RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GRAPQ13588 217 aa19.44■□□□□ 0.7
SNRPA1-213ENST00000560856 RTKN2Q8IZC4 609 aa19.44■□□□□ 0.7
SNRPA1-213ENST00000560856 GRAPLQ8TC17 118 aaPredicted RBP19.44■□□□□ 0.7
SNRPA1-213ENST00000560856 ATP6V0A2Q9Y487 856 aa19.44■□□□□ 0.7
SNRPA1-213ENST00000560856 HSP90B1P14625 803 aaKnown RBP19.43■□□□□ 0.7
SNRPA1-213ENST00000560856 RARSP54136 660 aaKnown RBP19.43■□□□□ 0.7
SNRPA1-213ENST00000560856 FKBP4Q02790 459 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNRPA1-213ENST00000560856 UBE3BQ7Z3V4 1068 aa19.43■□□□□ 0.7
SNRPA1-213ENST00000560856 CELF1Q92879 486 aaKnown RBP19.43■□□□□ 0.7
SNRPA1-213ENST00000560856 PTPRCP08575 1304 aa19.43■□□□□ 0.7
SNRPA1-213ENST00000560856 CCDC88AQ3V6T2 1871 aa19.42■□□□□ 0.7
SNRPA1-213ENST00000560856 SP8Q8IXZ3 490 aa19.42■□□□□ 0.7
SNRPA1-213ENST00000560856 PLA2G12BQ9BX93 195 aa19.42■□□□□ 0.7
SNRPA1-213ENST00000560856 SEC31BQ9NQW1 1179 aa19.42■□□□□ 0.7
SNRPA1-213ENST00000560856 SMC4Q9NTJ3 1288 aa19.42■□□□□ 0.7
SNRPA1-213ENST00000560856 TTLL11Q8NHH1 800 aa19.41■□□□□ 0.7
SNRPA1-213ENST00000560856 PSMD1Q99460 953 aa19.41■□□□□ 0.7
SNRPA1-213ENST00000560856 ALDH1L1O75891 902 aa19.4■□□□□ 0.7
SNRPA1-213ENST00000560856 CTSWP56202 376 aa19.4■□□□□ 0.7
SNRPA1-213ENST00000560856 GRIPAP1Q4V328 841 aa19.4■□□□□ 0.7
SNRPA1-213ENST00000560856 SLC4A10Q6U841 1118 aa19.4■□□□□ 0.7
SNRPA1-213ENST00000560856 ZC3H4Q9UPT8 1303 aaKnown RBP19.4■□□□□ 0.7
SNRPA1-213ENST00000560856 RPS8P62241 208 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-213ENST00000560856 CCDC152Q4G0S7 254 aa19.39■□□□□ 0.69
SNRPA1-213ENST00000560856 SRCIN1Q9C0H9 1055 aa19.39■□□□□ 0.69
SNRPA1-213ENST00000560856 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-213ENST00000560856 CSF1RP07333 972 aa19.38■□□□□ 0.69
SNRPA1-213ENST00000560856 TMC4Q7Z404 712 aa19.38■□□□□ 0.69
SNRPA1-213ENST00000560856 CCDC85AQ96PX6 553 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-213ENST00000560856 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
SNRPA1-213ENST00000560856 DICER1Q9UPY3 1922 aaKnown RBP19.38■□□□□ 0.69
SNRPA1-213ENST00000560856 RTL9Q8NET4 1388 aa19.37■□□□□ 0.69
SNRPA1-213ENST00000560856 GRM8O00222 908 aa19.37■□□□□ 0.69
SNRPA1-213ENST00000560856 ZNF526Q8TF50 670 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-213ENST00000560856 RTFDC1Q9BY42 306 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-213ENST00000560856 GREM2Q9H772 168 aa19.37■□□□□ 0.69
SNRPA1-213ENST00000560856 UTYO14607 1347 aa19.36■□□□□ 0.69
SNRPA1-213ENST00000560856 IARSP41252 1262 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-213ENST00000560856 FOXO4P98177 505 aa19.36■□□□□ 0.69
SNRPA1-213ENST00000560856 EPHA10Q5JZY3 1008 aa19.36■□□□□ 0.69
SNRPA1-213ENST00000560856 GPBP1L1Q9HC44 474 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-213ENST00000560856 LRRC37AA6NMS7 1700 aa19.35■□□□□ 0.69
SNRPA1-213ENST00000560856 COL4A5P29400 1685 aa19.35■□□□□ 0.69
SNRPA1-213ENST00000560856 MYH3P11055 1940 aa19.35■□□□□ 0.69
SNRPA1-213ENST00000560856 GLTPD2A6NH11 291 aa19.34■□□□□ 0.69
SNRPA1-213ENST00000560856 BCAR3O75815 825 aa19.34■□□□□ 0.69
SNRPA1-213ENST00000560856 MPNDQ8N594 471 aa19.34■□□□□ 0.69
SNRPA1-213ENST00000560856 KAZALD1Q96I82 304 aa19.34■□□□□ 0.69
SNRPA1-213ENST00000560856 KIF3CO14782 793 aa19.33■□□□□ 0.68
SNRPA1-213ENST00000560856 NBPF7P0C2Y1 421 aaPredicted RBP19.33■□□□□ 0.68
SNRPA1-213ENST00000560856 ARHGAP45Q92619 1136 aa19.33■□□□□ 0.68
SNRPA1-213ENST00000560856 NMRK2Q9NPI5 230 aa19.33■□□□□ 0.68
SNRPA1-213ENST00000560856 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.68
SNRPA1-213ENST00000560856 TIAM2Q8IVF5 1701 aa19.33■□□□□ 0.68
SNRPA1-213ENST00000560856 DUOX1Q9NRD9 1551 aa19.32■□□□□ 0.68
SNRPA1-213ENST00000560856 FZD9O00144 591 aa19.32■□□□□ 0.68
SNRPA1-213ENST00000560856 GPSM2P81274 684 aa19.32■□□□□ 0.68
SNRPA1-213ENST00000560856 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
SNRPA1-213ENST00000560856 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-213ENST00000560856 USP44Q9H0E7 712 aa19.32■□□□□ 0.68
SNRPA1-213ENST00000560856 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-213ENST00000560856 ANKRD18AQ8IVF6 992 aa19.31■□□□□ 0.68
SNRPA1-213ENST00000560856 SUCLG2Q96I99 432 aa19.31■□□□□ 0.68
SNRPA1-213ENST00000560856 CDC5LQ99459 802 aaKnown RBP19.31■□□□□ 0.68
SNRPA1-213ENST00000560856 API5Q9BZZ5 524 aaKnown RBP19.31■□□□□ 0.68
SNRPA1-213ENST00000560856 VPS33BQ9H267 617 aa19.31■□□□□ 0.68
SNRPA1-213ENST00000560856 POLLQ9UGP5 575 aa19.31■□□□□ 0.68
SNRPA1-213ENST00000560856 KIF16BQ96L93 1317 aa19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 POTECB2RU33 542 aa19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 ITGA6P23229 1130 aa19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 LMBR1LQ6UX01 489 aa19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 SUPT20HQ8NEM7 779 aa19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 BSDC1Q9NW68 430 aaPredicted RBP19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 NSFL1CQ9UNZ2 370 aaKnown RBP19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
SNRPA1-213ENST00000560856 KDM2BQ8NHM5 1336 aa19.29■□□□□ 0.68
SNRPA1-213ENST00000560856 KIAA2012Q0VF49 1180 aa19.29■□□□□ 0.68
SNRPA1-213ENST00000560856 AOC3Q16853 763 aa19.29■□□□□ 0.68
SNRPA1-213ENST00000560856 LARGE2Q8N3Y3 721 aa19.29■□□□□ 0.68
SNRPA1-213ENST00000560856 TNNQ9UQP3 1299 aa19.29■□□□□ 0.68
SNRPA1-213ENST00000560856 ZNF541Q9H0D2 1346 aa19.28■□□□□ 0.68
SNRPA1-213ENST00000560856 PPIP5K2O43314 1243 aa19.28■□□□□ 0.68
SNRPA1-213ENST00000560856 DDNO94850 711 aaPredicted RBP19.28■□□□□ 0.68
SNRPA1-213ENST00000560856 CCT4P50991 539 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-213ENST00000560856 MINPP1Q9UNW1 487 aa19.28■□□□□ 0.68
SNRPA1-213ENST00000560856 TRIM27P14373 513 aa19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 RABL6Q3YEC7 729 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 INTS3Q68E01 1043 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 DPY19L2Q6NUT2 758 aa19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 ANKRD44Q8N8A2 993 aa19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 TBC1D16Q8TBP0 767 aa19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 JDP2Q8WYK2 163 aa19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 RRAGCQ9HB90 399 aa19.27■□□□□ 0.68
SNRPA1-213ENST00000560856 WTIPA6NIX2 430 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-213ENST00000560856 IPO8O15397 1037 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-213ENST00000560856 ATF7IPQ6VMQ6 1270 aa19.26■□□□□ 0.67
SNRPA1-213ENST00000560856 ANKRD18BA2A2Z9 1011 aa19.25■□□□□ 0.67
SNRPA1-213ENST00000560856 IFIT5Q13325 482 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-213ENST00000560856 GPR101Q96P66 508 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms