RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
SNX1-213ENST00000561026 LAMB2P55268 1798 aa20.99■□□□□ 0.95
SNX1-213ENST00000561026 GOLGA2Q08379 1002 aa20.98■□□□□ 0.95
SNX1-213ENST00000561026 TMC4Q7Z404 712 aa20.98■□□□□ 0.95
SNX1-213ENST00000561026 CNTROBQ8N137 903 aa20.98■□□□□ 0.95
SNX1-213ENST00000561026 ZNRF3Q9ULT6 936 aa20.98■□□□□ 0.95
SNX1-213ENST00000561026 ADAMTSL1Q8N6G6 1762 aa20.98■□□□□ 0.95
SNX1-213ENST00000561026 EPS15P42566 896 aa20.97■□□□□ 0.95
SNX1-213ENST00000561026 MAP1SQ66K74 1059 aaPredicted RBP20.97■□□□□ 0.95
SNX1-213ENST00000561026 MKRN1Q9UHC7 482 aaKnown RBP20.97■□□□□ 0.95
SNX1-213ENST00000561026 KIAA2012Q0VF49 1180 aa20.97■□□□□ 0.95
SNX1-213ENST00000561026 RTL5Q5HYW3 569 aaPredicted RBP20.97■□□□□ 0.95
SNX1-213ENST00000561026 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
SNX1-213ENST00000561026 TMEM88BA6NKF7 163 aa20.96■□□□□ 0.95
SNX1-213ENST00000561026 IRS4O14654 1257 aaPredicted RBP20.96■□□□□ 0.95
SNX1-213ENST00000561026 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
SNX1-213ENST00000561026 CXCL9Q07325 125 aa20.96■□□□□ 0.95
SNX1-213ENST00000561026 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
SNX1-213ENST00000561026 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
SNX1-213ENST00000561026 CELF1Q92879 486 aaKnown RBP20.95■□□□□ 0.94
SNX1-213ENST00000561026 LTBP1Q14766 1721 aa20.95■□□□□ 0.94
SNX1-213ENST00000561026 DDX60Q8IY21 1712 aaKnown RBP20.94■□□□□ 0.94
SNX1-213ENST00000561026 HSPA1AP0DMV8 641 aaKnown RBP20.94■□□□□ 0.94
SNX1-213ENST00000561026 HSPA1BP0DMV9 641 aaKnown RBP20.94■□□□□ 0.94
SNX1-213ENST00000561026 CCDC27Q2M243 656 aa20.94■□□□□ 0.94
SNX1-213ENST00000561026 COL13A1Q5TAT6 717 aaPredicted RBP20.94■□□□□ 0.94
SNX1-213ENST00000561026 USP50Q70EL3 339 aaPredicted RBP20.94■□□□□ 0.94
SNX1-213ENST00000561026 TSPYL6Q8N831 410 aa20.94■□□□□ 0.94
SNX1-213ENST00000561026 GPRC5DQ9NZD1 345 aa20.94■□□□□ 0.94
SNX1-213ENST00000561026 CNTNAP1P78357 1384 aa20.94■□□□□ 0.94
SNX1-213ENST00000561026 MYD88Q99836 296 aa20.93■□□□□ 0.94
SNX1-213ENST00000561026 TAF1P21675 1872 aa20.93■□□□□ 0.94
SNX1-213ENST00000561026 HSP90B1P14625 803 aaKnown RBP20.92■□□□□ 0.94
SNX1-213ENST00000561026 CIAPIN1Q6FI81 312 aa20.92■□□□□ 0.94
SNX1-213ENST00000561026 WWC1Q8IX03 1113 aa20.92■□□□□ 0.94
SNX1-213ENST00000561026 CCDC191Q8NCU4 936 aa20.92■□□□□ 0.94
SNX1-213ENST00000561026 TSR2Q969E8 191 aaKnown RBP20.92■□□□□ 0.94
SNX1-213ENST00000561026 NSFL1CQ9UNZ2 370 aaKnown RBP20.92■□□□□ 0.94
SNX1-213ENST00000561026 DDX58O95786 925 aaKnown RBP20.91■□□□□ 0.94
SNX1-213ENST00000561026 RPS8P62241 208 aaKnown RBP20.91■□□□□ 0.94
SNX1-213ENST00000561026 TNIP1Q15025 636 aa20.91■□□□□ 0.94
SNX1-213ENST00000561026 METTL22Q9BUU2 404 aaPredicted RBP20.91■□□□□ 0.94
SNX1-213ENST00000561026 ADARB2Q9NS39 739 aaKnown RBP20.91■□□□□ 0.94
SNX1-213ENST00000561026 RAD17O75943 681 aa20.9■□□□□ 0.94
SNX1-213ENST00000561026 PCCAP05165 728 aaPredicted RBP20.9■□□□□ 0.94
SNX1-213ENST00000561026 GMPSP49915 693 aaPredicted RBP20.9■□□□□ 0.94
SNX1-213ENST00000561026 DUOX1Q9NRD9 1551 aa20.9■□□□□ 0.94
SNX1-213ENST00000561026 YDJCA8MPS7 323 aa20.89■□□□□ 0.93
SNX1-213ENST00000561026 WASHC4Q2M389 1173 aa20.89■□□□□ 0.93
SNX1-213ENST00000561026 CWC25Q9NXE8 425 aaPredicted RBP20.89■□□□□ 0.93
SNX1-213ENST00000561026 LRRC37AA6NMS7 1700 aa20.89■□□□□ 0.93
SNX1-213ENST00000561026 VEGFBP49765 207 aa20.88■□□□□ 0.93
SNX1-213ENST00000561026 GPSM2P81274 684 aa20.88■□□□□ 0.93
SNX1-213ENST00000561026 NCBP3Q53F19 620 aaKnown RBP20.88■□□□□ 0.93
SNX1-213ENST00000561026 MRS2Q9HD23 443 aa20.88■□□□□ 0.93
SNX1-213ENST00000561026 POLLQ9UGP5 575 aa20.88■□□□□ 0.93
SNX1-213ENST00000561026 MAP3K2Q9Y2U5 619 aa20.88■□□□□ 0.93
SNX1-213ENST00000561026 CDHR2Q9BYE9 1310 aa20.88■□□□□ 0.93
SNX1-213ENST00000561026 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
SNX1-213ENST00000561026 KSR2Q6VAB6 950 aa20.87■□□□□ 0.93
SNX1-213ENST00000561026 BCL2L13Q9BXK5 485 aa20.87■□□□□ 0.93
SNX1-213ENST00000561026 SEC31BQ9NQW1 1179 aa20.87■□□□□ 0.93
SNX1-213ENST00000561026 COL4A1P02462 1669 aa20.87■□□□□ 0.93
SNX1-213ENST00000561026 PI4KAP2A4QPH2 592 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
SNX1-213ENST00000561026 C6orf229H3BNL8 230 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 PDE8AO60658 829 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 DEFB115Q30KQ5 88 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 CCDC152Q4G0S7 254 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 PI4KAP1Q8N8J0 262 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
SNX1-213ENST00000561026 STK31Q9BXU1 1019 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 IL16Q14005 1332 aa20.86■□□□□ 0.93
SNX1-213ENST00000561026 RIMBP2O15034 1052 aa20.85■□□□□ 0.93
SNX1-213ENST00000561026 ANP32CO43423 234 aa20.85■□□□□ 0.93
SNX1-213ENST00000561026 FMR1Q06787 632 aaKnown RBP eCLIP20.85■□□□□ 0.93
SNX1-213ENST00000561026 TWISTNBQ3B726 338 aaPredicted RBP20.85■□□□□ 0.93
SNX1-213ENST00000561026 TBC1D16Q8TBP0 767 aa20.85■□□□□ 0.93
SNX1-213ENST00000561026 ABT1Q9ULW3 272 aaKnown RBP20.85■□□□□ 0.93
SNX1-213ENST00000561026 EYA3Q99504 573 aa20.85■□□□□ 0.93
SNX1-213ENST00000561026 DBNDD1Q9H9R9 158 aa20.85■□□□□ 0.93
SNX1-213ENST00000561026 PGAP2Q9UHJ9 254 aa20.85■□□□□ 0.93
SNX1-213ENST00000561026 CNOT7Q9UIV1 285 aaKnown RBP20.85■□□□□ 0.93
SNX1-213ENST00000561026 TRAF5O00463 557 aa20.84■□□□□ 0.93
SNX1-213ENST00000561026 IGKV5-2P06315 115 aa20.84■□□□□ 0.93
SNX1-213ENST00000561026 CST9Q5W186 159 aa20.84■□□□□ 0.93
SNX1-213ENST00000561026 PODXL2Q9NZ53 605 aa20.84■□□□□ 0.93
SNX1-213ENST00000561026 SLC4A2P04920 1241 aa20.83■□□□□ 0.92
SNX1-213ENST00000561026 HIRAP54198 1017 aaPredicted RBP20.83■□□□□ 0.92
SNX1-213ENST00000561026 TNS4Q8IZW8 715 aa20.83■□□□□ 0.92
SNX1-213ENST00000561026 ZC3H15Q8WU90 426 aaKnown RBP20.83■□□□□ 0.92
SNX1-213ENST00000561026 DPF2Q92785 391 aa20.83■□□□□ 0.92
SNX1-213ENST00000561026 CCDC85AQ96PX6 553 aaPredicted RBP20.83■□□□□ 0.92
SNX1-213ENST00000561026 H7C1D1 291 aa20.82■□□□□ 0.92
SNX1-213ENST00000561026 PSMD14O00487 310 aa20.82■□□□□ 0.92
SNX1-213ENST00000561026 NEXNQ0ZGT2 675 aa20.82■□□□□ 0.92
SNX1-213ENST00000561026 DOK7Q18PE1 504 aa20.82■□□□□ 0.92
SNX1-213ENST00000561026 G2E3Q7L622 706 aa20.82■□□□□ 0.92
SNX1-213ENST00000561026 ZC3H12CQ9C0D7 883 aaKnown RBP20.82■□□□□ 0.92
SNX1-213ENST00000561026 ANKIB1Q9P2G1 1089 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms