RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
SMAD3-213ENST00000560175 POTECB2RU33 542 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 PDE8AO60658 829 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
SMAD3-213ENST00000560175 NEXNQ0ZGT2 675 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 DPY19L2Q6NUT2 758 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 DNAAF4Q8WXU2 420 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
SMAD3-213ENST00000560175 MYH3P11055 1940 aa16.9■□□□□ 0.3
SMAD3-213ENST00000560175 COL4A1P02462 1669 aa16.89■□□□□ 0.29
SMAD3-213ENST00000560175 FZD9O00144 591 aa16.89■□□□□ 0.29
SMAD3-213ENST00000560175 TOMM70O94826 608 aa16.89■□□□□ 0.29
SMAD3-213ENST00000560175 FKBP5Q13451 457 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-213ENST00000560175 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
SMAD3-213ENST00000560175 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-213ENST00000560175 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
SMAD3-213ENST00000560175 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
SMAD3-213ENST00000560175 RRAGCQ9HB90 399 aa16.89■□□□□ 0.29
SMAD3-213ENST00000560175 CASP7P55210 303 aa16.88■□□□□ 0.29
SMAD3-213ENST00000560175 GCKRQ14397 625 aa16.88■□□□□ 0.29
SMAD3-213ENST00000560175 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
SMAD3-213ENST00000560175 PLA2G12BQ9BX93 195 aa16.88■□□□□ 0.29
SMAD3-213ENST00000560175 COL4A5P29400 1685 aa16.88■□□□□ 0.29
SMAD3-213ENST00000560175 VEGFAP15692 232 aaPredicted RBP16.87■□□□□ 0.29
SMAD3-213ENST00000560175 RPS8P62241 208 aaKnown RBP16.87■□□□□ 0.29
SMAD3-213ENST00000560175 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
SMAD3-213ENST00000560175 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
SMAD3-213ENST00000560175 TTLL11Q8NHH1 800 aa16.86■□□□□ 0.29
SMAD3-213ENST00000560175 JARID2Q92833 1246 aaPredicted RBP16.86■□□□□ 0.29
SMAD3-213ENST00000560175 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
SMAD3-213ENST00000560175 LTBP1Q14766 1721 aa16.86■□□□□ 0.29
SMAD3-213ENST00000560175 RTL9Q8NET4 1388 aa16.86■□□□□ 0.29
SMAD3-213ENST00000560175 SCN4AP35499 1836 aa16.85■□□□□ 0.29
SMAD3-213ENST00000560175 CT47B1P0C2W7 299 aaPredicted RBP16.85■□□□□ 0.29
SMAD3-213ENST00000560175 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
SMAD3-213ENST00000560175 MPNDQ8N594 471 aa16.85■□□□□ 0.29
SMAD3-213ENST00000560175 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
SMAD3-213ENST00000560175 TMX4Q9H1E5 349 aaPredicted RBP16.85■□□□□ 0.29
SMAD3-213ENST00000560175 SEC31BQ9NQW1 1179 aa16.85■□□□□ 0.29
SMAD3-213ENST00000560175 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
SMAD3-213ENST00000560175 F6X3S4 739 aa16.84■□□□□ 0.29
SMAD3-213ENST00000560175 DDNO94850 711 aaPredicted RBP16.84■□□□□ 0.29
SMAD3-213ENST00000560175 CSF1RP07333 972 aa16.84■□□□□ 0.29
SMAD3-213ENST00000560175 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
SMAD3-213ENST00000560175 SUPT20HQ8NEM7 779 aa16.84■□□□□ 0.29
SMAD3-213ENST00000560175 BRPF1P55201 1214 aaPredicted RBP16.83■□□□□ 0.28
SMAD3-213ENST00000560175 CTSWP56202 376 aa16.83■□□□□ 0.28
SMAD3-213ENST00000560175 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
SMAD3-213ENST00000560175 JDP2Q8WYK2 163 aa16.83■□□□□ 0.28
SMAD3-213ENST00000560175 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
SMAD3-213ENST00000560175 PODXL2Q9NZ53 605 aa16.83■□□□□ 0.28
SMAD3-213ENST00000560175 ZNF541Q9H0D2 1346 aa16.82■□□□□ 0.28
SMAD3-213ENST00000560175 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
SMAD3-213ENST00000560175 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
SMAD3-213ENST00000560175 PTPRCP08575 1304 aa16.81■□□□□ 0.28
SMAD3-213ENST00000560175 ALDH1L1O75891 902 aa16.81■□□□□ 0.28
SMAD3-213ENST00000560175 FSTL1Q12841 308 aa16.81■□□□□ 0.28
SMAD3-213ENST00000560175 GPC2Q8N158 579 aa16.81■□□□□ 0.28
SMAD3-213ENST00000560175 LARGE2Q8N3Y3 721 aa16.81■□□□□ 0.28
SMAD3-213ENST00000560175 HSPA6P17066 643 aa16.8■□□□□ 0.28
SMAD3-213ENST00000560175 AOC3Q16853 763 aa16.8■□□□□ 0.28
SMAD3-213ENST00000560175 POLLQ9UGP5 575 aa16.8■□□□□ 0.28
SMAD3-213ENST00000560175 UTYO14607 1347 aa16.79■□□□□ 0.28
SMAD3-213ENST00000560175 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
SMAD3-213ENST00000560175 GPSM2P81274 684 aa16.79■□□□□ 0.28
SMAD3-213ENST00000560175 FOXO4P98177 505 aa16.79■□□□□ 0.28
SMAD3-213ENST00000560175 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
SMAD3-213ENST00000560175 GREM2Q9H772 168 aa16.79■□□□□ 0.28
SMAD3-213ENST00000560175 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
SMAD3-213ENST00000560175 ZNRF3Q9ULT6 936 aa16.79■□□□□ 0.28
SMAD3-213ENST00000560175 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
SMAD3-213ENST00000560175 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
SMAD3-213ENST00000560175 GRM8O00222 908 aa16.78■□□□□ 0.28
SMAD3-213ENST00000560175 EIF6P56537 245 aaKnown RBP16.78■□□□□ 0.28
SMAD3-213ENST00000560175 ANKRD18AQ8IVF6 992 aa16.78■□□□□ 0.28
SMAD3-213ENST00000560175 TBC1D16Q8TBP0 767 aa16.78■□□□□ 0.28
SMAD3-213ENST00000560175 CDC5LQ99459 802 aaKnown RBP16.78■□□□□ 0.28
SMAD3-213ENST00000560175 SRCIN1Q9C0H9 1055 aa16.78■□□□□ 0.28
SMAD3-213ENST00000560175 IQCA1LA6NCM1 817 aa16.77■□□□□ 0.28
SMAD3-213ENST00000560175 NIM1KQ8IY84 436 aa16.77■□□□□ 0.28
SMAD3-213ENST00000560175 TAF1DQ9H5J8 278 aaPredicted RBP16.77■□□□□ 0.28
SMAD3-213ENST00000560175 CXCL9Q07325 125 aa16.76■□□□□ 0.27
SMAD3-213ENST00000560175 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
SMAD3-213ENST00000560175 SMC1BQ8NDV3 1235 aa16.76■□□□□ 0.27
SMAD3-213ENST00000560175 CCDC85AQ96PX6 553 aaPredicted RBP16.76■□□□□ 0.27
SMAD3-213ENST00000560175 MINPP1Q9UNW1 487 aa16.76■□□□□ 0.27
SMAD3-213ENST00000560175 ADAMTSL1Q8N6G6 1762 aa16.76■□□□□ 0.27
SMAD3-213ENST00000560175 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
SMAD3-213ENST00000560175 ITGA6P23229 1130 aa16.75■□□□□ 0.27
SMAD3-213ENST00000560175 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
SMAD3-213ENST00000560175 SCNN1DP51172 638 aa16.74■□□□□ 0.27
SMAD3-213ENST00000560175 RARSP54136 660 aaKnown RBP16.74■□□□□ 0.27
SMAD3-213ENST00000560175 EPHA10Q5JZY3 1008 aa16.74■□□□□ 0.27
SMAD3-213ENST00000560175 SLC4A10Q6U841 1118 aa16.74■□□□□ 0.27
SMAD3-213ENST00000560175 EYA3Q99504 573 aa16.74■□□□□ 0.27
SMAD3-213ENST00000560175 HACL1Q9UJ83 578 aa16.74■□□□□ 0.27
SMAD3-213ENST00000560175 SPEF2Q9C093 1822 aa16.74■□□□□ 0.27
SMAD3-213ENST00000560175 XDHP47989 1333 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms