RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 GRAPLQ8TC17 118 aaPredicted RBP14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 CELF1Q92879 486 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 CDCA7LQ96GN5 454 aa14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 NEURL1BA8MQ27 555 aa14.91□□□□□ -0.02
RABGGTA-216ENST00000560243 TOMM70O94826 608 aa14.91□□□□□ -0.02
RABGGTA-216ENST00000560243 WDR90Q96KV7 1748 aa14.91□□□□□ -0.02
RABGGTA-216ENST00000560243 F6X3S4 739 aa14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 SLFN5Q08AF3 891 aa14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 NEXNQ0ZGT2 675 aa14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 DPY19L2Q6NUT2 758 aa14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 SP8Q8IXZ3 490 aa14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 DNAAF4Q8WXU2 420 aa14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 SEC31BQ9NQW1 1179 aa14.9□□□□□ -0.02
RABGGTA-216ENST00000560243 LRRC37AA6NMS7 1700 aa14.89□□□□□ -0.03
RABGGTA-216ENST00000560243 E9PSI1 815 aa14.89□□□□□ -0.03
RABGGTA-216ENST00000560243 VEGFAP15692 232 aaPredicted RBP14.89□□□□□ -0.03
RABGGTA-216ENST00000560243 DUOX1Q9NRD9 1551 aa14.89□□□□□ -0.03
RABGGTA-216ENST00000560243 FZD9O00144 591 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 PDE8AO60658 829 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 GCKRQ14397 625 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 AOC3Q16853 763 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 GRIPAP1Q4V328 841 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 UBE3BQ7Z3V4 1068 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 LARGE2Q8N3Y3 721 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 MPNDQ8N594 471 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 CDHR2Q9BYE9 1310 aa14.88□□□□□ -0.03
RABGGTA-216ENST00000560243 H7C1W4 665 aa14.87□□□□□ -0.03
RABGGTA-216ENST00000560243 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
RABGGTA-216ENST00000560243 RBM46Q8TBY0 533 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-216ENST00000560243 RTFDC1Q9BY42 306 aaPredicted RBP14.87□□□□□ -0.03
RABGGTA-216ENST00000560243 MYH3P11055 1940 aa14.87□□□□□ -0.03
RABGGTA-216ENST00000560243 PPIP5K2O43314 1243 aa14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 CASP7P55210 303 aa14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 CTSWP56202 376 aa14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 RPS8P62241 208 aaKnown RBP14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 CCDC152Q4G0S7 254 aa14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 TRMT2AQ8IZ69 625 aaKnown RBP14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 LINS1Q8NG48 757 aa14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 JDP2Q8WYK2 163 aa14.86□□□□□ -0.03
RABGGTA-216ENST00000560243 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 HSPA6P17066 643 aa14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 GPSM2P81274 684 aa14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 BEND3Q5T5X7 828 aa14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 MRPL50Q8N5N7 158 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 TTLL11Q8NHH1 800 aa14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 LTBP1Q14766 1721 aa14.85□□□□□ -0.03
RABGGTA-216ENST00000560243 POTEIP0CG38 1075 aa14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 POTEJP0CG39 1038 aa14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 NIM1KQ8IY84 436 aa14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 SSH1Q8WYL5 1049 aa14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 L3MBTL3Q96JM7 780 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 GPR101Q96P66 508 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 BCL2L13Q9BXK5 485 aa14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 GREM2Q9H772 168 aa14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 NSFL1CQ9UNZ2 370 aaKnown RBP14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 SPEF2Q9C093 1822 aa14.84□□□□□ -0.03
RABGGTA-216ENST00000560243 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
RABGGTA-216ENST00000560243 POLLQ9UGP5 575 aa14.83□□□□□ -0.04
RABGGTA-216ENST00000560243 GJA3Q9Y6H8 435 aa14.83□□□□□ -0.04
RABGGTA-216ENST00000560243 SCN4AP35499 1836 aa14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 EIF6P56537 245 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 KIAA2012Q0VF49 1180 aa14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 FSTL1Q12841 308 aa14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 SLC4A10Q6U841 1118 aa14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 GPC2Q8N158 579 aa14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 VPS33BQ9H267 617 aa14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 TAF1DQ9H5J8 278 aaPredicted RBP14.82□□□□□ -0.04
RABGGTA-216ENST00000560243 WTIPA6NIX2 430 aaPredicted RBP14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 C6orf229H3BNL8 230 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 RIMBP2O15034 1052 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 CXCL9Q07325 125 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 ANKRD18AQ8IVF6 992 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 SMC1BQ8NDV3 1235 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 TBC1D16Q8TBP0 767 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 PLA2G12BQ9BX93 195 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 ZNRF3Q9ULT6 936 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
RABGGTA-216ENST00000560243 IQCA1LA6NCM1 817 aa14.8□□□□□ -0.04
RABGGTA-216ENST00000560243 YDJCA8MPS7 323 aa14.8□□□□□ -0.04
RABGGTA-216ENST00000560243 HTRA3P83110 453 aa14.8□□□□□ -0.04
RABGGTA-216ENST00000560243 WASHC4Q2M389 1173 aa14.8□□□□□ -0.04
RABGGTA-216ENST00000560243 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
RABGGTA-216ENST00000560243 EPHA10Q5JZY3 1008 aa14.8□□□□□ -0.04
RABGGTA-216ENST00000560243 HACL1Q9UJ83 578 aa14.8□□□□□ -0.04
RABGGTA-216ENST00000560243 GRM8O00222 908 aa14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 RAD17O75943 681 aa14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 CSF1RP07333 972 aa14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 SCNN1DP51172 638 aa14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 FOXO4P98177 505 aa14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 CDC5LQ99459 802 aaKnown RBP14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 PODXL2Q9NZ53 605 aa14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 ANKIB1Q9P2G1 1089 aa14.79□□□□□ -0.04
RABGGTA-216ENST00000560243 UFL1O94874 794 aa14.78□□□□□ -0.04
RABGGTA-216ENST00000560243 ITGA6P23229 1130 aa14.78□□□□□ -0.04
RABGGTA-216ENST00000560243 EPHX2P34913 555 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms