST00000561061 MMRN1Q13201 1228 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 DEFB115Q30KQ5 88 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 CC2D1BQ5T0F9 858 aaKnown RBP8.95□□□□□ -0.98
ZEB1-221ENST00000561061 ANKRD13DQ6ZTN6 518 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 PNMA8AQ86V59 439 aaPredicted RBP8.95□□□□□ -0.98
ZEB1-221ENST00000561061 RTKN2Q8IZC4 609 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 CNTROBQ8N137 903 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 ABHD8Q96I13 439 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 ZNF652Q9Y2D9 606 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 WDR33Q9C0J8 1336 aaKnown RBP8.95□□□□□ -0.98
ZEB1-221ENST00000561061 ABCC12Q96J65 1359 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 NPC1L1Q9UHC9 1359 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 RIC1Q4ADV7 1423 aa8.95□□□□□ -0.98
ZEB1-221ENST00000561061 ARHGAP33O14559 1287 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 MAP2K1Q02750 393 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-221ENST00000561061 PDIA6Q15084 440 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 FAM161AQ3B820 660 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 GPC2Q8N158 579 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 SYNE4Q8N205 404 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 PSMD1Q99460 953 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 ABT1Q9ULW3 272 aaKnown RBP8.94□□□□□ -0.98
ZEB1-221ENST00000561061 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
ZEB1-221ENST00000561061 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
ZEB1-221ENST00000561061 SCN9AQ15858 1988 aa8.93□□□□□ -0.98
ZEB1-221ENST00000561061 NBPF26B4DH59 902 aa8.93□□□□□ -0.98
ZEB1-221ENST00000561061 PRKAR2BP31323 418 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms